RNA–Protein interactions for RNA: ENST00000613943.4

SMARCD2-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5 BASIC

Gene SMARCD2, Length 2,342 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-212ENST00000613943 CNTROBQ8N137 903 aa24.05■■□□□ 1.44
SMARCD2-212ENST00000613943 SPATA31A3Q5VYP0 1347 aa24.04■■□□□ 1.44
SMARCD2-212ENST00000613943 AACSQ86V21 672 aa24.04■■□□□ 1.44
SMARCD2-212ENST00000613943 SGSM2O43147 1006 aa24.04■■□□□ 1.44
SMARCD2-212ENST00000613943 EPHA10Q5JZY3 1008 aa24.04■■□□□ 1.44
SMARCD2-212ENST00000613943 GAS2L3Q86XJ1 694 aa24.04■■□□□ 1.44
SMARCD2-212ENST00000613943 TTC5Q8N0Z6 440 aa24.04■■□□□ 1.44
SMARCD2-212ENST00000613943 ADAMTS7Q9UKP4 1686 aa24.03■■□□□ 1.44
SMARCD2-212ENST00000613943 NUCB2P80303 420 aa24.03■■□□□ 1.44
SMARCD2-212ENST00000613943 SASH1O94885 1247 aa24.02■■□□□ 1.44
SMARCD2-212ENST00000613943 LARP6Q9BRS8 491 aaKnown RBP24.02■■□□□ 1.44
SMARCD2-212ENST00000613943 CCDC8Q9H0W5 538 aaPredicted RBP24.02■■□□□ 1.44
SMARCD2-212ENST00000613943 TLR7Q9NYK1 1049 aaKnown RBP24.02■■□□□ 1.44
SMARCD2-212ENST00000613943 COL18A1P39060 1754 aa24.02■■□□□ 1.44
SMARCD2-212ENST00000613943 NEURL1BA8MQ27 555 aa24.02■■□□□ 1.44
SMARCD2-212ENST00000613943 IFIT2P09913 472 aaKnown RBP24.01■■□□□ 1.43
SMARCD2-212ENST00000613943 DCAF5Q96JK2 942 aa24.01■■□□□ 1.43
SMARCD2-212ENST00000613943 HSPA4P34932 840 aa24.01■■□□□ 1.43
SMARCD2-212ENST00000613943 BRINP3Q76B58 766 aa24.01■■□□□ 1.43
SMARCD2-212ENST00000613943 DCCP43146 1447 aa24■■□□□ 1.43
SMARCD2-212ENST00000613943 GLRX3O76003 335 aaKnown RBP24■■□□□ 1.43
SMARCD2-212ENST00000613943 EAF2Q96CJ1 260 aaPredicted RBP24■■□□□ 1.43
SMARCD2-212ENST00000613943 CWC22Q9HCG8 908 aaKnown RBP24■■□□□ 1.43
SMARCD2-212ENST00000613943 CABP4P57796 275 aa24■■□□□ 1.43
SMARCD2-212ENST00000613943 ANAPC15P60006 121 aa24■■□□□ 1.43
SMARCD2-212ENST00000613943 LARP1Q6PKG0 1096 aaKnown RBP24■■□□□ 1.43
SMARCD2-212ENST00000613943 CLEC17AQ6ZS10 378 aa24■■□□□ 1.43
SMARCD2-212ENST00000613943 LRP10Q7Z4F1 713 aa24■■□□□ 1.43
SMARCD2-212ENST00000613943 RASEFQ8IZ41 740 aa24■■□□□ 1.43
SMARCD2-212ENST00000613943 LSG1Q9H089 658 aaKnown RBP24■■□□□ 1.43
SMARCD2-212ENST00000613943 ECHDC1Q9NTX5 307 aa24■■□□□ 1.43
SMARCD2-212ENST00000613943 DDX49Q9Y6V7 483 aaKnown RBP24■■□□□ 1.43
SMARCD2-212ENST00000613943 SCN11AQ9UI33 1791 aa23.99■■□□□ 1.43
SMARCD2-212ENST00000613943 ATP5J2-PTCD1G3V325 749 aa23.99■■□□□ 1.43
SMARCD2-212ENST00000613943 GOLGA6L22H0YM25 854 aa23.99■■□□□ 1.43
SMARCD2-212ENST00000613943 PTCD1O75127 700 aaKnown RBP23.99■■□□□ 1.43
SMARCD2-212ENST00000613943 GCKRQ14397 625 aa23.99■■□□□ 1.43
SMARCD2-212ENST00000613943 RAD50Q92878 1312 aa23.99■■□□□ 1.43
SMARCD2-212ENST00000613943 SNRPA1P09661 255 aaKnown RBP23.99■■□□□ 1.43
SMARCD2-212ENST00000613943 NEXNQ0ZGT2 675 aa23.99■■□□□ 1.43
SMARCD2-212ENST00000613943 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.99■■□□□ 1.43
SMARCD2-212ENST00000613943 UTYO14607 1347 aa23.98■■□□□ 1.43
SMARCD2-212ENST00000613943 TTC41PQ6P2S7 1318 aa23.98■■□□□ 1.43
SMARCD2-212ENST00000613943 CPA1P15085 419 aa23.98■■□□□ 1.43
SMARCD2-212ENST00000613943 ANKRD13DQ6ZTN6 518 aa23.98■■□□□ 1.43
SMARCD2-212ENST00000613943 USP42Q9H9J4 1324 aaKnown RBP23.98■■□□□ 1.43
SMARCD2-212ENST00000613943 DTNBO60941 627 aa23.98■■□□□ 1.43
SMARCD2-212ENST00000613943 G3BP1Q13283 466 aaKnown RBP eCLIP23.98■■□□□ 1.43
SMARCD2-212ENST00000613943 METTL22Q9BUU2 404 aaPredicted RBP23.98■■□□□ 1.43
SMARCD2-212ENST00000613943 PRDM11Q9NQV5 511 aa23.98■■□□□ 1.43
SMARCD2-212ENST00000613943 NCLP19338 710 aaKnown RBP23.97■■□□□ 1.43
SMARCD2-212ENST00000613943 GRPEL1Q9HAV7 217 aa23.97■■□□□ 1.43
SMARCD2-212ENST00000613943 DIAPH3Q9NSV4 1193 aa23.97■■□□□ 1.43
SMARCD2-212ENST00000613943 SNX14Q9Y5W7 946 aa23.97■■□□□ 1.43
SMARCD2-212ENST00000613943 FMNL2Q96PY5 1086 aa23.96■■□□□ 1.43
SMARCD2-212ENST00000613943 CRYBG1Q9Y4K1 1723 aa23.96■■□□□ 1.43
SMARCD2-212ENST00000613943 PTH1RQ03431 593 aa23.96■■□□□ 1.43
SMARCD2-212ENST00000613943 SKOR2Q2VWA4 1001 aaPredicted RBP23.96■■□□□ 1.43
SMARCD2-212ENST00000613943 FOXD4L6Q3SYB3 417 aaPredicted RBP23.96■■□□□ 1.43
SMARCD2-212ENST00000613943 FOXD4L3Q6VB84 417 aaPredicted RBP23.96■■□□□ 1.43
SMARCD2-212ENST00000613943 TOM1L2Q6ZVM7 507 aa23.96■■□□□ 1.43
SMARCD2-212ENST00000613943 LMTK3Q96Q04 1460 aa23.96■■□□□ 1.43
SMARCD2-212ENST00000613943 PRPF40AO75400 957 aaKnown RBP23.95■■□□□ 1.42
SMARCD2-212ENST00000613943 UBE3BQ7Z3V4 1068 aa23.95■■□□□ 1.42
SMARCD2-212ENST00000613943 ERC1Q8IUD2 1116 aa23.95■■□□□ 1.42
SMARCD2-212ENST00000613943 DDX54Q8TDD1 881 aaKnown RBP23.95■■□□□ 1.42
SMARCD2-212ENST00000613943 LMBRD1Q9NUN5 540 aa23.95■■□□□ 1.42
SMARCD2-212ENST00000613943 KIAA1211Q6ZU35 1233 aa23.94■■□□□ 1.42
SMARCD2-212ENST00000613943 BOLA2Q9H3K6 86 aa23.94■■□□□ 1.42
SMARCD2-212ENST00000613943 CUL4AQ13619 759 aa23.94■■□□□ 1.42
SMARCD2-212ENST00000613943 FAM227BQ96M60 508 aa23.93■■□□□ 1.42
SMARCD2-212ENST00000613943 MCM2P49736 904 aa23.93■■□□□ 1.42
SMARCD2-212ENST00000613943 MRE11P49959 708 aa23.93■■□□□ 1.42
SMARCD2-212ENST00000613943 KLHL40Q2TBA0 621 aa23.93■■□□□ 1.42
SMARCD2-212ENST00000613943 GPATCH3Q96I76 525 aa23.93■■□□□ 1.42
SMARCD2-212ENST00000613943 CAVIN1Q6NZI2 390 aaKnown RBP23.92■■□□□ 1.42
SMARCD2-212ENST00000613943 HDAC5Q9UQL6 1122 aa23.92■■□□□ 1.42
SMARCD2-212ENST00000613943 EDC3Q96F86 508 aaKnown RBP23.92■■□□□ 1.42
SMARCD2-212ENST00000613943 CPDO75976 1380 aa23.91■■□□□ 1.42
SMARCD2-212ENST00000613943 STRN4Q9NRL3 753 aa23.91■■□□□ 1.42
SMARCD2-212ENST00000613943 NDUFB9Q9Y6M9 179 aa23.91■■□□□ 1.42
SMARCD2-212ENST00000613943 ZNF335Q9H4Z2 1342 aaPredicted RBP23.9■■□□□ 1.42
SMARCD2-212ENST00000613943 NBPF26B4DH59 902 aa23.9■■□□□ 1.42
SMARCD2-212ENST00000613943 PTMSP20962 102 aa23.9■■□□□ 1.42
SMARCD2-212ENST00000613943 ADCK5Q3MIX3 580 aa23.9■■□□□ 1.42
SMARCD2-212ENST00000613943 NBPF14Q5TI25 921 aa23.9■■□□□ 1.42
SMARCD2-212ENST00000613943 PRPF40BQ6NWY9 871 aaKnown RBP23.9■■□□□ 1.42
SMARCD2-212ENST00000613943 NBPF10Q6P3W6 841 aaKnown RBP23.9■■□□□ 1.42
SMARCD2-212ENST00000613943 NBPF15Q8N660 670 aa23.9■■□□□ 1.42
SMARCD2-212ENST00000613943 IL17RAQ96F46 866 aa23.9■■□□□ 1.42
SMARCD2-212ENST00000613943 RBM27Q9P2N5 1060 aaKnown RBP23.9■■□□□ 1.42
SMARCD2-212ENST00000613943 MRC1P22897 1456 aa23.9■■□□□ 1.42
SMARCD2-212ENST00000613943 A0A087WZG4 1122 aa23.89■■□□□ 1.42
SMARCD2-212ENST00000613943 AK2P54819 239 aa23.89■■□□□ 1.42
SMARCD2-212ENST00000613943 COL9A3Q14050 684 aaPredicted RBP23.89■■□□□ 1.41
SMARCD2-212ENST00000613943 GPT2Q8TD30 523 aa23.89■■□□□ 1.41
SMARCD2-212ENST00000613943 EVI5LQ96CN4 794 aa23.89■■□□□ 1.41
SMARCD2-212ENST00000613943 NSFL1CQ9UNZ2 370 aaKnown RBP23.89■■□□□ 1.41
SMARCD2-212ENST00000613943 CCDC9Q9Y3X0 531 aaKnown RBP23.89■■□□□ 1.41
SMARCD2-212ENST00000613943 CASTP20810 708 aaKnown RBP23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms