RNA–Protein interactions for RNA: ENST00000618548.4

PCSK6-217, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCSK6, Length 4,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-217ENST00000618548 CAVIN2O95810 425 aa24.02■■□□□ 1.44
PCSK6-217ENST00000618548 JARID2Q92833 1246 aaPredicted RBP24.02■■□□□ 1.44
PCSK6-217ENST00000618548 SYNMO15061 1565 aa24.02■■□□□ 1.44
PCSK6-217ENST00000618548 ABCC10Q5T3U5 1492 aa24.02■■□□□ 1.44
PCSK6-217ENST00000618548 FOXO3O43524 673 aa24.02■■□□□ 1.44
PCSK6-217ENST00000618548 ZNF397Q8NF99 534 aaPredicted RBP24.02■■□□□ 1.44
PCSK6-217ENST00000618548 PDLIM2Q96JY6 352 aa24.01■■□□□ 1.43
PCSK6-217ENST00000618548 ZNF530Q6P9A1 599 aaPredicted RBP24.01■■□□□ 1.43
PCSK6-217ENST00000618548 ANKRD20A12PQ8NF67 263 aa24.01■■□□□ 1.43
PCSK6-217ENST00000618548 CCDC69A6NI79 296 aa24.01■■□□□ 1.43
PCSK6-217ENST00000618548 CBFA2T2O43439 604 aa24.01■■□□□ 1.43
PCSK6-217ENST00000618548 MAST1Q9Y2H9 1570 aa24.01■■□□□ 1.43
PCSK6-217ENST00000618548 DMTNQ08495 405 aa24.01■■□□□ 1.43
PCSK6-217ENST00000618548 EIF4A2Q14240 407 aaKnown RBP24.01■■□□□ 1.43
PCSK6-217ENST00000618548 CCDC70Q6NSX1 233 aa24.01■■□□□ 1.43
PCSK6-217ENST00000618548 LRRC2Q9BYS8 371 aa24.01■■□□□ 1.43
PCSK6-217ENST00000618548 PYCARDQ9ULZ3 195 aa24.01■■□□□ 1.43
PCSK6-217ENST00000618548 SNX14Q9Y5W7 946 aa24■■□□□ 1.43
PCSK6-217ENST00000618548 PNMA6EA0A0J9YXQ4 647 aa24■■□□□ 1.43
PCSK6-217ENST00000618548 LRMPQ12912 555 aa24■■□□□ 1.43
PCSK6-217ENST00000618548 ZNF518AQ6AHZ1 1483 aa24■■□□□ 1.43
PCSK6-217ENST00000618548 MYL6BP14649 208 aa24■■□□□ 1.43
PCSK6-217ENST00000618548 SETQ01105 290 aaPredicted RBP24■■□□□ 1.43
PCSK6-217ENST00000618548 JMYQ8N9B5 988 aa24■■□□□ 1.43
PCSK6-217ENST00000618548 FANCAO15360 1455 aa23.99■■□□□ 1.43
PCSK6-217ENST00000618548 PHF23Q9BUL5 403 aaPredicted RBP23.99■■□□□ 1.43
PCSK6-217ENST00000618548 KDM5AP29375 1690 aaKnown RBP23.99■■□□□ 1.43
PCSK6-217ENST00000618548 USHBP1Q8N6Y0 703 aa23.99■■□□□ 1.43
PCSK6-217ENST00000618548 PCMTD1Q96MG8 357 aaPredicted RBP23.99■■□□□ 1.43
PCSK6-217ENST00000618548 DNAI1Q9UI46 699 aa23.99■■□□□ 1.43
PCSK6-217ENST00000618548 BTBD11A6QL63 1104 aa23.98■■□□□ 1.43
PCSK6-217ENST00000618548 AOPEPQ8N6M6 819 aa23.98■■□□□ 1.43
PCSK6-217ENST00000618548 CBX8Q9HC52 389 aa23.98■■□□□ 1.43
PCSK6-217ENST00000618548 PSME1Q06323 249 aa23.98■■□□□ 1.43
PCSK6-217ENST00000618548 BRF1Q92994 677 aa23.98■■□□□ 1.43
PCSK6-217ENST00000618548 CCDC102AQ96A19 550 aa23.98■■□□□ 1.43
PCSK6-217ENST00000618548 IL13P35225 146 aa23.97■■□□□ 1.43
PCSK6-217ENST00000618548 ZFP91Q96JP5 570 aaPredicted RBP23.97■■□□□ 1.43
PCSK6-217ENST00000618548 TOP1P11387 765 aaKnown RBP23.96■■□□□ 1.43
PCSK6-217ENST00000618548 POLR1AO95602 1720 aaPredicted RBP23.96■■□□□ 1.43
PCSK6-217ENST00000618548 GTF3C6Q969F1 213 aa23.96■■□□□ 1.43
PCSK6-217ENST00000618548 ZSWIM4Q9H7M6 989 aa23.96■■□□□ 1.43
PCSK6-217ENST00000618548 SLC3A2P08195 630 aaKnown RBP23.96■■□□□ 1.43
PCSK6-217ENST00000618548 PLEKHO1Q53GL0 409 aaPredicted RBP23.96■■□□□ 1.43
PCSK6-217ENST00000618548 VPS53Q5VIR6 699 aa23.96■■□□□ 1.43
PCSK6-217ENST00000618548 NEK1Q96PY6 1258 aa23.96■■□□□ 1.43
PCSK6-217ENST00000618548 ZSCAN12O43309 604 aa23.95■■□□□ 1.42
PCSK6-217ENST00000618548 PPFIBP1Q86W92 1011 aa23.95■■□□□ 1.42
PCSK6-217ENST00000618548 ERLIN1O75477 346 aa23.95■■□□□ 1.42
PCSK6-217ENST00000618548 ERCC4Q92889 916 aaPredicted RBP23.95■■□□□ 1.42
PCSK6-217ENST00000618548 ZBTB9Q96C00 473 aa23.95■■□□□ 1.42
PCSK6-217ENST00000618548 SLC26A8Q96RN1 970 aa23.95■■□□□ 1.42
PCSK6-217ENST00000618548 TRPM1Q7Z4N2 1603 aa23.95■■□□□ 1.42
PCSK6-217ENST00000618548 SOS1Q07889 1333 aaPredicted RBP23.94■■□□□ 1.42
PCSK6-217ENST00000618548 SGSM2O43147 1006 aa23.94■■□□□ 1.42
PCSK6-217ENST00000618548 POLR3DP05423 398 aaPredicted RBP23.94■■□□□ 1.42
PCSK6-217ENST00000618548 EIF3JO75822 258 aaKnown RBP23.94■■□□□ 1.42
PCSK6-217ENST00000618548 HSPA4P34932 840 aa23.94■■□□□ 1.42
PCSK6-217ENST00000618548 USP16Q9Y5T5 823 aa23.94■■□□□ 1.42
PCSK6-217ENST00000618548 SYT10Q6XYQ8 523 aa23.94■■□□□ 1.42
PCSK6-217ENST00000618548 ZNF75DP51815 510 aa23.93■■□□□ 1.42
PCSK6-217ENST00000618548 ARHGAP29Q52LW3 1261 aa23.93■■□□□ 1.42
PCSK6-217ENST00000618548 AXDND1Q5T1B0 1012 aaPredicted RBP23.93■■□□□ 1.42
PCSK6-217ENST00000618548 PA2G4Q9UQ80 394 aaKnown RBP23.93■■□□□ 1.42
PCSK6-217ENST00000618548 ZDHHC9Q9Y397 364 aa23.93■■□□□ 1.42
PCSK6-217ENST00000618548 RTL1A6NKG5 1358 aa23.93■■□□□ 1.42
PCSK6-217ENST00000618548 NCKAP5LQ9HCH0 1330 aa23.93■■□□□ 1.42
PCSK6-217ENST00000618548 MTHFSDQ2M296 383 aaKnown RBP23.93■■□□□ 1.42
PCSK6-217ENST00000618548 ZSCAN16Q9H4T2 348 aaPredicted RBP23.93■■□□□ 1.42
PCSK6-217ENST00000618548 RIMS2Q9UQ26 1411 aa23.93■■□□□ 1.42
PCSK6-217ENST00000618548 CHL1O00533 1208 aa23.93■■□□□ 1.42
PCSK6-217ENST00000618548 ELF2Q15723 593 aa23.93■■□□□ 1.42
PCSK6-217ENST00000618548 FILIP1LQ4L180 1135 aa23.93■■□□□ 1.42
PCSK6-217ENST00000618548 CREB3L3Q68CJ9 461 aa23.93■■□□□ 1.42
PCSK6-217ENST00000618548 CLEC17AQ6ZS10 378 aa23.93■■□□□ 1.42
PCSK6-217ENST00000618548 CASQ1P31415 396 aa23.92■■□□□ 1.42
PCSK6-217ENST00000618548 FKBP4Q02790 459 aaKnown RBP eCLIP23.92■■□□□ 1.42
PCSK6-217ENST00000618548 CAGE1Q8TC20 777 aa23.92■■□□□ 1.42
PCSK6-217ENST00000618548 C8orf76Q96K31 380 aa23.92■■□□□ 1.42
PCSK6-217ENST00000618548 LMAN1P49257 510 aa23.92■■□□□ 1.42
PCSK6-217ENST00000618548 LARP1Q6PKG0 1096 aaKnown RBP23.92■■□□□ 1.42
PCSK6-217ENST00000618548 RUFY3Q7L099 469 aa23.92■■□□□ 1.42
PCSK6-217ENST00000618548 SBNO2Q9Y2G9 1366 aa23.92■■□□□ 1.42
PCSK6-217ENST00000618548 GNG11P61952 73 aa23.91■■□□□ 1.42
PCSK6-217ENST00000618548 RUFY1Q96T51 708 aa23.91■■□□□ 1.42
PCSK6-217ENST00000618548 TSPYL1Q9H0U9 437 aa23.91■■□□□ 1.42
PCSK6-217ENST00000618548 RAD50Q92878 1312 aa23.91■■□□□ 1.42
PCSK6-217ENST00000618548 GABPB1Q06547 395 aaPredicted RBP23.91■■□□□ 1.42
PCSK6-217ENST00000618548 PIK3R4Q99570 1358 aa23.91■■□□□ 1.42
PCSK6-217ENST00000618548 LIG1P18858 919 aa23.9■■□□□ 1.42
PCSK6-217ENST00000618548 H0YHG0 523 aa23.9■■□□□ 1.42
PCSK6-217ENST00000618548 KIAA1524Q8TCG1 905 aa23.9■■□□□ 1.42
PCSK6-217ENST00000618548 NMIQ13287 307 aaPredicted RBP23.9■■□□□ 1.42
PCSK6-217ENST00000618548 CUL4AQ13619 759 aa23.9■■□□□ 1.42
PCSK6-217ENST00000618548 PBRM1Q86U86 1689 aa23.9■■□□□ 1.42
PCSK6-217ENST00000618548 VGLL3A8MV65 326 aa23.9■■□□□ 1.42
PCSK6-217ENST00000618548 RAPGEF4Q8WZA2 1011 aa23.9■■□□□ 1.42
PCSK6-217ENST00000618548 SYTL4Q96C24 671 aaPredicted RBP23.9■■□□□ 1.42
PCSK6-217ENST00000618548 LMOD1P29536 600 aaPredicted RBP23.89■■□□□ 1.42
PCSK6-217ENST00000618548 UTP14CQ5TAP6 766 aaKnown RBP23.89■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms