RNA–Protein interactions for RNA: ENST00000622494.1

RPRD1B-209, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 3

Gene RPRD1B, Length 469 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-209ENST00000622494 NGDNQ8NEJ9 315 aaKnown RBP7.13□□□□□ -1.27
RPRD1B-209ENST00000622494 CCER1Q8TC90 406 aaPredicted RBP7.13□□□□□ -1.27
RPRD1B-209ENST00000622494 AKAP12Q02952 1782 aa7.13□□□□□ -1.27
RPRD1B-209ENST00000622494 NWD2Q9ULI1 1742 aa7.13□□□□□ -1.27
RPRD1B-209ENST00000622494 PPEF1O14829 653 aaPredicted RBP7.12□□□□□ -1.27
RPRD1B-209ENST00000622494 PER1O15534 1290 aaPredicted RBP7.12□□□□□ -1.27
RPRD1B-209ENST00000622494 F12P00748 615 aaPredicted RBP7.12□□□□□ -1.27
RPRD1B-209ENST00000622494 ZC3H6P61129 1189 aaKnown RBP7.12□□□□□ -1.27
RPRD1B-209ENST00000622494 RBM6P78332 1123 aaKnown RBP7.12□□□□□ -1.27
RPRD1B-209ENST00000622494 SRPK2P78362 688 aaKnown RBP7.12□□□□□ -1.27
RPRD1B-209ENST00000622494 CTDSPL2Q05D32 466 aa7.12□□□□□ -1.27
RPRD1B-209ENST00000622494 BANK1Q8NDB2 785 aa7.12□□□□□ -1.27
RPRD1B-209ENST00000622494 HELBQ8NG08 1087 aaPredicted RBP7.12□□□□□ -1.27
RPRD1B-209ENST00000622494 COL14A1Q05707 1796 aaKnown RBP7.12□□□□□ -1.27
RPRD1B-209ENST00000622494 CDK12Q9NYV4 1490 aaPredicted RBP7.11□□□□□ -1.27
RPRD1B-209ENST00000622494 ROCK2O75116 1388 aaKnown RBP7.11□□□□□ -1.27
RPRD1B-209ENST00000622494 KIAA0232Q92628 1395 aa7.11□□□□□ -1.27
RPRD1B-209ENST00000622494 ZBTB7CA1YPR0 619 aa7.11□□□□□ -1.27
RPRD1B-209ENST00000622494 PLA2G2CQ5R387 149 aa7.11□□□□□ -1.27
RPRD1B-209ENST00000622494 EMID1Q96A84 441 aaPredicted RBP7.11□□□□□ -1.27
RPRD1B-209ENST00000622494 NUDT12Q9BQG2 462 aa7.11□□□□□ -1.27
RPRD1B-209ENST00000622494 TRPC5Q9UL62 973 aaPredicted RBP7.11□□□□□ -1.27
RPRD1B-209ENST00000622494 FCF1Q9Y324 198 aaKnown RBP7.11□□□□□ -1.27
RPRD1B-209ENST00000622494 POLR3AO14802 1390 aaPredicted RBP7.1□□□□□ -1.27
RPRD1B-209ENST00000622494 LMO7Q8WWI1 1683 aa7.1□□□□□ -1.27
RPRD1B-209ENST00000622494 SRCAPQ6ZRS2 3230 aa7.1□□□□□ -1.27
RPRD1B-209ENST00000622494 USP17L8P0C7I0 530 aa7.1□□□□□ -1.27
RPRD1B-209ENST00000622494 CCNYL3P0C7X3 344 aa7.1□□□□□ -1.27
RPRD1B-209ENST00000622494 UNC5CLQ8IV45 518 aa7.1□□□□□ -1.27
RPRD1B-209ENST00000622494 GJD4Q96KN9 370 aaPredicted RBP7.1□□□□□ -1.27
RPRD1B-209ENST00000622494 EVA1BQ9NVM1 165 aa7.1□□□□□ -1.27
RPRD1B-209ENST00000622494 BTG4Q9NY30 223 aa7.1□□□□□ -1.27
RPRD1B-209ENST00000622494 CABP1Q9NZU7 370 aa7.1□□□□□ -1.27
RPRD1B-209ENST00000622494 CCDC9Q9Y3X0 531 aaKnown RBP7.1□□□□□ -1.27
RPRD1B-209ENST00000622494 CAMTA1Q9Y6Y1 1673 aa7.09□□□□□ -1.27
RPRD1B-209ENST00000622494 ARHGEF10O15013 1369 aa7.09□□□□□ -1.27
RPRD1B-209ENST00000622494 GPRASP1Q5JY77 1395 aa7.09□□□□□ -1.27
RPRD1B-209ENST00000622494 AP1G2O75843 785 aa7.09□□□□□ -1.27
RPRD1B-209ENST00000622494 LRRN4Q8WUT4 740 aa7.09□□□□□ -1.27
RPRD1B-209ENST00000622494 STRN4Q9NRL3 753 aa7.09□□□□□ -1.27
RPRD1B-209ENST00000622494 COL18A1P39060 1754 aa7.09□□□□□ -1.27
RPRD1B-209ENST00000622494 MON2Q7Z3U7 1717 aa7.09□□□□□ -1.27
RPRD1B-209ENST00000622494 CD163L1Q9NR16 1453 aa7.09□□□□□ -1.27
RPRD1B-209ENST00000622494 THSD7AQ9UPZ6 1657 aa7.09□□□□□ -1.27
RPRD1B-209ENST00000622494 RGS20O76081 388 aa7.08□□□□□ -1.28
RPRD1B-209ENST00000622494 KCNH2Q12809 1159 aa7.08□□□□□ -1.28
RPRD1B-209ENST00000622494 DEFB132Q7Z7B7 95 aa7.08□□□□□ -1.28
RPRD1B-209ENST00000622494 SEPT12Q8IYM1 358 aa7.08□□□□□ -1.28
RPRD1B-209ENST00000622494 TSC1Q92574 1164 aa7.08□□□□□ -1.28
RPRD1B-209ENST00000622494 USP6P35125 1406 aa7.08□□□□□ -1.28
RPRD1B-209ENST00000622494 SSH2Q76I76 1423 aa7.08□□□□□ -1.28
RPRD1B-209ENST00000622494 TONSLQ96HA7 1378 aa7.08□□□□□ -1.28
RPRD1B-209ENST00000622494 CLSPNQ9HAW4 1339 aa7.07□□□□□ -1.28
RPRD1B-209ENST00000622494 FBLN1P23142 703 aa7.07□□□□□ -1.28
RPRD1B-209ENST00000622494 RPIAP49247 311 aa7.07□□□□□ -1.28
RPRD1B-209ENST00000622494 VPS72Q15906 364 aa7.07□□□□□ -1.28
RPRD1B-209ENST00000622494 PTCRAQ6ISU1 281 aaPredicted RBP7.07□□□□□ -1.28
RPRD1B-209ENST00000622494 LARP1Q6PKG0 1096 aaKnown RBP7.07□□□□□ -1.28
RPRD1B-209ENST00000622494 HMX1Q9NP08 348 aaPredicted RBP7.07□□□□□ -1.28
RPRD1B-209ENST00000622494 PRDM11Q9NQV5 511 aa7.07□□□□□ -1.28
RPRD1B-209ENST00000622494 USP35Q9P2H5 1018 aa7.07□□□□□ -1.28
RPRD1B-209ENST00000622494 TNS1Q9HBL0 1735 aaKnown RBP7.07□□□□□ -1.28
RPRD1B-209ENST00000622494 EIF3AQ14152 1382 aaKnown RBP7.07□□□□□ -1.28
RPRD1B-209ENST00000622494 SLIT3O75094 1523 aa7.06□□□□□ -1.28
RPRD1B-209ENST00000622494 WNK3Q9BYP7 1800 aa7.06□□□□□ -1.28
RPRD1B-209ENST00000622494 USP19O94966 1318 aa7.06□□□□□ -1.28
RPRD1B-209ENST00000622494 MYT1Q01538 1121 aa7.06□□□□□ -1.28
RPRD1B-209ENST00000622494 LIAT1Q6ZQX7 453 aa7.06□□□□□ -1.28
RPRD1B-209ENST00000622494 NME9Q86XW9 330 aa7.06□□□□□ -1.28
RPRD1B-209ENST00000622494 ABTB2Q8N961 1025 aa7.06□□□□□ -1.28
RPRD1B-209ENST00000622494 MTMR14Q8NCE2 650 aa7.06□□□□□ -1.28
RPRD1B-209ENST00000622494 CARD11Q9BXL7 1154 aa7.06□□□□□ -1.28
RPRD1B-209ENST00000622494 TRIM34Q9BYJ4 488 aa7.06□□□□□ -1.28
RPRD1B-209ENST00000622494 MAP10Q9P2G4 905 aa7.06□□□□□ -1.28
RPRD1B-209ENST00000622494 NFAT5O94916 1531 aa7.06□□□□□ -1.28
RPRD1B-209ENST00000622494 LTN1O94822 1766 aa7.05□□□□□ -1.28
RPRD1B-209ENST00000622494 RGPD2P0DJD1 1756 aa7.05□□□□□ -1.28
RPRD1B-209ENST00000622494 PTF1AQ7RTS3 328 aa7.05□□□□□ -1.28
RPRD1B-209ENST00000622494 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.05□□□□□ -1.28
RPRD1B-209ENST00000622494 SLC12A5Q9H2X9 1139 aa7.05□□□□□ -1.28
RPRD1B-209ENST00000622494 SNRKQ9NRH2 765 aa7.05□□□□□ -1.28
RPRD1B-209ENST00000622494 V9GY48 417 aaPredicted RBP7.05□□□□□ -1.28
RPRD1B-209ENST00000622494 MYOM1P52179 1685 aa7.05□□□□□ -1.28
RPRD1B-209ENST00000622494 ATAD2Q6PL18 1390 aa7.05□□□□□ -1.28
RPRD1B-209ENST00000622494 SPATA31A5Q5VU36 1347 aa7.04□□□□□ -1.28
RPRD1B-209ENST00000622494 TTC21BQ7Z4L5 1316 aa7.04□□□□□ -1.28
RPRD1B-209ENST00000622494 SPATA31A7Q8IWB4 1347 aa7.04□□□□□ -1.28
RPRD1B-209ENST00000622494 CPSF1Q10570 1443 aaKnown RBP7.04□□□□□ -1.28
RPRD1B-209ENST00000622494 ST20-MTHFSA0A0A6YYL1 179 aa7.04□□□□□ -1.28
RPRD1B-209ENST00000622494 MCM6Q14566 821 aa7.04□□□□□ -1.28
RPRD1B-209ENST00000622494 CCDC24Q8N4L8 307 aa7.04□□□□□ -1.28
RPRD1B-209ENST00000622494 TMC1Q8TDI8 760 aa7.04□□□□□ -1.28
RPRD1B-209ENST00000622494 TESK2Q96S53 571 aa7.04□□□□□ -1.28
RPRD1B-209ENST00000622494 UNC93B1Q9H1C4 597 aa7.04□□□□□ -1.28
RPRD1B-209ENST00000622494 LRRC37A3O60309 1634 aa7.04□□□□□ -1.28
RPRD1B-209ENST00000622494 COL5A2P05997 1499 aaPredicted RBP7.04□□□□□ -1.28
RPRD1B-209ENST00000622494 EVC2Q86UK5 1308 aa7.03□□□□□ -1.28
RPRD1B-209ENST00000622494 GCP02774 474 aa7.03□□□□□ -1.28
RPRD1B-209ENST00000622494 SLC19A1P41440 591 aa7.03□□□□□ -1.28
RPRD1B-209ENST00000622494 KRT27Q7Z3Y8 459 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms