RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 MPRIPQ6WCQ1 1025 aa18.87■□□□□ 0.61
NPHP4-211ENST00000622020 SIRT1Q96EB6 747 aa18.87■□□□□ 0.61
NPHP4-211ENST00000622020 CCDC8Q9H0W5 538 aaPredicted RBP18.87■□□□□ 0.61
NPHP4-211ENST00000622020 C9orf78Q9NZ63 289 aaPredicted RBP18.87■□□□□ 0.61
NPHP4-211ENST00000622020 MTMR6Q9Y217 621 aa18.87■□□□□ 0.61
NPHP4-211ENST00000622020 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.87■□□□□ 0.61
NPHP4-211ENST00000622020 PYCARDQ9ULZ3 195 aa18.87■□□□□ 0.61
NPHP4-211ENST00000622020 POLA2Q14181 598 aa18.86■□□□□ 0.61
NPHP4-211ENST00000622020 CLASRPQ8N2M8 674 aaKnown RBP18.86■□□□□ 0.61
NPHP4-211ENST00000622020 PRDM4Q9UKN5 801 aa18.86■□□□□ 0.61
NPHP4-211ENST00000622020 NRKQ7Z2Y5 1582 aa18.86■□□□□ 0.61
NPHP4-211ENST00000622020 TMEM2Q9UHN6 1383 aa18.86■□□□□ 0.61
NPHP4-211ENST00000622020 IFIT2P09913 472 aaKnown RBP18.86■□□□□ 0.61
NPHP4-211ENST00000622020 AIMP1Q12904 312 aaKnown RBP18.86■□□□□ 0.61
NPHP4-211ENST00000622020 KDRP35968 1356 aa18.85■□□□□ 0.61
NPHP4-211ENST00000622020 MAP3K5Q99683 1374 aa18.85■□□□□ 0.61
NPHP4-211ENST00000622020 PRAMEF22A3QJZ6 481 aa18.85■□□□□ 0.61
NPHP4-211ENST00000622020 BEND3Q5T5X7 828 aa18.85■□□□□ 0.61
NPHP4-211ENST00000622020 LARP1BQ659C4 914 aaKnown RBP18.85■□□□□ 0.61
NPHP4-211ENST00000622020 AACSQ86V21 672 aa18.85■□□□□ 0.61
NPHP4-211ENST00000622020 MYRIPQ8NFW9 859 aa18.85■□□□□ 0.61
NPHP4-211ENST00000622020 CYP46A1Q9Y6A2 500 aa18.85■□□□□ 0.61
NPHP4-211ENST00000622020 SETD1BQ9UPS6 1966 aaKnown RBP18.85■□□□□ 0.61
NPHP4-211ENST00000622020 MAP7D2Q96T17 732 aa18.85■□□□□ 0.61
NPHP4-211ENST00000622020 TAF6LQ9Y6J9 622 aa18.85■□□□□ 0.61
NPHP4-211ENST00000622020 CBX1P83916 185 aa18.84■□□□□ 0.61
NPHP4-211ENST00000622020 ST3GAL1Q11201 340 aa18.84■□□□□ 0.61
NPHP4-211ENST00000622020 PPP6R1Q9UPN7 881 aa18.84■□□□□ 0.61
NPHP4-211ENST00000622020 AKAP12Q02952 1782 aa18.84■□□□□ 0.61
NPHP4-211ENST00000622020 SPATA31D1Q6ZQQ2 1576 aa18.84■□□□□ 0.61
NPHP4-211ENST00000622020 UVSSAQ2YD98 709 aa18.84■□□□□ 0.61
NPHP4-211ENST00000622020 CDC37L1Q7L3B6 337 aa18.84■□□□□ 0.61
NPHP4-211ENST00000622020 LUZP1Q86V48 1076 aa18.84■□□□□ 0.61
NPHP4-211ENST00000622020 KLHDC4Q8TBB5 520 aa18.84■□□□□ 0.61
NPHP4-211ENST00000622020 TPCN1Q9ULQ1 816 aa18.84■□□□□ 0.61
NPHP4-211ENST00000622020 ATP6V1DQ9Y5K8 247 aa18.84■□□□□ 0.61
NPHP4-211ENST00000622020 TNRQ92752 1358 aa18.83■□□□□ 0.61
NPHP4-211ENST00000622020 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.83■□□□□ 0.61
NPHP4-211ENST00000622020 GLRX3O76003 335 aaKnown RBP18.83■□□□□ 0.61
NPHP4-211ENST00000622020 LIG1P18858 919 aa18.83■□□□□ 0.61
NPHP4-211ENST00000622020 PROSER3Q2NL68 480 aa18.83■□□□□ 0.61
NPHP4-211ENST00000622020 ZNF710Q8N1W2 664 aa18.83■□□□□ 0.61
NPHP4-211ENST00000622020 TMEM87AQ8NBN3 555 aa18.83■□□□□ 0.61
NPHP4-211ENST00000622020 LRRC59Q96AG4 307 aaKnown RBP18.83■□□□□ 0.61
NPHP4-211ENST00000622020 BOLA2Q9H3K6 86 aa18.83■□□□□ 0.61
NPHP4-211ENST00000622020 CCDC9Q9Y3X0 531 aaKnown RBP18.83■□□□□ 0.61
NPHP4-211ENST00000622020 PPFIA3O75145 1194 aa18.83■□□□□ 0.6
NPHP4-211ENST00000622020 KCNF1Q9H3M0 494 aa18.83■□□□□ 0.6
NPHP4-211ENST00000622020 TTC6Q86TZ1 520 aa18.82■□□□□ 0.6
NPHP4-211ENST00000622020 MAP3K2Q9Y2U5 619 aa18.82■□□□□ 0.6
NPHP4-211ENST00000622020 RBM8AQ9Y5S9 174 aaKnown RBP18.82■□□□□ 0.6
NPHP4-211ENST00000622020 AOX1Q06278 1338 aa18.82■□□□□ 0.6
NPHP4-211ENST00000622020 ADAMTS13Q76LX8 1427 aa18.82■□□□□ 0.6
NPHP4-211ENST00000622020 FOSBP53539 338 aa18.82■□□□□ 0.6
NPHP4-211ENST00000622020 EIF4A1P60842 406 aaKnown RBP18.82■□□□□ 0.6
NPHP4-211ENST00000622020 TEFQ10587 303 aa18.82■□□□□ 0.6
NPHP4-211ENST00000622020 DRC7Q8IY82 874 aa18.82■□□□□ 0.6
NPHP4-211ENST00000622020 DNAJC5Q9H3Z4 198 aa18.82■□□□□ 0.6
NPHP4-211ENST00000622020 NDUFB9Q9Y6M9 179 aa18.82■□□□□ 0.6
NPHP4-211ENST00000622020 TECPR2O15040 1411 aa18.82■□□□□ 0.6
NPHP4-211ENST00000622020 EDC3Q96F86 508 aaKnown RBP18.82■□□□□ 0.6
NPHP4-211ENST00000622020 ECHDC1Q9NTX5 307 aa18.82■□□□□ 0.6
NPHP4-211ENST00000622020 ZHX1Q9UKY1 873 aaPredicted RBP18.82■□□□□ 0.6
NPHP4-211ENST00000622020 TTC21AQ8NDW8 1320 aa18.82■□□□□ 0.6
NPHP4-211ENST00000622020 SPDYE4A6NLX3 237 aa18.81■□□□□ 0.6
NPHP4-211ENST00000622020 BTBD11A6QL63 1104 aa18.81■□□□□ 0.6
NPHP4-211ENST00000622020 HTATSF1O43719 755 aaKnown RBP18.81■□□□□ 0.6
NPHP4-211ENST00000622020 ZKSCAN1P17029 563 aaPredicted RBP18.81■□□□□ 0.6
NPHP4-211ENST00000622020 NBPF6Q5VWK0 638 aa18.81■□□□□ 0.6
NPHP4-211ENST00000622020 NBPF4Q96M43 638 aa18.81■□□□□ 0.6
NPHP4-211ENST00000622020 TLR7Q9NYK1 1049 aaKnown RBP18.81■□□□□ 0.6
NPHP4-211ENST00000622020 PTGS1P23219 599 aa18.81■□□□□ 0.6
NPHP4-211ENST00000622020 RUFY2Q8WXA3 655 aa18.81■□□□□ 0.6
NPHP4-211ENST00000622020 PODXL2Q9NZ53 605 aa18.81■□□□□ 0.6
NPHP4-211ENST00000622020 PTPRUQ92729 1446 aa18.8■□□□□ 0.6
NPHP4-211ENST00000622020 LETM1O95202 739 aaPredicted RBP18.8■□□□□ 0.6
NPHP4-211ENST00000622020 CEBPZQ03701 1054 aaKnown RBP18.8■□□□□ 0.6
NPHP4-211ENST00000622020 NMIQ13287 307 aaPredicted RBP18.8■□□□□ 0.6
NPHP4-211ENST00000622020 DDX11Q96FC9 970 aa18.8■□□□□ 0.6
NPHP4-211ENST00000622020 GOLGA6L4A6NEF3 574 aa18.8■□□□□ 0.6
NPHP4-211ENST00000622020 FUCA2Q9BTY2 467 aa18.8■□□□□ 0.6
NPHP4-211ENST00000622020 CHGBP05060 677 aa18.79■□□□□ 0.6
NPHP4-211ENST00000622020 CREB3L3Q68CJ9 461 aa18.79■□□□□ 0.6
NPHP4-211ENST00000622020 KIF3AQ9Y496 699 aa18.79■□□□□ 0.6
NPHP4-211ENST00000622020 LRMPQ12912 555 aa18.79■□□□□ 0.6
NPHP4-211ENST00000622020 VPS53Q5VIR6 699 aa18.79■□□□□ 0.6
NPHP4-211ENST00000622020 DACT1Q9NYF0 836 aa18.79■□□□□ 0.6
NPHP4-211ENST00000622020 NRBP1Q9UHY1 535 aa18.79■□□□□ 0.6
NPHP4-211ENST00000622020 CCDC192P0DO97 292 aa18.79■□□□□ 0.6
NPHP4-211ENST00000622020 PPP4R3BQ5MIZ7 849 aa18.79■□□□□ 0.6
NPHP4-211ENST00000622020 ZSWIM6Q9HCJ5 1215 aa18.79■□□□□ 0.6
NPHP4-211ENST00000622020 EID1Q9Y6B2 187 aa18.79■□□□□ 0.6
NPHP4-211ENST00000622020 RGPD1P0DJD0 1748 aa18.78■□□□□ 0.6
NPHP4-211ENST00000622020 LMOD2Q6P5Q4 547 aa18.78■□□□□ 0.6
NPHP4-211ENST00000622020 EAF2Q96CJ1 260 aaPredicted RBP18.78■□□□□ 0.6
NPHP4-211ENST00000622020 IL17RAQ96F46 866 aa18.78■□□□□ 0.6
NPHP4-211ENST00000622020 A0A0D9SFI3 127 aa18.77■□□□□ 0.6
NPHP4-211ENST00000622020 FSD1Q9BTV5 496 aa18.77■□□□□ 0.6
NPHP4-211ENST00000622020 BCL2L12Q9HB09 334 aa18.77■□□□□ 0.6
NPHP4-211ENST00000622020 CCDC171Q6TFL3 1326 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms