RNA–Protein interactions for RNA: ENST00000625275.2

R3HCC1-210, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-210ENST00000625275 APAF1O14727 1248 aa26.11■■□□□ 1.77
R3HCC1-210ENST00000625275 KIF3CO14782 793 aa26.11■■□□□ 1.77
R3HCC1-210ENST00000625275 TTLL6Q8N841 843 aa26.11■■□□□ 1.77
R3HCC1-210ENST00000625275 NBPF26B4DH59 902 aa26.1■■□□□ 1.77
R3HCC1-210ENST00000625275 NBPF10Q6P3W6 841 aaKnown RBP26.1■■□□□ 1.77
R3HCC1-210ENST00000625275 NBPF15Q8N660 670 aa26.1■■□□□ 1.77
R3HCC1-210ENST00000625275 CNBD1Q8NA66 436 aa26.1■■□□□ 1.77
R3HCC1-210ENST00000625275 THUMPD2Q9BTF0 503 aaKnown RBP26.1■■□□□ 1.77
R3HCC1-210ENST00000625275 BRIP1Q9BX63 1249 aa26.1■■□□□ 1.77
R3HCC1-210ENST00000625275 PDZRN3Q9UPQ7 1066 aa26.1■■□□□ 1.77
R3HCC1-210ENST00000625275 SLX4Q8IY92 1834 aa26.09■■□□□ 1.77
R3HCC1-210ENST00000625275 PDE6BP35913 854 aa26.09■■□□□ 1.77
R3HCC1-210ENST00000625275 TMPOP42166 694 aaKnown RBP26.09■■□□□ 1.77
R3HCC1-210ENST00000625275 RNF181Q9P0P0 153 aa26.09■■□□□ 1.77
R3HCC1-210ENST00000625275 ZNF652Q9Y2D9 606 aa26.09■■□□□ 1.77
R3HCC1-210ENST00000625275 CLEC4GQ6UXB4 293 aa26.08■■□□□ 1.77
R3HCC1-210ENST00000625275 RRP7AQ9Y3A4 280 aaKnown RBP26.08■■□□□ 1.77
R3HCC1-210ENST00000625275 NPHP1O15259 732 aa26.07■■□□□ 1.76
R3HCC1-210ENST00000625275 CCDC24Q8N4L8 307 aa26.07■■□□□ 1.76
R3HCC1-210ENST00000625275 RGL2O15211 777 aa26.05■■□□□ 1.76
R3HCC1-210ENST00000625275 ST5P78524 1137 aa26.05■■□□□ 1.76
R3HCC1-210ENST00000625275 RASSF7Q02833 373 aa26.05■■□□□ 1.76
R3HCC1-210ENST00000625275 NEUROD2Q15784 382 aa26.05■■□□□ 1.76
R3HCC1-210ENST00000625275 EIF4A1P60842 406 aaKnown RBP26.04■■□□□ 1.76
R3HCC1-210ENST00000625275 RIPK4P57078 832 aa26.04■■□□□ 1.76
R3HCC1-210ENST00000625275 ZNF622Q969S3 477 aaKnown RBP eCLIP26.04■■□□□ 1.76
R3HCC1-210ENST00000625275 NMRK2Q9NPI5 230 aa26.04■■□□□ 1.76
R3HCC1-210ENST00000625275 NBPF5PQ86XG9 351 aaPredicted RBP26.02■■□□□ 1.76
R3HCC1-210ENST00000625275 ZC3H4Q9UPT8 1303 aaKnown RBP26.02■■□□□ 1.76
R3HCC1-210ENST00000625275 LMNB1P20700 586 aa26.01■■□□□ 1.75
R3HCC1-210ENST00000625275 KDM2BQ8NHM5 1336 aa26.01■■□□□ 1.75
R3HCC1-210ENST00000625275 HSPA6P17066 643 aa26■■□□□ 1.75
R3HCC1-210ENST00000625275 NIP7Q9Y221 180 aaKnown RBP eCLIP26■■□□□ 1.75
R3HCC1-210ENST00000625275 TRIM35Q9UPQ4 493 aa25.99■■□□□ 1.75
R3HCC1-210ENST00000625275 CEP350Q5VT06 3117 aa25.99■■□□□ 1.75
R3HCC1-210ENST00000625275 ANKRD36CQ5JPF3 1778 aa25.99■■□□□ 1.75
R3HCC1-210ENST00000625275 NFKBIEO00221 500 aa25.98■■□□□ 1.75
R3HCC1-210ENST00000625275 TOMM70O94826 608 aa25.98■■□□□ 1.75
R3HCC1-210ENST00000625275 LMOD3Q0VAK6 560 aa25.98■■□□□ 1.75
R3HCC1-210ENST00000625275 STYK1Q6J9G0 422 aa25.98■■□□□ 1.75
R3HCC1-210ENST00000625275 SRGNP10124 158 aa25.98■■□□□ 1.75
R3HCC1-210ENST00000625275 PRELPP51888 382 aa25.98■■□□□ 1.75
R3HCC1-210ENST00000625275 CNKSR1Q969H4 720 aa25.98■■□□□ 1.75
R3HCC1-210ENST00000625275 TSPYL4Q9UJ04 414 aa25.98■■□□□ 1.75
R3HCC1-210ENST00000625275 HLFQ16534 295 aa25.97■■□□□ 1.75
R3HCC1-210ENST00000625275 SALL2Q9Y467 1007 aaPredicted RBP25.97■■□□□ 1.75
R3HCC1-210ENST00000625275 C21orf2O43822 256 aa25.96■■□□□ 1.75
R3HCC1-210ENST00000625275 TPTE2Q6XPS3 522 aa25.96■■□□□ 1.75
R3HCC1-210ENST00000625275 NGEFQ8N5V2 710 aa25.96■■□□□ 1.75
R3HCC1-210ENST00000625275 MASTLQ96GX5 879 aa25.96■■□□□ 1.75
R3HCC1-210ENST00000625275 ERBB4Q15303 1308 aa25.95■■□□□ 1.75
R3HCC1-210ENST00000625275 MAP3K15Q6ZN16 1313 aa25.95■■□□□ 1.75
R3HCC1-210ENST00000625275 ZNF219Q9P2Y4 722 aaPredicted RBP25.95■■□□□ 1.74
R3HCC1-210ENST00000625275 ERVV-1B6SEH8 477 aa25.94■■□□□ 1.74
R3HCC1-210ENST00000625275 CCDC27Q2M243 656 aa25.94■■□□□ 1.74
R3HCC1-210ENST00000625275 NCBP3Q53F19 620 aaKnown RBP25.94■■□□□ 1.74
R3HCC1-210ENST00000625275 PRPF40BQ6NWY9 871 aaKnown RBP25.94■■□□□ 1.74
R3HCC1-210ENST00000625275 KIF6Q6ZMV9 814 aa25.94■■□□□ 1.74
R3HCC1-210ENST00000625275 BABAM1Q9NWV8 329 aa25.94■■□□□ 1.74
R3HCC1-210ENST00000625275 WDR90Q96KV7 1748 aa25.93■■□□□ 1.74
R3HCC1-210ENST00000625275 MYL6BP14649 208 aa25.93■■□□□ 1.74
R3HCC1-210ENST00000625275 FAM177BA6PVY3 158 aa25.92■■□□□ 1.74
R3HCC1-210ENST00000625275 HNRNPUQ00839 825 aaKnown RBP eCLIP25.92■■□□□ 1.74
R3HCC1-210ENST00000625275 TTLL7Q6ZT98 887 aa25.92■■□□□ 1.74
R3HCC1-210ENST00000625275 C16orf71Q8IYS4 520 aaPredicted RBP25.92■■□□□ 1.74
R3HCC1-210ENST00000625275 LTBP3Q9NS15 1303 aa25.92■■□□□ 1.74
R3HCC1-210ENST00000625275 WWC1Q8IX03 1113 aa25.91■■□□□ 1.74
R3HCC1-210ENST00000625275 KLRG2A4D1S0 409 aaPredicted RBP25.91■■□□□ 1.74
R3HCC1-210ENST00000625275 NPR1P16066 1061 aa25.91■■□□□ 1.74
R3HCC1-210ENST00000625275 SOGA3Q5TF21 947 aa25.91■■□□□ 1.74
R3HCC1-210ENST00000625275 RBM46Q8TBY0 533 aaKnown RBP25.91■■□□□ 1.74
R3HCC1-210ENST00000625275 TAOK3Q9H2K8 898 aa25.9■■□□□ 1.74
R3HCC1-210ENST00000625275 RRAGCQ9HB90 399 aa25.9■■□□□ 1.74
R3HCC1-210ENST00000625275 IBTKQ9P2D0 1353 aaPredicted RBP25.89■■□□□ 1.74
R3HCC1-210ENST00000625275 NYXQ9GZU5 481 aa25.89■■□□□ 1.73
R3HCC1-210ENST00000625275 ZBTB3Q9H5J0 574 aa25.89■■□□□ 1.73
R3HCC1-210ENST00000625275 ABCC12Q96J65 1359 aa25.88■■□□□ 1.73
R3HCC1-210ENST00000625275 GLTPD2A6NH11 291 aa25.88■■□□□ 1.73
R3HCC1-210ENST00000625275 GTF2E1P29083 439 aaPredicted RBP25.88■■□□□ 1.73
R3HCC1-210ENST00000625275 ZNF521Q96K83 1311 aa25.88■■□□□ 1.73
R3HCC1-210ENST00000625275 RIC1Q4ADV7 1423 aa25.87■■□□□ 1.73
R3HCC1-210ENST00000625275 LAMB2P55268 1798 aa25.87■■□□□ 1.73
R3HCC1-210ENST00000625275 EIF2S2P20042 333 aaKnown RBP25.86■■□□□ 1.73
R3HCC1-210ENST00000625275 LRP10Q7Z4F1 713 aa25.85■■□□□ 1.73
R3HCC1-210ENST00000625275 UBN2Q6ZU65 1347 aa25.85■■□□□ 1.73
R3HCC1-210ENST00000625275 GPTP24298 496 aa25.85■■□□□ 1.73
R3HCC1-210ENST00000625275 APLP1P51693 650 aa25.85■■□□□ 1.73
R3HCC1-210ENST00000625275 PDIA6Q15084 440 aa25.85■■□□□ 1.73
R3HCC1-210ENST00000625275 ERFEQ4G0M1 354 aa25.85■■□□□ 1.73
R3HCC1-210ENST00000625275 NUTM1Q86Y26 1132 aa25.85■■□□□ 1.73
R3HCC1-210ENST00000625275 C7orf43Q8WVR3 580 aa25.85■■□□□ 1.73
R3HCC1-210ENST00000625275 FSTL1Q12841 308 aa25.84■■□□□ 1.73
R3HCC1-210ENST00000625275 CCDC93Q567U6 631 aa25.84■■□□□ 1.73
R3HCC1-210ENST00000625275 GIGYF2Q6Y7W6 1299 aaKnown RBP25.84■■□□□ 1.73
R3HCC1-210ENST00000625275 CHL1O00533 1208 aa25.83■■□□□ 1.73
R3HCC1-210ENST00000625275 PROSER3Q2NL68 480 aa25.83■■□□□ 1.73
R3HCC1-210ENST00000625275 ZNF34Q8IZ26 560 aa25.83■■□□□ 1.73
R3HCC1-210ENST00000625275 CALD1Q05682 793 aaKnown RBP25.82■■□□□ 1.72
R3HCC1-210ENST00000625275 SCN4AP35499 1836 aa25.82■■□□□ 1.72
R3HCC1-210ENST00000625275 ANXA1P04083 346 aa25.81■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms