RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 F6X3S4 739 aa11.42□□□□□ -0.58
CLTCL1-211ENST00000621271 PRPF40AO75400 957 aaKnown RBP11.42□□□□□ -0.58
CLTCL1-211ENST00000621271 SSR1P43307 286 aaKnown RBP11.42□□□□□ -0.58
CLTCL1-211ENST00000621271 CCDC150Q8NCX0 1101 aa11.42□□□□□ -0.58
CLTCL1-211ENST00000621271 CCDC12Q8WUD4 166 aaPredicted RBP11.42□□□□□ -0.58
CLTCL1-211ENST00000621271 KDM5BQ9UGL1 1544 aa11.42□□□□□ -0.58
CLTCL1-211ENST00000621271 TSPY2A6NKD2 308 aa11.42□□□□□ -0.58
CLTCL1-211ENST00000621271 BAG4O95429 457 aaKnown RBP11.42□□□□□ -0.58
CLTCL1-211ENST00000621271 FLIIQ13045 1269 aa11.42□□□□□ -0.58
CLTCL1-211ENST00000621271 CABLES1Q8TDN4 633 aa11.42□□□□□ -0.58
CLTCL1-211ENST00000621271 ZC3H12CQ9C0D7 883 aaKnown RBP11.42□□□□□ -0.58
CLTCL1-211ENST00000621271 UBA5Q9GZZ9 404 aa11.41□□□□□ -0.58
CLTCL1-211ENST00000621271 TNMDQ9H2S6 317 aa11.41□□□□□ -0.58
CLTCL1-211ENST00000621271 CIZ1Q9ULV3 898 aaPredicted RBP11.41□□□□□ -0.58
CLTCL1-211ENST00000621271 IFIT3O14879 490 aaKnown RBP11.41□□□□□ -0.58
CLTCL1-211ENST00000621271 ALDH1L2Q3SY69 923 aa11.41□□□□□ -0.58
CLTCL1-211ENST00000621271 ANKRD13DQ6ZTN6 518 aa11.41□□□□□ -0.58
CLTCL1-211ENST00000621271 CRNKL1Q9BZJ0 848 aaKnown RBP11.41□□□□□ -0.58
CLTCL1-211ENST00000621271 NCOA1Q15788 1441 aa11.41□□□□□ -0.58
CLTCL1-211ENST00000621271 F8W031 263 aaPredicted RBP11.41□□□□□ -0.58
CLTCL1-211ENST00000621271 PDIA4P13667 645 aaKnown RBP11.41□□□□□ -0.58
CLTCL1-211ENST00000621271 KIF5BP33176 963 aa11.41□□□□□ -0.58
CLTCL1-211ENST00000621271 CA8P35219 290 aa11.41□□□□□ -0.58
CLTCL1-211ENST00000621271 SPATA32Q96LK8 384 aa11.41□□□□□ -0.58
CLTCL1-211ENST00000621271 BEGAINQ9BUH8 593 aa11.41□□□□□ -0.58
CLTCL1-211ENST00000621271 UQCRFS1P1P0C7P4 283 aa11.41□□□□□ -0.58
CLTCL1-211ENST00000621271 LIG1P18858 919 aa11.41□□□□□ -0.58
CLTCL1-211ENST00000621271 CASTP20810 708 aaKnown RBP11.41□□□□□ -0.58
CLTCL1-211ENST00000621271 RBM26Q5T8P6 1007 aaKnown RBP11.41□□□□□ -0.58
CLTCL1-211ENST00000621271 ERCC4Q92889 916 aaPredicted RBP11.41□□□□□ -0.58
CLTCL1-211ENST00000621271 DDX11Q96FC9 970 aa11.41□□□□□ -0.58
CLTCL1-211ENST00000621271 LRRFIP2Q9Y608 721 aaKnown RBP11.41□□□□□ -0.58
CLTCL1-211ENST00000621271 DHX8Q14562 1220 aaKnown RBP11.4□□□□□ -0.58
CLTCL1-211ENST00000621271 CCDC82Q8N4S0 544 aa11.4□□□□□ -0.58
CLTCL1-211ENST00000621271 PHAXQ9H814 394 aaKnown RBP11.4□□□□□ -0.58
CLTCL1-211ENST00000621271 HMGB1P09429 215 aaKnown RBP11.4□□□□□ -0.58
CLTCL1-211ENST00000621271 TRAF1Q13077 416 aa11.4□□□□□ -0.58
CLTCL1-211ENST00000621271 PPP4R3BQ5MIZ7 849 aa11.4□□□□□ -0.58
CLTCL1-211ENST00000621271 TSPY26PQ9H489 355 aa11.4□□□□□ -0.58
CLTCL1-211ENST00000621271 VEZTQ9HBM0 779 aa11.4□□□□□ -0.58
CLTCL1-211ENST00000621271 CETN2P41208 172 aa11.4□□□□□ -0.58
CLTCL1-211ENST00000621271 KAT14Q9H8E8 782 aa11.4□□□□□ -0.58
CLTCL1-211ENST00000621271 NLRP5P59047 1200 aa11.4□□□□□ -0.58
CLTCL1-211ENST00000621271 RBM10P98175 930 aaKnown RBP11.4□□□□□ -0.58
CLTCL1-211ENST00000621271 ZRSR2Q15696 482 aaKnown RBP11.4□□□□□ -0.58
CLTCL1-211ENST00000621271 ZNF804AQ7Z570 1209 aa11.4□□□□□ -0.58
CLTCL1-211ENST00000621271 EYA3Q99504 573 aa11.4□□□□□ -0.58
CLTCL1-211ENST00000621271 SAMM50Q9Y512 469 aa11.4□□□□□ -0.58
CLTCL1-211ENST00000621271 BIN2Q9UBW5 565 aaPredicted RBP11.39□□□□□ -0.59
CLTCL1-211ENST00000621271 ABCC5O15440 1437 aa11.39□□□□□ -0.59
CLTCL1-211ENST00000621271 CCDC192P0DO97 292 aa11.39□□□□□ -0.59
CLTCL1-211ENST00000621271 KIF20AO95235 890 aa11.39□□□□□ -0.59
CLTCL1-211ENST00000621271 EIF5P55010 431 aaKnown RBP11.39□□□□□ -0.59
CLTCL1-211ENST00000621271 SEPT7Q16181 437 aaKnown RBP11.39□□□□□ -0.59
CLTCL1-211ENST00000621271 PRPF40BQ6NWY9 871 aaKnown RBP11.39□□□□□ -0.59
CLTCL1-211ENST00000621271 TRMT1LQ7Z2T5 733 aaKnown RBP11.39□□□□□ -0.59
CLTCL1-211ENST00000621271 SIRT1Q96EB6 747 aa11.39□□□□□ -0.59
CLTCL1-211ENST00000621271 UTP14AQ9BVJ6 771 aaKnown RBP11.39□□□□□ -0.59
CLTCL1-211ENST00000621271 VAT1LQ9HCJ6 419 aa11.39□□□□□ -0.59
CLTCL1-211ENST00000621271 K7ELQ4 463 aaPredicted RBP11.39□□□□□ -0.59
CLTCL1-211ENST00000621271 TSG101Q99816 390 aa11.39□□□□□ -0.59
CLTCL1-211ENST00000621271 SNRKQ9NRH2 765 aa11.39□□□□□ -0.59
CLTCL1-211ENST00000621271 B4DLN1 442 aa11.39□□□□□ -0.59
CLTCL1-211ENST00000621271 CBFA2T2O43439 604 aa11.39□□□□□ -0.59
CLTCL1-211ENST00000621271 MRPL12P52815 198 aaKnown RBP11.39□□□□□ -0.59
CLTCL1-211ENST00000621271 NSD2O96028 1365 aa11.38□□□□□ -0.59
CLTCL1-211ENST00000621271 CDCA7Q9BWT1 371 aaPredicted RBP11.38□□□□□ -0.59
CLTCL1-211ENST00000621271 PI4KAP2A4QPH2 592 aa11.38□□□□□ -0.59
CLTCL1-211ENST00000621271 GOLGA8AA7E2F4 631 aa11.38□□□□□ -0.59
CLTCL1-211ENST00000621271 GOLGA8BA8MQT2 603 aa11.38□□□□□ -0.59
CLTCL1-211ENST00000621271 GOLIM4O00461 696 aa11.38□□□□□ -0.59
CLTCL1-211ENST00000621271 SKIDA1Q1XH10 827 aa11.38□□□□□ -0.59
CLTCL1-211ENST00000621271 PI4KAP1Q8N8J0 262 aa11.38□□□□□ -0.59
CLTCL1-211ENST00000621271 PTPRCP08575 1304 aa11.38□□□□□ -0.59
CLTCL1-211ENST00000621271 TRAPPC3LQ5T215 181 aa11.38□□□□□ -0.59
CLTCL1-211ENST00000621271 ANKRD62A6NC57 917 aa11.38□□□□□ -0.59
CLTCL1-211ENST00000621271 DZIP3Q86Y13 1208 aaKnown RBP11.38□□□□□ -0.59
CLTCL1-211ENST00000621271 BTG4Q9NY30 223 aa11.38□□□□□ -0.59
CLTCL1-211ENST00000621271 PIK3R4Q99570 1358 aa11.37□□□□□ -0.59
CLTCL1-211ENST00000621271 SLC4A8Q2Y0W8 1093 aa11.37□□□□□ -0.59
CLTCL1-211ENST00000621271 NSFL1CQ9UNZ2 370 aaKnown RBP11.37□□□□□ -0.59
CLTCL1-211ENST00000621271 SSRP1Q08945 709 aaKnown RBP11.37□□□□□ -0.59
CLTCL1-211ENST00000621271 SSH1Q8WYL5 1049 aa11.37□□□□□ -0.59
CLTCL1-211ENST00000621271 STX8Q9UNK0 236 aa11.37□□□□□ -0.59
CLTCL1-211ENST00000621271 RIMS2Q9UQ26 1411 aa11.37□□□□□ -0.59
CLTCL1-211ENST00000621271 BAG6P46379 1132 aa11.37□□□□□ -0.59
CLTCL1-211ENST00000621271 MFSD6Q6ZSS7 791 aa11.37□□□□□ -0.59
CLTCL1-211ENST00000621271 MAP3K9P80192 1104 aa11.36□□□□□ -0.59
CLTCL1-211ENST00000621271 SLFN5Q08AF3 891 aa11.36□□□□□ -0.59
CLTCL1-211ENST00000621271 GNPATO15228 680 aa11.36□□□□□ -0.59
CLTCL1-211ENST00000621271 C8orf76Q96K31 380 aa11.36□□□□□ -0.59
CLTCL1-211ENST00000621271 SMARCA5O60264 1052 aaPredicted RBP11.36□□□□□ -0.59
CLTCL1-211ENST00000621271 CKAP2LQ8IYA6 745 aa11.36□□□□□ -0.59
CLTCL1-211ENST00000621271 PCF11O94913 1555 aaKnown RBP11.36□□□□□ -0.59
CLTCL1-211ENST00000621271 PICALMQ13492 652 aa11.36□□□□□ -0.59
CLTCL1-211ENST00000621271 SLC39A6Q13433 755 aa11.35□□□□□ -0.59
CLTCL1-211ENST00000621271 AKAP4Q5JQC9 854 aa11.35□□□□□ -0.59
CLTCL1-211ENST00000621271 ZSCAN30Q86W11 494 aa11.35□□□□□ -0.59
CLTCL1-211ENST00000621271 XAGE3Q8WTP9 111 aa11.35□□□□□ -0.59
CLTCL1-211ENST00000621271 ECHDC1Q9NTX5 307 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms