RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 ZNF592Q92610 1267 aa8.77□□□□□ -1.01
CTNNA1-244ENST00000627109 NECTIN2Q92692 538 aa8.77□□□□□ -1.01
CTNNA1-244ENST00000627109 AFDNP55196 1824 aaKnown RBP8.77□□□□□ -1.01
CTNNA1-244ENST00000627109 MX1P20591 662 aa8.77□□□□□ -1.01
CTNNA1-244ENST00000627109 TJP1Q07157 1748 aa8.77□□□□□ -1.01
CTNNA1-244ENST00000627109 CHMLP26374 656 aa8.76□□□□□ -1.01
CTNNA1-244ENST00000627109 NUCB2P80303 420 aa8.76□□□□□ -1.01
CTNNA1-244ENST00000627109 KLHL40Q2TBA0 621 aa8.76□□□□□ -1.01
CTNNA1-244ENST00000627109 AMOTQ4VCS5 1084 aa8.76□□□□□ -1.01
CTNNA1-244ENST00000627109 PI4K2BQ8TCG2 481 aa8.76□□□□□ -1.01
CTNNA1-244ENST00000627109 DDX54Q8TDD1 881 aaKnown RBP8.76□□□□□ -1.01
CTNNA1-244ENST00000627109 BAG4O95429 457 aaKnown RBP8.76□□□□□ -1.01
CTNNA1-244ENST00000627109 MCM2P49736 904 aa8.76□□□□□ -1.01
CTNNA1-244ENST00000627109 ANKRD24Q8TF21 1146 aa8.76□□□□□ -1.01
CTNNA1-244ENST00000627109 PRDM10Q9NQV6 1147 aa8.76□□□□□ -1.01
CTNNA1-244ENST00000627109 ZDHHC9Q9Y397 364 aa8.76□□□□□ -1.01
CTNNA1-244ENST00000627109 AFF2P51816 1311 aa8.75□□□□□ -1.01
CTNNA1-244ENST00000627109 INTS4Q96HW7 963 aaKnown RBP8.75□□□□□ -1.01
CTNNA1-244ENST00000627109 SNRKQ9NRH2 765 aa8.75□□□□□ -1.01
CTNNA1-244ENST00000627109 AXIN2Q9Y2T1 843 aa8.75□□□□□ -1.01
CTNNA1-244ENST00000627109 FAM98CQ17RN3 349 aaKnown RBP8.75□□□□□ -1.01
CTNNA1-244ENST00000627109 LARP1Q6PKG0 1096 aaKnown RBP8.75□□□□□ -1.01
CTNNA1-244ENST00000627109 KCNB2Q92953 911 aa8.75□□□□□ -1.01
CTNNA1-244ENST00000627109 SYTL4Q96C24 671 aaPredicted RBP8.75□□□□□ -1.01
CTNNA1-244ENST00000627109 SSFA2P28290 1259 aa8.75□□□□□ -1.01
CTNNA1-244ENST00000627109 ZNF445P59923 1031 aa8.75□□□□□ -1.01
CTNNA1-244ENST00000627109 FKBP5Q13451 457 aaPredicted RBP8.75□□□□□ -1.01
CTNNA1-244ENST00000627109 RAPGEF4Q8WZA2 1011 aa8.75□□□□□ -1.01
CTNNA1-244ENST00000627109 LRRFIP2Q9Y608 721 aaKnown RBP8.75□□□□□ -1.01
CTNNA1-244ENST00000627109 KAT6BQ8WYB5 2073 aa8.75□□□□□ -1.01
CTNNA1-244ENST00000627109 KDM6AO15550 1401 aaPredicted RBP8.74□□□□□ -1.01
CTNNA1-244ENST00000627109 ST18O60284 1047 aa8.74□□□□□ -1.01
CTNNA1-244ENST00000627109 FAM182BQ5T319 152 aa8.74□□□□□ -1.01
CTNNA1-244ENST00000627109 GRPEL1Q9HAV7 217 aa8.74□□□□□ -1.01
CTNNA1-244ENST00000627109 TNS3Q68CZ2 1445 aa8.74□□□□□ -1.01
CTNNA1-244ENST00000627109 RNMTO43148 476 aaKnown RBP8.74□□□□□ -1.01
CTNNA1-244ENST00000627109 ALDH1L1O75891 902 aa8.74□□□□□ -1.01
CTNNA1-244ENST00000627109 HDGFL1Q5TGJ6 251 aa8.74□□□□□ -1.01
CTNNA1-244ENST00000627109 PHAXQ9H814 394 aaKnown RBP8.74□□□□□ -1.01
CTNNA1-244ENST00000627109 LMBRD1Q9NUN5 540 aa8.74□□□□□ -1.01
CTNNA1-244ENST00000627109 TTC41PQ6P2S7 1318 aa8.73□□□□□ -1.01
CTNNA1-244ENST00000627109 DDX60Q8IY21 1712 aaKnown RBP8.73□□□□□ -1.01
CTNNA1-244ENST00000627109 GOLGA6L22H0YM25 854 aa8.73□□□□□ -1.01
CTNNA1-244ENST00000627109 HSPA4P34932 840 aa8.73□□□□□ -1.01
CTNNA1-244ENST00000627109 LGR6Q9HBX8 967 aa8.73□□□□□ -1.01
CTNNA1-244ENST00000627109 MTMR7Q9Y216 660 aa8.73□□□□□ -1.01
CTNNA1-244ENST00000627109 EXOC6BQ9Y2D4 811 aa8.73□□□□□ -1.01
CTNNA1-244ENST00000627109 UBTFL1P0CB47 393 aaPredicted RBP8.73□□□□□ -1.01
CTNNA1-244ENST00000627109 NOL8Q76FK4 1167 aaKnown RBP8.73□□□□□ -1.01
CTNNA1-244ENST00000627109 GAS2L3Q86XJ1 694 aa8.73□□□□□ -1.01
CTNNA1-244ENST00000627109 PLEKHO1Q53GL0 409 aaPredicted RBP8.72□□□□□ -1.01
CTNNA1-244ENST00000627109 DNAAF4Q8WXU2 420 aa8.72□□□□□ -1.01
CTNNA1-244ENST00000627109 PPP1R9BQ96SB3 815 aa8.72□□□□□ -1.01
CTNNA1-244ENST00000627109 SPATA31A6Q5VVP1 1343 aa8.72□□□□□ -1.01
CTNNA1-244ENST00000627109 GIGYF1O75420 1035 aaPredicted RBP8.72□□□□□ -1.01
CTNNA1-244ENST00000627109 TRIM44Q96DX7 344 aaPredicted RBP8.72□□□□□ -1.01
CTNNA1-244ENST00000627109 RAD50Q92878 1312 aa8.72□□□□□ -1.01
CTNNA1-244ENST00000627109 UNC5CLQ8IV45 518 aa8.72□□□□□ -1.01
CTNNA1-244ENST00000627109 KIF1BPQ96EK5 621 aa8.72□□□□□ -1.01
CTNNA1-244ENST00000627109 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.72□□□□□ -1.012e-8■□□□□ 11.2
CTNNA1-244ENST00000627109 CHPF2Q9P2E5 772 aa8.72□□□□□ -1.01
CTNNA1-244ENST00000627109 SPEF2Q9C093 1822 aa8.72□□□□□ -1.01
CTNNA1-244ENST00000627109 BRD1O95696 1058 aa8.71□□□□□ -1.01
CTNNA1-244ENST00000627109 PDIA6Q15084 440 aa8.71□□□□□ -1.01
CTNNA1-244ENST00000627109 LRP10Q7Z4F1 713 aa8.71□□□□□ -1.01
CTNNA1-244ENST00000627109 PPP1R42Q7Z4L9 355 aa8.71□□□□□ -1.01
CTNNA1-244ENST00000627109 RHPN1Q8TCX5 695 aa8.71□□□□□ -1.01
CTNNA1-244ENST00000627109 ANP32BQ92688 251 aaKnown RBP8.71□□□□□ -1.01
CTNNA1-244ENST00000627109 TTC14Q96N46 770 aa8.71□□□□□ -1.01
CTNNA1-244ENST00000627109 IL25Q9H293 177 aa8.71□□□□□ -1.01
CTNNA1-244ENST00000627109 DBF4Q9UBU7 674 aaPredicted RBP8.71□□□□□ -1.01
CTNNA1-244ENST00000627109 PPP1R1BQ9UD71 204 aaPredicted RBP8.71□□□□□ -1.01
CTNNA1-244ENST00000627109 CPDO75976 1380 aa8.71□□□□□ -1.02
CTNNA1-244ENST00000627109 ZFP91Q96JP5 570 aaPredicted RBP8.71□□□□□ -1.02
CTNNA1-244ENST00000627109 MEGF6O75095 1541 aa8.71□□□□□ -1.02
CTNNA1-244ENST00000627109 ERBB3P21860 1342 aa8.71□□□□□ -1.02
CTNNA1-244ENST00000627109 MYH15Q9Y2K3 1946 aa8.71□□□□□ -1.02
CTNNA1-244ENST00000627109 SGSM2O43147 1006 aa8.71□□□□□ -1.02
CTNNA1-244ENST00000627109 HSP90AB4PQ58FF6 505 aa8.71□□□□□ -1.02
CTNNA1-244ENST00000627109 PANK2Q9BZ23 570 aa8.71□□□□□ -1.02
CTNNA1-244ENST00000627109 LSG1Q9H089 658 aaKnown RBP8.71□□□□□ -1.02
CTNNA1-244ENST00000627109 RRAGDQ9NQL2 400 aaPredicted RBP8.71□□□□□ -1.02
CTNNA1-244ENST00000627109 PALD1Q9ULE6 856 aa8.71□□□□□ -1.02
CTNNA1-244ENST00000627109 KCNQ3O43525 872 aa8.7□□□□□ -1.02
CTNNA1-244ENST00000627109 NBPF7P0C2Y1 421 aaPredicted RBP8.7□□□□□ -1.02
CTNNA1-244ENST00000627109 RXRBP28702 533 aa8.7□□□□□ -1.02
CTNNA1-244ENST00000627109 TMX3Q96JJ7 454 aa8.7□□□□□ -1.02
CTNNA1-244ENST00000627109 TRPC5Q9UL62 973 aaPredicted RBP8.7□□□□□ -1.02
CTNNA1-244ENST00000627109 ROBO1Q9Y6N7 1651 aa8.7□□□□□ -1.02
CTNNA1-244ENST00000627109 TRIM6-TRIM34B2RNG4 842 aa8.7□□□□□ -1.02
CTNNA1-244ENST00000627109 ZNF772Q68DY9 489 aaPredicted RBP8.7□□□□□ -1.02
CTNNA1-244ENST00000627109 ZGPATQ8N5A5 531 aaKnown RBP8.7□□□□□ -1.02
CTNNA1-244ENST00000627109 CLCN1P35523 988 aa8.7□□□□□ -1.02
CTNNA1-244ENST00000627109 PKP1Q13835 747 aa8.7□□□□□ -1.02
CTNNA1-244ENST00000627109 KSR2Q6VAB6 950 aa8.7□□□□□ -1.02
CTNNA1-244ENST00000627109 TMEM87AQ8NBN3 555 aa8.7□□□□□ -1.02
CTNNA1-244ENST00000627109 RPAP1Q9BWH6 1393 aaPredicted RBP8.69□□□□□ -1.02
CTNNA1-244ENST00000627109 BTBD11A6QL63 1104 aa8.69□□□□□ -1.02
CTNNA1-244ENST00000627109 EXOC5O00471 708 aa8.69□□□□□ -1.02
CTNNA1-244ENST00000627109 TATP17735 454 aaPredicted RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms