RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 EDC4Q6P2E9 1401 aaKnown RBP14.56□□□□□ -0.08
CDH1-212ENST00000611625 PTCD1O75127 700 aaKnown RBP14.56□□□□□ -0.08
CDH1-212ENST00000611625 F13A1P00488 732 aa14.56□□□□□ -0.08
CDH1-212ENST00000611625 SFPQP23246 707 aaKnown RBP eCLIP14.56□□□□□ -0.08
CDH1-212ENST00000611625 HS1BP3Q53T59 392 aa14.56□□□□□ -0.08
CDH1-212ENST00000611625 NUP133Q8WUM0 1156 aa14.56□□□□□ -0.08
CDH1-212ENST00000611625 NEK1Q96PY6 1258 aa14.56□□□□□ -0.08
CDH1-212ENST00000611625 AKAP2Q9Y2D5 859 aa14.56□□□□□ -0.08
CDH1-212ENST00000611625 PLXNC1O60486 1568 aa14.56□□□□□ -0.08
CDH1-212ENST00000611625 TXLNAP40222 546 aa14.56□□□□□ -0.08
CDH1-212ENST00000611625 FAM177A1Q8N128 213 aaPredicted RBP14.56□□□□□ -0.08
CDH1-212ENST00000611625 CCDC66A2RUB6 948 aa14.55□□□□□ -0.08
CDH1-212ENST00000611625 ALDH1L1O75891 902 aa14.55□□□□□ -0.08
CDH1-212ENST00000611625 TCEANC2Q96MN5 208 aa14.55□□□□□ -0.08
CDH1-212ENST00000611625 EYA1Q99502 592 aa14.55□□□□□ -0.08
CDH1-212ENST00000611625 MPHOSPH8Q99549 860 aa14.55□□□□□ -0.08
CDH1-212ENST00000611625 MTMR7Q9Y216 660 aa14.55□□□□□ -0.08
CDH1-212ENST00000611625 CHL1O00533 1208 aa14.55□□□□□ -0.08
CDH1-212ENST00000611625 DYNC1I1O14576 645 aa14.55□□□□□ -0.08
CDH1-212ENST00000611625 PIP4K2AP48426 406 aaPredicted RBP14.55□□□□□ -0.08
CDH1-212ENST00000611625 CCT2P78371 535 aaKnown RBP14.55□□□□□ -0.08
CDH1-212ENST00000611625 PPFIBP1Q86W92 1011 aa14.55□□□□□ -0.08
CDH1-212ENST00000611625 KIF2AO00139 706 aaPredicted RBP14.55□□□□□ -0.08
CDH1-212ENST00000611625 RAD21O60216 631 aa14.55□□□□□ -0.08
CDH1-212ENST00000611625 CFAP100Q494V2 611 aa14.55□□□□□ -0.08
CDH1-212ENST00000611625 UBE3BQ7Z3V4 1068 aa14.55□□□□□ -0.08
CDH1-212ENST00000611625 FSIP1Q8NA03 581 aa14.55□□□□□ -0.08
CDH1-212ENST00000611625 METTL24Q5JXM2 366 aa14.55□□□□□ -0.08
CDH1-212ENST00000611625 MYO5CQ9NQX4 1742 aa14.55□□□□□ -0.08
CDH1-212ENST00000611625 C16orf45Q96MC5 204 aaPredicted RBP14.54□□□□□ -0.08
CDH1-212ENST00000611625 MAP3K19Q56UN5 1328 aa14.54□□□□□ -0.08
CDH1-212ENST00000611625 TDO2P48775 406 aa14.54□□□□□ -0.08
CDH1-212ENST00000611625 TNNT1P13805 278 aa14.54□□□□□ -0.08
CDH1-212ENST00000611625 AK2P54819 239 aa14.54□□□□□ -0.08
CDH1-212ENST00000611625 GNL3LQ9NVN8 582 aaKnown RBP14.54□□□□□ -0.08
CDH1-212ENST00000611625 DNM1Q05193 864 aaKnown RBP14.54□□□□□ -0.08
CDH1-212ENST00000611625 TRPM2O94759 1503 aa14.53□□□□□ -0.08
CDH1-212ENST00000611625 TTC41PQ6P2S7 1318 aa14.53□□□□□ -0.08
CDH1-212ENST00000611625 GOLIM4O00461 696 aa14.53□□□□□ -0.08
CDH1-212ENST00000611625 AIDAQ96BJ3 306 aa14.53□□□□□ -0.08
CDH1-212ENST00000611625 PRIMPOLQ96LW4 560 aa14.53□□□□□ -0.08
CDH1-212ENST00000611625 ZNF830Q96NB3 372 aaPredicted RBP14.53□□□□□ -0.08
CDH1-212ENST00000611625 CEP89Q96ST8 783 aa14.53□□□□□ -0.08
CDH1-212ENST00000611625 TTC37Q6PGP7 1564 aa14.53□□□□□ -0.08
CDH1-212ENST00000611625 SLC3A2P08195 630 aaKnown RBP14.53□□□□□ -0.08
CDH1-212ENST00000611625 KSR2Q6VAB6 950 aa14.53□□□□□ -0.08
CDH1-212ENST00000611625 WASF1Q92558 559 aa14.53□□□□□ -0.08
CDH1-212ENST00000611625 UBAC1Q9BSL1 405 aa14.53□□□□□ -0.08
CDH1-212ENST00000611625 CFAP65Q6ZU64 1925 aaKnown RBP14.53□□□□□ -0.08
CDH1-212ENST00000611625 ATP5J2-PTCD1G3V325 749 aa14.53□□□□□ -0.08
CDH1-212ENST00000611625 GRM8O00222 908 aa14.53□□□□□ -0.08
CDH1-212ENST00000611625 CAVIN2O95810 425 aa14.53□□□□□ -0.08
CDH1-212ENST00000611625 KIF18AQ8NI77 898 aa14.53□□□□□ -0.08
CDH1-212ENST00000611625 ABCC4O15439 1325 aa14.52□□□□□ -0.08
CDH1-212ENST00000611625 STX1AQ16623 288 aa14.52□□□□□ -0.08
CDH1-212ENST00000611625 ANKRD24Q8TF21 1146 aa14.52□□□□□ -0.08
CDH1-212ENST00000611625 NAP1L1P55209 391 aaKnown RBP14.52□□□□□ -0.08
CDH1-212ENST00000611625 CAGE1Q8TC20 777 aa14.52□□□□□ -0.08
CDH1-212ENST00000611625 FAM200AQ8TCP9 573 aa14.52□□□□□ -0.08
CDH1-212ENST00000611625 BRF1Q92994 677 aa14.52□□□□□ -0.08
CDH1-212ENST00000611625 PA2G4Q9UQ80 394 aaKnown RBP14.52□□□□□ -0.08
CDH1-212ENST00000611625 MAP3K5Q99683 1374 aa14.52□□□□□ -0.09
CDH1-212ENST00000611625 NEMFO60524 1076 aa14.52□□□□□ -0.09
CDH1-212ENST00000611625 OFD1O75665 1012 aa14.52□□□□□ -0.09
CDH1-212ENST00000611625 GOLGA8BA8MQT2 603 aa14.52□□□□□ -0.09
CDH1-212ENST00000611625 NOLC1Q14978 699 aaKnown RBP eCLIP14.52□□□□□ -0.09
CDH1-212ENST00000611625 NOL7Q9UMY1 257 aaKnown RBP14.52□□□□□ -0.09
CDH1-212ENST00000611625 ERCC4Q92889 916 aaPredicted RBP14.51□□□□□ -0.09
CDH1-212ENST00000611625 RUFY1Q96T51 708 aa14.51□□□□□ -0.09
CDH1-212ENST00000611625 RBSNQ9H1K0 784 aa14.51□□□□□ -0.09
CDH1-212ENST00000611625 ZSCAN16Q9H4T2 348 aaPredicted RBP14.51□□□□□ -0.09
CDH1-212ENST00000611625 MAGEC2Q9UBF1 373 aaPredicted RBP14.51□□□□□ -0.09
CDH1-212ENST00000611625 PDE4CQ08493 712 aa14.51□□□□□ -0.09
CDH1-212ENST00000611625 DDX46Q7L014 1031 aaKnown RBP14.51□□□□□ -0.09
CDH1-212ENST00000611625 UBXN4Q92575 508 aa14.51□□□□□ -0.09
CDH1-212ENST00000611625 JARID2Q92833 1246 aaPredicted RBP14.51□□□□□ -0.09
CDH1-212ENST00000611625 CBX1P83916 185 aa14.5□□□□□ -0.09
CDH1-212ENST00000611625 AKAP4Q5JQC9 854 aa14.5□□□□□ -0.09
CDH1-212ENST00000611625 ANKRD13DQ6ZTN6 518 aa14.5□□□□□ -0.09
CDH1-212ENST00000611625 CCAR1Q8IX12 1150 aaKnown RBP14.5□□□□□ -0.09
CDH1-212ENST00000611625 TTC12Q9H892 705 aaPredicted RBP14.5□□□□□ -0.09
CDH1-212ENST00000611625 MYOM2P54296 1465 aa14.5□□□□□ -0.09
CDH1-212ENST00000611625 ZNF213O14771 459 aa14.5□□□□□ -0.09
CDH1-212ENST00000611625 LINS1Q8NG48 757 aa14.5□□□□□ -0.09
CDH1-212ENST00000611625 PLEKHF1Q96S99 279 aa14.5□□□□□ -0.09
CDH1-212ENST00000611625 PHAXQ9H814 394 aaKnown RBP14.5□□□□□ -0.09
CDH1-212ENST00000611625 PREX2Q70Z35 1606 aa14.5□□□□□ -0.09
CDH1-212ENST00000611625 IFNL2Q8IZJ0 200 aa14.5□□□□□ -0.09
CDH1-212ENST00000611625 AK7Q96M32 723 aa14.5□□□□□ -0.09
CDH1-212ENST00000611625 DACT1Q9NYF0 836 aa14.5□□□□□ -0.09
CDH1-212ENST00000611625 ZNF445P59923 1031 aa14.5□□□□□ -0.09
CDH1-212ENST00000611625 NMIQ13287 307 aaPredicted RBP14.5□□□□□ -0.09
CDH1-212ENST00000611625 IFIT5Q13325 482 aaKnown RBP14.5□□□□□ -0.09
CDH1-212ENST00000611625 STARD3NLO95772 234 aa14.49□□□□□ -0.09
CDH1-212ENST00000611625 ZBTB3Q9H5J0 574 aa14.49□□□□□ -0.09
CDH1-212ENST00000611625 TRMT1Q9NXH9 659 aaKnown RBP14.49□□□□□ -0.09
CDH1-212ENST00000611625 XAGE3Q8WTP9 111 aa14.49□□□□□ -0.09
CDH1-212ENST00000611625 PPFIA3O75145 1194 aa14.49□□□□□ -0.09
CDH1-212ENST00000611625 GSPT1P15170 499 aaKnown RBP14.49□□□□□ -0.09
CDH1-212ENST00000611625 SYT1P21579 422 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms