RNA–Protein interactions for RNA: ENST00000612482.4

SREBF2-209, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 5 BASIC

Gene SREBF2, Length 5,365 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-209ENST00000612482 CEP135Q66GS9 1140 aa22.18■■□□□ 1.14
SREBF2-209ENST00000612482 HYPKQ9NX55 129 aa22.17■■□□□ 1.14
SREBF2-209ENST00000612482 ABCC5O15440 1437 aa22.17■■□□□ 1.14
SREBF2-209ENST00000612482 DYNC1I1O14576 645 aa22.17■■□□□ 1.14
SREBF2-209ENST00000612482 NLRP5P59047 1200 aa22.17■■□□□ 1.14
SREBF2-209ENST00000612482 NUCB1Q02818 461 aa22.17■■□□□ 1.14
SREBF2-209ENST00000612482 ZNF830Q96NB3 372 aaPredicted RBP22.17■■□□□ 1.14
SREBF2-209ENST00000612482 PPP1R42Q7Z4L9 355 aa22.17■■□□□ 1.14
SREBF2-209ENST00000612482 CCDC144CPQ8IYA2 1237 aa22.17■■□□□ 1.14
SREBF2-209ENST00000612482 CCDC194A0A1B0GVG4 234 aa22.17■■□□□ 1.14
SREBF2-209ENST00000612482 FAM83GA6ND36 823 aa22.17■■□□□ 1.14
SREBF2-209ENST00000612482 PPP1R1BQ9UD71 204 aaPredicted RBP22.17■■□□□ 1.14
SREBF2-209ENST00000612482 CETN2P41208 172 aa22.16■■□□□ 1.14
SREBF2-209ENST00000612482 GOPCQ9HD26 462 aa22.16■■□□□ 1.14
SREBF2-209ENST00000612482 BCCIPQ9P287 314 aaKnown RBP eCLIP22.16■■□□□ 1.14
SREBF2-209ENST00000612482 GIMAP7Q8NHV1 300 aa22.16■■□□□ 1.14
SREBF2-209ENST00000612482 NEK1Q96PY6 1258 aa22.16■■□□□ 1.14
SREBF2-209ENST00000612482 TOPBP1Q92547 1522 aa22.16■■□□□ 1.14
SREBF2-209ENST00000612482 POTEJP0CG39 1038 aa22.16■■□□□ 1.14
SREBF2-209ENST00000612482 RAB11FIP4Q86YS3 637 aa22.16■■□□□ 1.14
SREBF2-209ENST00000612482 SMARCC1Q92922 1105 aaPredicted RBP22.16■■□□□ 1.14
SREBF2-209ENST00000612482 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.16■■□□□ 1.14
SREBF2-209ENST00000612482 ORC3Q9UBD5 711 aaPredicted RBP22.16■■□□□ 1.14
SREBF2-209ENST00000612482 CAMSAP2Q08AD1 1489 aa22.16■■□□□ 1.14
SREBF2-209ENST00000612482 ZHX1Q9UKY1 873 aaPredicted RBP22.16■■□□□ 1.14
SREBF2-209ENST00000612482 MAP3K2Q9Y2U5 619 aa22.16■■□□□ 1.14
SREBF2-209ENST00000612482 FGFR1OPO95684 399 aaKnown RBP22.15■■□□□ 1.14
SREBF2-209ENST00000612482 XRCC6P12956 609 aaKnown RBP eCLIP22.15■■□□□ 1.143e-7■■■■■ 27
SREBF2-209ENST00000612482 PRIMPOLQ96LW4 560 aa22.15■■□□□ 1.14
SREBF2-209ENST00000612482 RNF41Q9H4P4 317 aaPredicted RBP22.15■■□□□ 1.14
SREBF2-209ENST00000612482 TMOD3Q9NYL9 352 aa22.15■■□□□ 1.14
SREBF2-209ENST00000612482 ZSCAN22P10073 491 aaPredicted RBP22.15■■□□□ 1.14
SREBF2-209ENST00000612482 IARSP41252 1262 aaKnown RBP22.15■■□□□ 1.14
SREBF2-209ENST00000612482 MTIF2P46199 727 aaKnown RBP22.15■■□□□ 1.14
SREBF2-209ENST00000612482 HAND2P61296 217 aa22.15■■□□□ 1.14
SREBF2-209ENST00000612482 HDAC1Q13547 482 aaPredicted RBP22.15■■□□□ 1.14
SREBF2-209ENST00000612482 PCDHB15Q9Y5E8 787 aa22.15■■□□□ 1.14
SREBF2-209ENST00000612482 SDSP20132 328 aa22.15■■□□□ 1.14
SREBF2-209ENST00000612482 RNF187Q5TA31 235 aaPredicted RBP22.15■■□□□ 1.14
SREBF2-209ENST00000612482 RAB34Q9BZG1 259 aa22.15■■□□□ 1.14
SREBF2-209ENST00000612482 ZSWIM4Q9H7M6 989 aa22.15■■□□□ 1.14
SREBF2-209ENST00000612482 SNAPC4Q5SXM2 1469 aa22.14■■□□□ 1.14
SREBF2-209ENST00000612482 DESP17661 470 aa22.14■■□□□ 1.14
SREBF2-209ENST00000612482 DISP3Q9P2K9 1392 aa22.14■■□□□ 1.14
SREBF2-209ENST00000612482 PCF11O94913 1555 aaKnown RBP22.14■■□□□ 1.14
SREBF2-209ENST00000612482 POTEB2H3BUK9 544 aa22.14■■□□□ 1.13
SREBF2-209ENST00000612482 NECAB1Q8N987 351 aa22.14■■□□□ 1.13
SREBF2-209ENST00000612482 SNRKQ9NRH2 765 aa22.14■■□□□ 1.13
SREBF2-209ENST00000612482 PODXL2Q9NZ53 605 aa22.14■■□□□ 1.13
SREBF2-209ENST00000612482 PTPN23Q9H3S7 1636 aa22.14■■□□□ 1.13
SREBF2-209ENST00000612482 TMEM266Q2M3C6 531 aa22.14■■□□□ 1.13
SREBF2-209ENST00000612482 SLC5A1P13866 664 aa22.13■■□□□ 1.13
SREBF2-209ENST00000612482 GNG11P61952 73 aa22.13■■□□□ 1.13
SREBF2-209ENST00000612482 DZIP1Q86YF9 867 aaKnown RBP22.13■■□□□ 1.13
SREBF2-209ENST00000612482 GOLGA6L10A0A0M3HER8 536 aa22.13■■□□□ 1.13
SREBF2-209ENST00000612482 GSTTP1A0A1W2PQM5 241 aa22.13■■□□□ 1.13
SREBF2-209ENST00000612482 TRMT112Q9UI30 125 aaKnown RBP22.13■■□□□ 1.13
SREBF2-209ENST00000612482 IFT140Q96RY7 1462 aa22.13■■□□□ 1.13
SREBF2-209ENST00000612482 CATIPQ7Z7H3 387 aa22.13■■□□□ 1.13
SREBF2-209ENST00000612482 PAXBP1Q9Y5B6 917 aa22.13■■□□□ 1.13
SREBF2-209ENST00000612482 GOLGA6L9A6NEM1 432 aa22.13■■□□□ 1.13
SREBF2-209ENST00000612482 CAVIN2O95810 425 aa22.13■■□□□ 1.13
SREBF2-209ENST00000612482 MICU3Q86XE3 530 aa22.13■■□□□ 1.13
SREBF2-209ENST00000612482 ZNF444Q8N0Y2 327 aaPredicted RBP22.13■■□□□ 1.13
SREBF2-209ENST00000612482 CNPY2Q9Y2B0 182 aa22.12■■□□□ 1.13
SREBF2-209ENST00000612482 CCDC150Q8NCX0 1101 aa22.12■■□□□ 1.13
SREBF2-209ENST00000612482 HLTFQ14527 1009 aaKnown RBP eCLIP22.12■■□□□ 1.13
SREBF2-209ENST00000612482 BMS1Q14692 1282 aaKnown RBP22.12■■□□□ 1.13
SREBF2-209ENST00000612482 TMEM67Q5HYA8 995 aa22.12■■□□□ 1.13
SREBF2-209ENST00000612482 SPECC1Q5M775 1068 aa22.12■■□□□ 1.13
SREBF2-209ENST00000612482 CCDC102BQ68D86 513 aa22.12■■□□□ 1.13
SREBF2-209ENST00000612482 CCDC12Q8WUD4 166 aaPredicted RBP22.12■■□□□ 1.13
SREBF2-209ENST00000612482 PI4KAP2A4QPH2 592 aa22.11■■□□□ 1.13
SREBF2-209ENST00000612482 CTR9Q6PD62 1173 aa22.11■■□□□ 1.13
SREBF2-209ENST00000612482 PI4KAP1Q8N8J0 262 aa22.11■■□□□ 1.13
SREBF2-209ENST00000612482 ANKRD18BA2A2Z9 1011 aa22.11■■□□□ 1.13
SREBF2-209ENST00000612482 CLCN1P35523 988 aa22.11■■□□□ 1.13
SREBF2-209ENST00000612482 CCDC91Q7Z6B0 441 aa22.11■■□□□ 1.13
SREBF2-209ENST00000612482 CRACR2BQ8N4Y2 399 aaPredicted RBP22.11■■□□□ 1.13
SREBF2-209ENST00000612482 ALS2CR12Q96Q35 445 aa22.11■■□□□ 1.13
SREBF2-209ENST00000612482 HMG20BQ9P0W2 317 aa22.11■■□□□ 1.13
SREBF2-209ENST00000612482 WASLO00401 505 aaPredicted RBP22.11■■□□□ 1.13
SREBF2-209ENST00000612482 LMAN1P49257 510 aa22.11■■□□□ 1.13
SREBF2-209ENST00000612482 ZNF652Q9Y2D9 606 aa22.11■■□□□ 1.13
SREBF2-209ENST00000612482 ZBTB3Q9H5J0 574 aa22.1■■□□□ 1.13
SREBF2-209ENST00000612482 USP48Q86UV5 1035 aa22.1■■□□□ 1.13
SREBF2-209ENST00000612482 IL16Q14005 1332 aa22.1■■□□□ 1.13
SREBF2-209ENST00000612482 METAP2P50579 478 aaKnown RBP eCLIP22.1■■□□□ 1.131e-6■■■□□ 14.6
SREBF2-209ENST00000612482 NOLC1Q14978 699 aaKnown RBP eCLIP22.1■■□□□ 1.132e-13■□□□□ 9.6
SREBF2-209ENST00000612482 CTNNBL1Q8WYA6 563 aaPredicted RBP22.1■■□□□ 1.13
SREBF2-209ENST00000612482 BRF1Q92994 677 aa22.1■■□□□ 1.13
SREBF2-209ENST00000612482 ZSCAN16Q9H4T2 348 aaPredicted RBP22.1■■□□□ 1.13
SREBF2-209ENST00000612482 CCDC96Q2M329 555 aa22.09■■□□□ 1.13
SREBF2-209ENST00000612482 MRC2Q9UBG0 1479 aa22.09■■□□□ 1.13
SREBF2-209ENST00000612482 SCAF11Q99590 1463 aaKnown RBP22.09■■□□□ 1.13
SREBF2-209ENST00000612482 TNIP1Q15025 636 aa22.09■■□□□ 1.13
SREBF2-209ENST00000612482 ANO6Q4KMQ2 910 aa22.09■■□□□ 1.13
SREBF2-209ENST00000612482 MACROD2A1Z1Q3 448 aa22.09■■□□□ 1.13
SREBF2-209ENST00000612482 NEBLO76041 1014 aa22.09■■□□□ 1.13
SREBF2-209ENST00000612482 IDEP14735 1019 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms