RNA–Protein interactions for RNA: ENST00000612199.4

SRGAP2B-204, Transcript of SLIT-ROBO Rho GTPase activating protein 2B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRGAP2B, Length 7,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2B-204ENST00000612199 RAB11FIP3O75154 756 aa11□□□□□ -0.65
SRGAP2B-204ENST00000612199 IGHMBP2P38935 993 aaKnown RBP11□□□□□ -0.65
SRGAP2B-204ENST00000612199 CCDC83Q8IWF9 413 aa11□□□□□ -0.65
SRGAP2B-204ENST00000612199 EPB41L2O43491 1005 aaKnown RBP11□□□□□ -0.65
SRGAP2B-204ENST00000612199 TTC30AQ86WT1 665 aa11□□□□□ -0.65
SRGAP2B-204ENST00000612199 PROCA1Q8NCQ7 364 aaPredicted RBP11□□□□□ -0.65
SRGAP2B-204ENST00000612199 TNMDQ9H2S6 317 aa11□□□□□ -0.65
SRGAP2B-204ENST00000612199 FERMT2Q96AC1 680 aa11□□□□□ -0.65
SRGAP2B-204ENST00000612199 RBM28Q9NW13 759 aaKnown RBP11□□□□□ -0.65
SRGAP2B-204ENST00000612199 MAP3K2Q9Y2U5 619 aa11□□□□□ -0.65
SRGAP2B-204ENST00000612199 TTC36A6NLP5 189 aa11□□□□□ -0.65
SRGAP2B-204ENST00000612199 TNNT1P13805 278 aa11□□□□□ -0.65
SRGAP2B-204ENST00000612199 RAB3IL1Q8TBN0 382 aa11□□□□□ -0.65
SRGAP2B-204ENST00000612199 NCKAP5LQ9HCH0 1330 aa11□□□□□ -0.65
SRGAP2B-204ENST00000612199 AIDAQ96BJ3 306 aa11□□□□□ -0.65
SRGAP2B-204ENST00000612199 CFAP45Q9UL16 551 aa11□□□□□ -0.65
SRGAP2B-204ENST00000612199 RIOK3O14730 519 aaKnown RBP10.99□□□□□ -0.65
SRGAP2B-204ENST00000612199 MAP10Q9P2G4 905 aa10.99□□□□□ -0.65
SRGAP2B-204ENST00000612199 MAGEC2Q9UBF1 373 aaPredicted RBP10.99□□□□□ -0.65
SRGAP2B-204ENST00000612199 CDKL5O76039 1030 aa10.99□□□□□ -0.65
SRGAP2B-204ENST00000612199 TTC30BQ8N4P2 665 aa10.99□□□□□ -0.65
SRGAP2B-204ENST00000612199 ANKRD24Q8TF21 1146 aa10.99□□□□□ -0.65
SRGAP2B-204ENST00000612199 HINFPQ9BQA5 517 aa10.99□□□□□ -0.65
SRGAP2B-204ENST00000612199 UBAC1Q9BSL1 405 aa10.99□□□□□ -0.65
SRGAP2B-204ENST00000612199 TRMT112Q9UI30 125 aaKnown RBP10.99□□□□□ -0.65
SRGAP2B-204ENST00000612199 KIF20AO95235 890 aa10.99□□□□□ -0.65
SRGAP2B-204ENST00000612199 IFIT1P09914 478 aaKnown RBP10.99□□□□□ -0.65
SRGAP2B-204ENST00000612199 CCDC82Q8N4S0 544 aa10.99□□□□□ -0.65
SRGAP2B-204ENST00000612199 SMARCE1Q969G3 411 aa10.99□□□□□ -0.65
SRGAP2B-204ENST00000612199 SPATA32Q96LK8 384 aa10.99□□□□□ -0.65
SRGAP2B-204ENST00000612199 IRAK4Q9NWZ3 460 aa10.99□□□□□ -0.65
SRGAP2B-204ENST00000612199 TNNQ9UQP3 1299 aa10.99□□□□□ -0.65
SRGAP2B-204ENST00000612199 TAF3Q5VWG9 929 aa10.98□□□□□ -0.65
SRGAP2B-204ENST00000612199 UBE3BQ7Z3V4 1068 aa10.98□□□□□ -0.65
SRGAP2B-204ENST00000612199 MINDY4BA8MYZ0 360 aa10.98□□□□□ -0.65
SRGAP2B-204ENST00000612199 TNRQ92752 1358 aa10.98□□□□□ -0.65
SRGAP2B-204ENST00000612199 ERLIN2O94905 339 aa10.98□□□□□ -0.65
SRGAP2B-204ENST00000612199 KMT5BQ4FZB7 885 aa10.98□□□□□ -0.65
SRGAP2B-204ENST00000612199 TMOD2Q9NZR1 351 aa10.98□□□□□ -0.65
SRGAP2B-204ENST00000612199 PPFIA3O75145 1194 aa10.98□□□□□ -0.65
SRGAP2B-204ENST00000612199 GTPBP4Q9BZE4 634 aaKnown RBP10.98□□□□□ -0.65
SRGAP2B-204ENST00000612199 DACH1Q9UI36 760 aa10.98□□□□□ -0.65
SRGAP2B-204ENST00000612199 CAPN15O75808 1086 aa10.97□□□□□ -0.65
SRGAP2B-204ENST00000612199 IFIT5Q13325 482 aaKnown RBP10.97□□□□□ -0.65
SRGAP2B-204ENST00000612199 ERCC4Q92889 916 aaPredicted RBP10.97□□□□□ -0.65
SRGAP2B-204ENST00000612199 SNRKQ9NRH2 765 aa10.97□□□□□ -0.65
SRGAP2B-204ENST00000612199 IL16Q14005 1332 aa10.97□□□□□ -0.65
SRGAP2B-204ENST00000612199 SLC39A6Q13433 755 aa10.97□□□□□ -0.65
SRGAP2B-204ENST00000612199 SKIV2LQ15477 1246 aaKnown RBP10.97□□□□□ -0.65
SRGAP2B-204ENST00000612199 CEP57L1Q8IYX8 460 aa10.97□□□□□ -0.65
SRGAP2B-204ENST00000612199 PCDHB15Q9Y5E8 787 aa10.97□□□□□ -0.65
SRGAP2B-204ENST00000612199 SATB1Q01826 763 aa10.97□□□□□ -0.65
SRGAP2B-204ENST00000612199 PPP1R42Q7Z4L9 355 aa10.97□□□□□ -0.65
SRGAP2B-204ENST00000612199 MEIS3Q99687 375 aa10.97□□□□□ -0.65
SRGAP2B-204ENST00000612199 TTC21BQ7Z4L5 1316 aa10.97□□□□□ -0.65
SRGAP2B-204ENST00000612199 UBE4AQ14139 1066 aa10.97□□□□□ -0.65
SRGAP2B-204ENST00000612199 CABLES1Q8TDN4 633 aa10.97□□□□□ -0.65
SRGAP2B-204ENST00000612199 NGLY1Q96IV0 654 aa10.97□□□□□ -0.65
SRGAP2B-204ENST00000612199 TESK2Q96S53 571 aa10.97□□□□□ -0.65
SRGAP2B-204ENST00000612199 A2MP01023 1474 aa10.97□□□□□ -0.65
SRGAP2B-204ENST00000612199 PRAG1Q86YV5 1406 aa10.97□□□□□ -0.65
SRGAP2B-204ENST00000612199 ESPNB1AK53 854 aa10.97□□□□□ -0.65
SRGAP2B-204ENST00000612199 GUCY1B3Q02153 619 aa10.97□□□□□ -0.65
SRGAP2B-204ENST00000612199 BMS1Q14692 1282 aaKnown RBP10.97□□□□□ -0.65
SRGAP2B-204ENST00000612199 IMMTQ16891 758 aaKnown RBP10.97□□□□□ -0.65
SRGAP2B-204ENST00000612199 C8orf58Q8NAV2 365 aa10.97□□□□□ -0.65
SRGAP2B-204ENST00000612199 HYPKQ9NX55 129 aa10.97□□□□□ -0.65
SRGAP2B-204ENST00000612199 MACROD2A1Z1Q3 448 aa10.96□□□□□ -0.65
SRGAP2B-204ENST00000612199 NUP62CLQ9H1M0 184 aa10.96□□□□□ -0.65
SRGAP2B-204ENST00000612199 ITM2BQ9Y287 266 aa10.96□□□□□ -0.65
SRGAP2B-204ENST00000612199 MYCP01106 439 aaPredicted RBP10.96□□□□□ -0.65
SRGAP2B-204ENST00000612199 LMAN1P49257 510 aa10.96□□□□□ -0.65
SRGAP2B-204ENST00000612199 CAMK4Q16566 473 aa10.96□□□□□ -0.65
SRGAP2B-204ENST00000612199 KRT24Q2M2I5 525 aa10.96□□□□□ -0.65
SRGAP2B-204ENST00000612199 TBC1D2Q9BYX2 928 aa10.96□□□□□ -0.65
SRGAP2B-204ENST00000612199 EIF3JO75822 258 aaKnown RBP10.96□□□□□ -0.65
SRGAP2B-204ENST00000612199 CARD14Q9BXL6 1004 aa10.96□□□□□ -0.65
SRGAP2B-204ENST00000612199 TBC1D9Q6ZT07 1266 aa10.96□□□□□ -0.66
SRGAP2B-204ENST00000612199 EXOC5O00471 708 aa10.96□□□□□ -0.66
SRGAP2B-204ENST00000612199 SERPINC1P01008 464 aa10.96□□□□□ -0.66
SRGAP2B-204ENST00000612199 XRCC6P12956 609 aaKnown RBP eCLIP10.96□□□□□ -0.66
SRGAP2B-204ENST00000612199 IFNL2Q8IZJ0 200 aa10.96□□□□□ -0.66
SRGAP2B-204ENST00000612199 CTNNBL1Q8WYA6 563 aaPredicted RBP10.96□□□□□ -0.66
SRGAP2B-204ENST00000612199 LRRC59Q96AG4 307 aaKnown RBP10.96□□□□□ -0.66
SRGAP2B-204ENST00000612199 ANKRD36BQ8N2N9 1353 aa10.95□□□□□ -0.66
SRGAP2B-204ENST00000612199 SYCE3A1L190 88 aa10.95□□□□□ -0.66
SRGAP2B-204ENST00000612199 ZPR1O75312 459 aa10.95□□□□□ -0.66
SRGAP2B-204ENST00000612199 ATP6V1E1P36543 226 aa10.95□□□□□ -0.66
SRGAP2B-204ENST00000612199 BMP2KLQ5H9B9 411 aa10.95□□□□□ -0.66
SRGAP2B-204ENST00000612199 POLKQ9UBT6 870 aa10.95□□□□□ -0.66
SRGAP2B-204ENST00000612199 PTPRCP08575 1304 aa10.95□□□□□ -0.66
SRGAP2B-204ENST00000612199 SPATA24Q86W54 205 aa10.95□□□□□ -0.66
SRGAP2B-204ENST00000612199 CHPF2Q9P2E5 772 aa10.95□□□□□ -0.66
SRGAP2B-204ENST00000612199 SH2B1Q9NRF2 756 aaPredicted RBP10.95□□□□□ -0.66
SRGAP2B-204ENST00000612199 NOL7Q9UMY1 257 aaKnown RBP10.95□□□□□ -0.66
SRGAP2B-204ENST00000612199 PPIP5K1Q6PFW1 1433 aa10.95□□□□□ -0.66
SRGAP2B-204ENST00000612199 LPXNO60711 386 aa10.95□□□□□ -0.66
SRGAP2B-204ENST00000612199 ZBTB33Q86T24 672 aa10.95□□□□□ -0.66
SRGAP2B-204ENST00000612199 TICAM2Q86XR7 235 aa10.95□□□□□ -0.66
SRGAP2B-204ENST00000612199 RALGAPBQ86X10 1494 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms