RNA–Protein interactions for RNA: ENST00000625681.2

UBE3A-208, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5

Gene UBE3A, Length 654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-208ENST00000625681 ANKRD31Q8N7Z5 1873 aa30.38■■■□□ 2.45
UBE3A-208ENST00000625681 DZIP3Q86Y13 1208 aaKnown RBP30.38■■■□□ 2.45
UBE3A-208ENST00000625681 USP16Q9Y5T5 823 aa30.37■■■□□ 2.45
UBE3A-208ENST00000625681 BTBD11A6QL63 1104 aa30.36■■■□□ 2.45
UBE3A-208ENST00000625681 PHACTR3Q96KR7 559 aa30.36■■■□□ 2.45
UBE3A-208ENST00000625681 PRAMEF22A3QJZ6 481 aa30.35■■■□□ 2.45
UBE3A-208ENST00000625681 NBPF5PQ86XG9 351 aaPredicted RBP30.34■■■□□ 2.45
UBE3A-208ENST00000625681 C7orf43Q8WVR3 580 aa30.34■■■□□ 2.45
UBE3A-208ENST00000625681 COL11A2P13942 1736 aaPredicted RBP30.33■■■□□ 2.45
UBE3A-208ENST00000625681 SOGA3Q5TF21 947 aa30.33■■■□□ 2.45
UBE3A-208ENST00000625681 OLFM4Q6UX06 510 aa30.33■■■□□ 2.45
UBE3A-208ENST00000625681 VIRMAQ69YN4 1812 aaKnown RBP30.32■■■□□ 2.44
UBE3A-208ENST00000625681 FOXN1O15353 648 aa30.32■■■□□ 2.44
UBE3A-208ENST00000625681 TAF1DQ9H5J8 278 aaPredicted RBP30.32■■■□□ 2.44
UBE3A-208ENST00000625681 IQCA1LA6NCM1 817 aa30.31■■■□□ 2.44
UBE3A-208ENST00000625681 PASKQ96RG2 1323 aa30.3■■■□□ 2.44
UBE3A-208ENST00000625681 FER1L6Q2WGJ9 1857 aa30.3■■■□□ 2.44
UBE3A-208ENST00000625681 LDHDQ86WU2 507 aa30.3■■■□□ 2.44
UBE3A-208ENST00000625681 ZNF277Q9NRM2 450 aaPredicted RBP30.3■■■□□ 2.44
UBE3A-208ENST00000625681 SLX4Q8IY92 1834 aa30.3■■■□□ 2.44
UBE3A-208ENST00000625681 COL3A1P02461 1466 aaPredicted RBP30.3■■■□□ 2.44
UBE3A-208ENST00000625681 SCN7AQ01118 1682 aa30.3■■■□□ 2.44
UBE3A-208ENST00000625681 CNTNAP1P78357 1384 aa30.29■■■□□ 2.44
UBE3A-208ENST00000625681 CEMIPQ8WUJ3 1361 aa30.29■■■□□ 2.44
UBE3A-208ENST00000625681 EAPPQ56P03 285 aaPredicted RBP30.29■■■□□ 2.44
UBE3A-208ENST00000625681 L3MBTL3Q96JM7 780 aaPredicted RBP30.29■■■□□ 2.44
UBE3A-208ENST00000625681 FAM177BA6PVY3 158 aa30.28■■■□□ 2.44
UBE3A-208ENST00000625681 CCDC93Q567U6 631 aa30.28■■■□□ 2.44
UBE3A-208ENST00000625681 ZNF541Q9H0D2 1346 aa30.27■■■□□ 2.44
UBE3A-208ENST00000625681 ITGBL1O95965 494 aaPredicted RBP30.27■■■□□ 2.44
UBE3A-208ENST00000625681 NPR1P16066 1061 aa30.27■■■□□ 2.44
UBE3A-208ENST00000625681 PRKAR2BP31323 418 aa30.27■■■□□ 2.44
UBE3A-208ENST00000625681 VEGFBP49765 207 aa30.27■■■□□ 2.44
UBE3A-208ENST00000625681 CLEC4GQ6UXB4 293 aa30.26■■■□□ 2.43
UBE3A-208ENST00000625681 CLEC11AQ9Y240 323 aa30.26■■■□□ 2.43
UBE3A-208ENST00000625681 FKBP4Q02790 459 aaKnown RBP eCLIP30.25■■■□□ 2.43
UBE3A-208ENST00000625681 KLRG2A4D1S0 409 aaPredicted RBP30.24■■■□□ 2.43
UBE3A-208ENST00000625681 TMEM88BA6NKF7 163 aa30.24■■■□□ 2.43
UBE3A-208ENST00000625681 MCM10Q7L590 875 aa30.24■■■□□ 2.43
UBE3A-208ENST00000625681 RSPH6AQ9H0K4 717 aa30.24■■■□□ 2.43
UBE3A-208ENST00000625681 NIP7Q9Y221 180 aaKnown RBP eCLIP30.24■■■□□ 2.43
UBE3A-208ENST00000625681 SNRPA1P09661 255 aaKnown RBP30.23■■■□□ 2.43
UBE3A-208ENST00000625681 TPTE2Q6XPS3 522 aa30.23■■■□□ 2.43
UBE3A-208ENST00000625681 ZNF652Q9Y2D9 606 aa30.23■■■□□ 2.43
UBE3A-208ENST00000625681 DICER1Q9UPY3 1922 aaKnown RBP30.23■■■□□ 2.43
UBE3A-208ENST00000625681 NBPF26B4DH59 902 aa30.22■■■□□ 2.43
UBE3A-208ENST00000625681 NBPF10Q6P3W6 841 aaKnown RBP30.22■■■□□ 2.43
UBE3A-208ENST00000625681 NBPF15Q8N660 670 aa30.22■■■□□ 2.43
UBE3A-208ENST00000625681 HACL1Q9UJ83 578 aa30.22■■■□□ 2.43
UBE3A-208ENST00000625681 EPHX2P34913 555 aa30.2■■■□□ 2.43
UBE3A-208ENST00000625681 DCTN1Q14203 1278 aa30.2■■■□□ 2.43
UBE3A-208ENST00000625681 AIDAQ96BJ3 306 aa30.2■■■□□ 2.43
UBE3A-208ENST00000625681 PRDM10Q9NQV6 1147 aa30.2■■■□□ 2.43
UBE3A-208ENST00000625681 SIPA1L3O60292 1781 aaPredicted RBP30.19■■■□□ 2.42
UBE3A-208ENST00000625681 CTCFP49711 727 aaPredicted RBP30.19■■■□□ 2.42
UBE3A-208ENST00000625681 HLFQ16534 295 aa30.19■■■□□ 2.42
UBE3A-208ENST00000625681 MAP1SQ66K74 1059 aaPredicted RBP30.19■■■□□ 2.42
UBE3A-208ENST00000625681 RTKN2Q8IZC4 609 aa30.19■■■□□ 2.42
UBE3A-208ENST00000625681 SYNE4Q8N205 404 aa30.19■■■□□ 2.42
UBE3A-208ENST00000625681 RNF123Q5XPI4 1314 aa30.19■■■□□ 2.42
UBE3A-208ENST00000625681 CNTROBQ8N137 903 aa30.17■■■□□ 2.42
UBE3A-208ENST00000625681 RTF1Q92541 710 aaKnown RBP30.17■■■□□ 2.42
UBE3A-208ENST00000625681 NPC1L1Q9UHC9 1359 aa30.16■■■□□ 2.42
UBE3A-208ENST00000625681 FZD9O00144 591 aa30.16■■■□□ 2.42
UBE3A-208ENST00000625681 IARSP41252 1262 aaKnown RBP30.16■■■□□ 2.42
UBE3A-208ENST00000625681 WBP1LQ9NX94 342 aa30.16■■■□□ 2.42
UBE3A-208ENST00000625681 GTF2E1P29083 439 aaPredicted RBP30.15■■■□□ 2.42
UBE3A-208ENST00000625681 LBX1P52954 281 aa30.15■■■□□ 2.42
UBE3A-208ENST00000625681 MIS18AQ9NYP9 233 aa30.15■■■□□ 2.42
UBE3A-208ENST00000625681 ALDH1B1P30837 517 aa30.14■■■□□ 2.42
UBE3A-208ENST00000625681 CFAP53Q96M91 514 aa30.14■■■□□ 2.42
UBE3A-208ENST00000625681 CACNA1SQ13698 1873 aa30.13■■■□□ 2.41
UBE3A-208ENST00000625681 U2AF1L5P0DN76 240 aaPredicted RBP30.13■■■□□ 2.41
UBE3A-208ENST00000625681 U2AF1Q01081 240 aaKnown RBP eCLIP30.13■■■□□ 2.41
UBE3A-208ENST00000625681 DEFB115Q30KQ5 88 aa30.13■■■□□ 2.41
UBE3A-208ENST00000625681 PNMA8AQ86V59 439 aaPredicted RBP30.13■■■□□ 2.41
UBE3A-208ENST00000625681 NGEFQ8N5V2 710 aa30.13■■■□□ 2.41
UBE3A-208ENST00000625681 BCORQ6W2J9 1755 aa30.12■■■□□ 2.41
UBE3A-208ENST00000625681 NUTM1Q86Y26 1132 aa30.11■■■□□ 2.41
UBE3A-208ENST00000625681 NUDCQ9Y266 331 aa30.11■■■□□ 2.41
UBE3A-208ENST00000625681 RASSF10A6NK89 507 aa30.1■■■□□ 2.41
UBE3A-208ENST00000625681 GPC2Q8N158 579 aa30.1■■■□□ 2.41
UBE3A-208ENST00000625681 GJA3Q9Y6H8 435 aa30.1■■■□□ 2.41
UBE3A-208ENST00000625681 JDP2Q8WYK2 163 aa30.09■■■□□ 2.41
UBE3A-208ENST00000625681 SCN4AP35499 1836 aa30.08■■■□□ 2.41
UBE3A-208ENST00000625681 FMR1Q06787 632 aaKnown RBP eCLIP30.08■■■□□ 2.412e-6■■■□□ 17.3
UBE3A-208ENST00000625681 ABT1Q9ULW3 272 aaKnown RBP30.08■■■□□ 2.41
UBE3A-208ENST00000625681 ARFGEF2Q9Y6D5 1785 aa30.08■■■□□ 2.41
UBE3A-208ENST00000625681 WDR33Q9C0J8 1336 aaKnown RBP30.07■■■□□ 2.4
UBE3A-208ENST00000625681 RGL2O15211 777 aa30.07■■■□□ 2.4
UBE3A-208ENST00000625681 TAF7Q15545 349 aaPredicted RBP30.07■■■□□ 2.4
UBE3A-208ENST00000625681 SLC51AQ86UW1 340 aa30.07■■■□□ 2.4
UBE3A-208ENST00000625681 PSMD1Q99460 953 aa30.06■■■□□ 2.4
UBE3A-208ENST00000625681 HSPA8P11142 646 aaKnown RBP30.05■■■□□ 2.4
UBE3A-208ENST00000625681 ZEB1P37275 1124 aaPredicted RBP30.05■■■□□ 2.4
UBE3A-208ENST00000625681 CRY2Q49AN0 593 aa30.05■■■□□ 2.4
UBE3A-208ENST00000625681 ABCC12Q96J65 1359 aa30.04■■■□□ 2.4
UBE3A-208ENST00000625681 TCERG1O14776 1098 aaKnown RBP30.04■■■□□ 2.4
UBE3A-208ENST00000625681 EIF6P56537 245 aaKnown RBP30.04■■■□□ 2.4
UBE3A-208ENST00000625681 DDX21Q9NR30 783 aaKnown RBP eCLIP30.04■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms