RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 CHL1O00533 1208 aa23.52■■□□□ 1.36
SCAMP4-213ENST00000621748 RGL2O15211 777 aa23.52■■□□□ 1.36
SCAMP4-213ENST00000621748 PDE6BP35913 854 aa23.51■■□□□ 1.35
SCAMP4-213ENST00000621748 TTLL7Q6ZT98 887 aa23.51■■□□□ 1.35
SCAMP4-213ENST00000621748 TTLL6Q8N841 843 aa23.51■■□□□ 1.35
SCAMP4-213ENST00000621748 ZNF526Q8TF50 670 aaPredicted RBP23.51■■□□□ 1.35
SCAMP4-213ENST00000621748 NIP7Q9Y221 180 aaKnown RBP eCLIP23.51■■□□□ 1.35
SCAMP4-213ENST00000621748 NPHP1O15259 732 aa23.5■■□□□ 1.35
SCAMP4-213ENST00000621748 EIF2S2P20042 333 aaKnown RBP23.5■■□□□ 1.35
SCAMP4-213ENST00000621748 NBPF5PQ86XG9 351 aaPredicted RBP23.5■■□□□ 1.35
SCAMP4-213ENST00000621748 LAS1LQ9Y4W2 734 aaKnown RBP23.5■■□□□ 1.35
SCAMP4-213ENST00000621748 NUP98P52948 1817 aa23.49■■□□□ 1.35
SCAMP4-213ENST00000621748 APAF1O14727 1248 aa23.49■■□□□ 1.35
SCAMP4-213ENST00000621748 ST5P78524 1137 aa23.49■■□□□ 1.35
SCAMP4-213ENST00000621748 PDIA6Q15084 440 aa23.49■■□□□ 1.35
SCAMP4-213ENST00000621748 KRT24Q2M2I5 525 aa23.49■■□□□ 1.35
SCAMP4-213ENST00000621748 ZNF622Q969S3 477 aaKnown RBP eCLIP23.49■■□□□ 1.35
SCAMP4-213ENST00000621748 GPBP1L1Q9HC44 474 aaPredicted RBP23.49■■□□□ 1.35
SCAMP4-213ENST00000621748 COL11A2P13942 1736 aaPredicted RBP23.49■■□□□ 1.35
SCAMP4-213ENST00000621748 ERBB4Q15303 1308 aa23.49■■□□□ 1.35
SCAMP4-213ENST00000621748 MAP3K15Q6ZN16 1313 aa23.49■■□□□ 1.35
SCAMP4-213ENST00000621748 SBF1O95248 1867 aa23.48■■□□□ 1.35
SCAMP4-213ENST00000621748 ERVV-1B6SEH8 477 aa23.48■■□□□ 1.35
SCAMP4-213ENST00000621748 C1QTNF8P60827 252 aa23.48■■□□□ 1.35
SCAMP4-213ENST00000621748 C9orf131Q5VYM1 1079 aa23.48■■□□□ 1.35
SCAMP4-213ENST00000621748 LRP10Q7Z4F1 713 aa23.48■■□□□ 1.35
SCAMP4-213ENST00000621748 PDZRN3Q9UPQ7 1066 aa23.48■■□□□ 1.35
SCAMP4-213ENST00000621748 FAM177BA6PVY3 158 aa23.47■■□□□ 1.35
SCAMP4-213ENST00000621748 PROSER3Q2NL68 480 aa23.46■■□□□ 1.35
SCAMP4-213ENST00000621748 TPTE2Q6XPS3 522 aa23.46■■□□□ 1.35
SCAMP4-213ENST00000621748 KIF6Q6ZMV9 814 aa23.46■■□□□ 1.35
SCAMP4-213ENST00000621748 ZBTB3Q9H5J0 574 aa23.46■■□□□ 1.35
SCAMP4-213ENST00000621748 ANXA1P04083 346 aa23.45■■□□□ 1.34
SCAMP4-213ENST00000621748 SRGNP10124 158 aa23.45■■□□□ 1.34
SCAMP4-213ENST00000621748 NECTIN2Q92692 538 aa23.45■■□□□ 1.34
SCAMP4-213ENST00000621748 CFAP44Q96MT7 982 aa23.44■■□□□ 1.34
SCAMP4-213ENST00000621748 RASSF7Q02833 373 aa23.43■■□□□ 1.34
SCAMP4-213ENST00000621748 STYK1Q6J9G0 422 aa23.42■■□□□ 1.34
SCAMP4-213ENST00000621748 RNF181Q9P0P0 153 aa23.42■■□□□ 1.34
SCAMP4-213ENST00000621748 ZNF219Q9P2Y4 722 aaPredicted RBP23.42■■□□□ 1.34
SCAMP4-213ENST00000621748 SLX4Q8IY92 1834 aa23.42■■□□□ 1.34
SCAMP4-213ENST00000621748 CACNA1SQ13698 1873 aa23.41■■□□□ 1.34
SCAMP4-213ENST00000621748 KLRG2A4D1S0 409 aaPredicted RBP23.41■■□□□ 1.34
SCAMP4-213ENST00000621748 C21orf2O43822 256 aa23.41■■□□□ 1.34
SCAMP4-213ENST00000621748 ZNF853P0CG23 659 aa23.41■■□□□ 1.34
SCAMP4-213ENST00000621748 GPTP24298 496 aa23.41■■□□□ 1.34
SCAMP4-213ENST00000621748 PRELPP51888 382 aa23.41■■□□□ 1.34
SCAMP4-213ENST00000621748 GIGYF2Q6Y7W6 1299 aaKnown RBP23.41■■□□□ 1.34
SCAMP4-213ENST00000621748 MASTLQ96GX5 879 aa23.41■■□□□ 1.34
SCAMP4-213ENST00000621748 MBIPQ9NS73 344 aa23.41■■□□□ 1.34
SCAMP4-213ENST00000621748 UBN2Q6ZU65 1347 aa23.4■■□□□ 1.34
SCAMP4-213ENST00000621748 NFKBIEO00221 500 aa23.4■■□□□ 1.34
SCAMP4-213ENST00000621748 ANP32CO43423 234 aa23.4■■□□□ 1.34
SCAMP4-213ENST00000621748 ZNF34Q8IZ26 560 aa23.4■■□□□ 1.34
SCAMP4-213ENST00000621748 CNKSR1Q969H4 720 aa23.4■■□□□ 1.34
SCAMP4-213ENST00000621748 CCDC88AQ3V6T2 1871 aa23.4■■□□□ 1.34
SCAMP4-213ENST00000621748 GTF2E1P29083 439 aaPredicted RBP23.39■■□□□ 1.33
SCAMP4-213ENST00000621748 NUTM1Q86Y26 1132 aa23.39■■□□□ 1.33
SCAMP4-213ENST00000621748 DDX21Q9NR30 783 aaKnown RBP eCLIP23.39■■□□□ 1.33
SCAMP4-213ENST00000621748 KIF3CO14782 793 aa23.38■■□□□ 1.33
SCAMP4-213ENST00000621748 SUSD4Q5VX71 490 aa23.38■■□□□ 1.33
SCAMP4-213ENST00000621748 PRPF40BQ6NWY9 871 aaKnown RBP23.38■■□□□ 1.33
SCAMP4-213ENST00000621748 COPS6Q7L5N1 327 aa23.38■■□□□ 1.33
SCAMP4-213ENST00000621748 NYXQ9GZU5 481 aa23.38■■□□□ 1.33
SCAMP4-213ENST00000621748 SENP3-EIF4A1A0A087X0R7 540 aa23.37■■□□□ 1.33
SCAMP4-213ENST00000621748 NPR1P16066 1061 aa23.37■■□□□ 1.33
SCAMP4-213ENST00000621748 LMNB1P20700 586 aa23.37■■□□□ 1.33
SCAMP4-213ENST00000621748 AIMP1Q12904 312 aaKnown RBP23.37■■□□□ 1.33
SCAMP4-213ENST00000621748 ERFEQ4G0M1 354 aa23.37■■□□□ 1.33
SCAMP4-213ENST00000621748 XAGE3Q8WTP9 111 aa23.37■■□□□ 1.33
SCAMP4-213ENST00000621748 MRS2Q9HD23 443 aa23.37■■□□□ 1.33
SCAMP4-213ENST00000621748 IFT57Q9NWB7 429 aa23.37■■□□□ 1.33
SCAMP4-213ENST00000621748 CHPF2Q9P2E5 772 aa23.37■■□□□ 1.33
SCAMP4-213ENST00000621748 ABCC12Q96J65 1359 aa23.37■■□□□ 1.33
SCAMP4-213ENST00000621748 FER1L6Q2WGJ9 1857 aa23.36■■□□□ 1.33
SCAMP4-213ENST00000621748 HOXB7P09629 217 aa23.36■■□□□ 1.33
SCAMP4-213ENST00000621748 HDGFL1Q5TGJ6 251 aa23.36■■□□□ 1.33
SCAMP4-213ENST00000621748 DUSP27Q5VZP5 1158 aa23.36■■□□□ 1.33
SCAMP4-213ENST00000621748 ARFGEF2Q9Y6D5 1785 aa23.36■■□□□ 1.33
SCAMP4-213ENST00000621748 TNRC6CQ9HCJ0 1690 aaKnown RBP23.35■■□□□ 1.33
SCAMP4-213ENST00000621748 GNAI1P63096 354 aa23.35■■□□□ 1.33
SCAMP4-213ENST00000621748 CALD1Q05682 793 aaKnown RBP23.35■■□□□ 1.33
SCAMP4-213ENST00000621748 C7orf43Q8WVR3 580 aa23.34■■□□□ 1.33
SCAMP4-213ENST00000621748 NMRK2Q9NPI5 230 aa23.34■■□□□ 1.33
SCAMP4-213ENST00000621748 IBTKQ9P2D0 1353 aaPredicted RBP23.33■■□□□ 1.33
SCAMP4-213ENST00000621748 NTSR2O95665 410 aa23.33■■□□□ 1.33
SCAMP4-213ENST00000621748 CRY2Q49AN0 593 aa23.32■■□□□ 1.32
SCAMP4-213ENST00000621748 PARP10Q53GL7 1025 aa23.32■■□□□ 1.32
SCAMP4-213ENST00000621748 DBF4Q9UBU7 674 aaPredicted RBP23.32■■□□□ 1.32
SCAMP4-213ENST00000621748 ELL2O00472 640 aaPredicted RBP23.31■■□□□ 1.32
SCAMP4-213ENST00000621748 PPP1R42Q7Z4L9 355 aa23.31■■□□□ 1.32
SCAMP4-213ENST00000621748 ANKRD36CQ5JPF3 1778 aa23.3■■□□□ 1.32
SCAMP4-213ENST00000621748 C8orf58Q8NAV2 365 aa23.3■■□□□ 1.32
SCAMP4-213ENST00000621748 ALDH1B1P30837 517 aa23.29■■□□□ 1.32
SCAMP4-213ENST00000621748 TCIRG1Q13488 830 aa23.29■■□□□ 1.32
SCAMP4-213ENST00000621748 CCDC27Q2M243 656 aa23.29■■□□□ 1.32
SCAMP4-213ENST00000621748 RIC1Q4ADV7 1423 aa23.29■■□□□ 1.32
SCAMP4-213ENST00000621748 HSP90AB3PQ58FF7 597 aa23.29■■□□□ 1.32
SCAMP4-213ENST00000621748 SOGA3Q5TF21 947 aa23.29■■□□□ 1.32
SCAMP4-213ENST00000621748 OLFM4Q6UX06 510 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms