RNA–Protein interactions for RNA: ENST00000625778.2

UBE3A-209, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 3,217 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-209ENST00000625778 PPFIA3O75145 1194 aa16.51■□□□□ 0.23
UBE3A-209ENST00000625778 HDGFL1Q5TGJ6 251 aa16.51■□□□□ 0.23
UBE3A-209ENST00000625778 TMEM87AQ8NBN3 555 aa16.51■□□□□ 0.23
UBE3A-209ENST00000625778 CYP46A1Q9Y6A2 500 aa16.51■□□□□ 0.23
UBE3A-209ENST00000625778 SOS1Q07889 1333 aaPredicted RBP16.5■□□□□ 0.23
UBE3A-209ENST00000625778 PIK3C2BO00750 1634 aa16.5■□□□□ 0.23
UBE3A-209ENST00000625778 KLHL34Q8N239 644 aa16.5■□□□□ 0.23
UBE3A-209ENST00000625778 FAM200AQ8TCP9 573 aa16.5■□□□□ 0.23
UBE3A-209ENST00000625778 TTC14Q96N46 770 aa16.5■□□□□ 0.23
UBE3A-209ENST00000625778 CPS1P31327 1500 aa16.5■□□□□ 0.23
UBE3A-209ENST00000625778 A0A087WWV3 80 aa16.5■□□□□ 0.23
UBE3A-209ENST00000625778 KRT85P78386 507 aa16.5■□□□□ 0.23
UBE3A-209ENST00000625778 COL9A3Q14050 684 aaPredicted RBP16.5■□□□□ 0.23
UBE3A-209ENST00000625778 ME3Q16798 604 aa16.5■□□□□ 0.23
UBE3A-209ENST00000625778 DNAJC25Q9H1X3 360 aa16.5■□□□□ 0.23
UBE3A-209ENST00000625778 STAP2Q9UGK3 403 aa16.5■□□□□ 0.23
UBE3A-209ENST00000625778 NBPF7P0C2Y1 421 aaPredicted RBP16.49■□□□□ 0.23
UBE3A-209ENST00000625778 IPO4Q8TEX9 1081 aaKnown RBP16.49■□□□□ 0.23
UBE3A-209ENST00000625778 FUCA2Q9BTY2 467 aa16.49■□□□□ 0.23
UBE3A-209ENST00000625778 GTPBP4Q9BZE4 634 aaKnown RBP16.49■□□□□ 0.23
UBE3A-209ENST00000625778 HYPKQ9NX55 129 aa16.49■□□□□ 0.23
UBE3A-209ENST00000625778 HECW2Q9P2P5 1572 aa16.49■□□□□ 0.23
UBE3A-209ENST00000625778 RAB11FIP3O75154 756 aa16.49■□□□□ 0.23
UBE3A-209ENST00000625778 CBX8Q9HC52 389 aa16.49■□□□□ 0.23
UBE3A-209ENST00000625778 TRMT1Q9NXH9 659 aaKnown RBP16.49■□□□□ 0.23
UBE3A-209ENST00000625778 NCBP1Q09161 790 aaKnown RBP16.49■□□□□ 0.23
UBE3A-209ENST00000625778 C14orf37Q86TY3 774 aa16.49■□□□□ 0.23
UBE3A-209ENST00000625778 PI4K2BQ8TCG2 481 aa16.49■□□□□ 0.23
UBE3A-209ENST00000625778 TAOK2Q9UL54 1235 aa16.49■□□□□ 0.23
UBE3A-209ENST00000625778 CDC42BPGQ6DT37 1551 aa16.49■□□□□ 0.23
UBE3A-209ENST00000625778 CCDC112Q8NEF3 446 aa16.48■□□□□ 0.23
UBE3A-209ENST00000625778 MRVI1Q9Y6F6 885 aa16.48■□□□□ 0.23
UBE3A-209ENST00000625778 USHBP1Q8N6Y0 703 aa16.48■□□□□ 0.23
UBE3A-209ENST00000625778 DDX11Q96FC9 970 aa16.48■□□□□ 0.23
UBE3A-209ENST00000625778 SPATA32Q96LK8 384 aa16.48■□□□□ 0.23
UBE3A-209ENST00000625778 PA2G4Q9UQ80 394 aaKnown RBP16.48■□□□□ 0.23
UBE3A-209ENST00000625778 ACEP12821 1306 aa16.48■□□□□ 0.23
UBE3A-209ENST00000625778 TTC21BQ7Z4L5 1316 aa16.48■□□□□ 0.23
UBE3A-209ENST00000625778 DLG5Q8TDM6 1919 aa16.47■□□□□ 0.23
UBE3A-209ENST00000625778 PRR36Q9H6K5 1346 aa16.47■□□□□ 0.23
UBE3A-209ENST00000625778 ARID5BQ14865 1188 aa16.47■□□□□ 0.23
UBE3A-209ENST00000625778 TAF7Q15545 349 aaPredicted RBP16.47■□□□□ 0.23
UBE3A-209ENST00000625778 FILIP1Q7Z7B0 1213 aa16.47■□□□□ 0.23
UBE3A-209ENST00000625778 CLIP2Q9UDT6 1046 aa16.47■□□□□ 0.23
UBE3A-209ENST00000625778 KIF20BQ96Q89 1820 aa16.47■□□□□ 0.23
UBE3A-209ENST00000625778 ZKSCAN1P17029 563 aaPredicted RBP16.47■□□□□ 0.23
UBE3A-209ENST00000625778 KIF1BPQ96EK5 621 aa16.47■□□□□ 0.23
UBE3A-209ENST00000625778 ATP7BP35670 1465 aa16.47■□□□□ 0.23
UBE3A-209ENST00000625778 AATKQ6ZMQ8 1374 aa16.46■□□□□ 0.23
UBE3A-209ENST00000625778 TPCN1Q9ULQ1 816 aa16.46■□□□□ 0.23
UBE3A-209ENST00000625778 ANKRD26Q9UPS8 1709 aa16.46■□□□□ 0.23
UBE3A-209ENST00000625778 TPM3P06753 285 aa16.46■□□□□ 0.23
UBE3A-209ENST00000625778 SYTL4Q96C24 671 aaPredicted RBP16.46■□□□□ 0.23
UBE3A-209ENST00000625778 ALKQ9UM73 1620 aa16.46■□□□□ 0.22
UBE3A-209ENST00000625778 SSH2Q76I76 1423 aa16.46■□□□□ 0.22
UBE3A-209ENST00000625778 ZNF165P49910 485 aa16.45■□□□□ 0.22
UBE3A-209ENST00000625778 EYA1Q99502 592 aa16.45■□□□□ 0.22
UBE3A-209ENST00000625778 CCDC9Q9Y3X0 531 aaKnown RBP16.45■□□□□ 0.22
UBE3A-209ENST00000625778 CRB1P82279 1406 aa16.45■□□□□ 0.22
UBE3A-209ENST00000625778 IFIT2P09913 472 aaKnown RBP16.45■□□□□ 0.22
UBE3A-209ENST00000625778 FAM227BQ96M60 508 aa16.45■□□□□ 0.22
UBE3A-209ENST00000625778 METP08581 1390 aa16.45■□□□□ 0.22
UBE3A-209ENST00000625778 MLH3Q9UHC1 1453 aa16.45■□□□□ 0.22
UBE3A-209ENST00000625778 CHMP4CQ96CF2 233 aa16.45■□□□□ 0.22
UBE3A-209ENST00000625778 ERCC4Q92889 916 aaPredicted RBP16.44■□□□□ 0.22
UBE3A-209ENST00000625778 ST3GAL1Q11201 340 aa16.44■□□□□ 0.22
UBE3A-209ENST00000625778 ZSCAN25Q6NSZ9 544 aa16.44■□□□□ 0.22
UBE3A-209ENST00000625778 LARP1Q6PKG0 1096 aaKnown RBP16.44■□□□□ 0.22
UBE3A-209ENST00000625778 CLASRPQ8N2M8 674 aaKnown RBP16.44■□□□□ 0.22
UBE3A-209ENST00000625778 CACTINQ8WUQ7 758 aaKnown RBP16.44■□□□□ 0.22
UBE3A-209ENST00000625778 RUFY2Q8WXA3 655 aa16.44■□□□□ 0.22
UBE3A-209ENST00000625778 ANKRD7Q92527 254 aa16.44■□□□□ 0.22
UBE3A-209ENST00000625778 RBM8AQ9Y5S9 174 aaKnown RBP16.44■□□□□ 0.22
UBE3A-209ENST00000625778 PI4KAP2A4QPH2 592 aa16.43■□□□□ 0.22
UBE3A-209ENST00000625778 GOLGA6L19H0YKK7 550 aa16.43■□□□□ 0.22
UBE3A-209ENST00000625778 NR1I2O75469 434 aa16.43■□□□□ 0.22
UBE3A-209ENST00000625778 PI4KAP1Q8N8J0 262 aa16.43■□□□□ 0.22
UBE3A-209ENST00000625778 SSH3Q8TE77 659 aa16.43■□□□□ 0.22
UBE3A-209ENST00000625778 CCDC8Q9H0W5 538 aaPredicted RBP16.43■□□□□ 0.22
UBE3A-209ENST00000625778 SIL1Q9H173 461 aa16.43■□□□□ 0.22
UBE3A-209ENST00000625778 MYO5BQ9ULV0 1848 aa16.43■□□□□ 0.22
UBE3A-209ENST00000625778 HSP90B1P14625 803 aaKnown RBP16.43■□□□□ 0.22
UBE3A-209ENST00000625778 ZNF75DP51815 510 aa16.43■□□□□ 0.22
UBE3A-209ENST00000625778 CCDC144BQ3MJ40 725 aa16.43■□□□□ 0.22
UBE3A-209ENST00000625778 AACSQ86V21 672 aa16.43■□□□□ 0.22
UBE3A-209ENST00000625778 CCDC144CPQ8IYA2 1237 aa16.43■□□□□ 0.22
UBE3A-209ENST00000625778 KIF20AO95235 890 aa16.42■□□□□ 0.22
UBE3A-209ENST00000625778 NGDNQ8NEJ9 315 aaKnown RBP16.42■□□□□ 0.22
UBE3A-209ENST00000625778 USP27XA6NNY8 438 aa16.42■□□□□ 0.22
UBE3A-209ENST00000625778 TAF6LQ9Y6J9 622 aa16.42■□□□□ 0.22
UBE3A-209ENST00000625778 GNAT3A8MTJ3 354 aa16.41■□□□□ 0.22
UBE3A-209ENST00000625778 GLRX3O76003 335 aaKnown RBP16.41■□□□□ 0.22
UBE3A-209ENST00000625778 CEP135Q66GS9 1140 aa16.41■□□□□ 0.22
UBE3A-209ENST00000625778 VPS53Q5VIR6 699 aa16.41■□□□□ 0.22
UBE3A-209ENST00000625778 LRRC2Q9BYS8 371 aa16.41■□□□□ 0.22
UBE3A-209ENST00000625778 BOLA2Q9H3K6 86 aa16.41■□□□□ 0.22
UBE3A-209ENST00000625778 C9orf78Q9NZ63 289 aaPredicted RBP16.41■□□□□ 0.22
UBE3A-209ENST00000625778 USP16Q9Y5T5 823 aa16.41■□□□□ 0.22
UBE3A-209ENST00000625778 SMTNL1A8MU46 457 aa16.41■□□□□ 0.22
UBE3A-209ENST00000625778 H3BQV1 296 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms