RNA–Protein interactions for RNA: ENST00000611577.4

MUC1-224, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-224ENST00000611577 CNBD1Q8NA66 436 aa23.31■■□□□ 1.32
MUC1-224ENST00000611577 POTECB2RU33 542 aa23.3■■□□□ 1.32
MUC1-224ENST00000611577 A1BGP04217 495 aa23.3■■□□□ 1.32
MUC1-224ENST00000611577 SETDB2Q96T68 719 aa23.3■■□□□ 1.32
MUC1-224ENST00000611577 CAMTA2O94983 1202 aa23.29■■□□□ 1.32
MUC1-224ENST00000611577 TAOK3Q9H2K8 898 aa23.29■■□□□ 1.32
MUC1-224ENST00000611577 MRS2Q9HD23 443 aa23.29■■□□□ 1.32
MUC1-224ENST00000611577 CAPN15O75808 1086 aa23.28■■□□□ 1.32
MUC1-224ENST00000611577 ST5P78524 1137 aa23.28■■□□□ 1.32
MUC1-224ENST00000611577 TNS4Q8IZW8 715 aa23.28■■□□□ 1.32
MUC1-224ENST00000611577 PHACTR3Q96KR7 559 aa23.28■■□□□ 1.32
MUC1-224ENST00000611577 FER1L6Q2WGJ9 1857 aa23.28■■□□□ 1.32
MUC1-224ENST00000611577 CEMIPQ8WUJ3 1361 aa23.27■■□□□ 1.32
MUC1-224ENST00000611577 HSPA1AP0DMV8 641 aaKnown RBP23.27■■□□□ 1.32
MUC1-224ENST00000611577 HSPA1BP0DMV9 641 aaKnown RBP23.27■■□□□ 1.32
MUC1-224ENST00000611577 CNKSR1Q969H4 720 aa23.27■■□□□ 1.32
MUC1-224ENST00000611577 LTBP3Q9NS15 1303 aa23.27■■□□□ 1.32
MUC1-224ENST00000611577 DICER1Q9UPY3 1922 aaKnown RBP23.26■■□□□ 1.31
MUC1-224ENST00000611577 BTBD11A6QL63 1104 aa23.26■■□□□ 1.31
MUC1-224ENST00000611577 KCNQ3O43525 872 aa23.26■■□□□ 1.31
MUC1-224ENST00000611577 STYK1Q6J9G0 422 aa23.26■■□□□ 1.31
MUC1-224ENST00000611577 DZIP3Q86Y13 1208 aaKnown RBP23.26■■□□□ 1.31
MUC1-224ENST00000611577 BCORQ6W2J9 1755 aa23.26■■□□□ 1.31
MUC1-224ENST00000611577 PRPF40BQ6NWY9 871 aaKnown RBP23.25■■□□□ 1.31
MUC1-224ENST00000611577 SRGNP10124 158 aa23.24■■□□□ 1.31
MUC1-224ENST00000611577 RTF1Q92541 710 aaKnown RBP23.24■■□□□ 1.31
MUC1-224ENST00000611577 MASTLQ96GX5 879 aa23.24■■□□□ 1.31
MUC1-224ENST00000611577 PIP4K2AP48426 406 aaPredicted RBP23.23■■□□□ 1.31
MUC1-224ENST00000611577 SOGA3Q5TF21 947 aa23.23■■□□□ 1.31
MUC1-224ENST00000611577 DIEXFQ68CQ4 756 aaKnown RBP23.23■■□□□ 1.31
MUC1-224ENST00000611577 SLX4Q8IY92 1834 aa23.23■■□□□ 1.31
MUC1-224ENST00000611577 CACNA1SQ13698 1873 aa23.23■■□□□ 1.31
MUC1-224ENST00000611577 DDNO94850 711 aaPredicted RBP23.22■■□□□ 1.31
MUC1-224ENST00000611577 CCDC184Q52MB2 194 aa23.22■■□□□ 1.31
MUC1-224ENST00000611577 CHADLQ6NUI6 762 aa23.22■■□□□ 1.31
MUC1-224ENST00000611577 CCDC146Q8IYE0 955 aa23.22■■□□□ 1.31
MUC1-224ENST00000611577 PLEKHF1Q96S99 279 aa23.22■■□□□ 1.31
MUC1-224ENST00000611577 ADAMTS8Q9UP79 889 aa23.22■■□□□ 1.31
MUC1-224ENST00000611577 ARFGEF2Q9Y6D5 1785 aa23.22■■□□□ 1.31
MUC1-224ENST00000611577 NBPF5PQ86XG9 351 aaPredicted RBP23.21■■□□□ 1.31
MUC1-224ENST00000611577 USP16Q9Y5T5 823 aa23.21■■□□□ 1.31
MUC1-224ENST00000611577 DLG5Q8TDM6 1919 aa23.21■■□□□ 1.31
MUC1-224ENST00000611577 PRAMEF22A3QJZ6 481 aa23.2■■□□□ 1.3
MUC1-224ENST00000611577 POTEIP0CG38 1075 aa23.2■■□□□ 1.3
MUC1-224ENST00000611577 POTEJP0CG39 1038 aa23.2■■□□□ 1.3
MUC1-224ENST00000611577 RUNDC1Q96C34 613 aa23.19■■□□□ 1.3
MUC1-224ENST00000611577 CREBZFQ9NS37 354 aa23.19■■□□□ 1.3
MUC1-224ENST00000611577 ZNF652Q9Y2D9 606 aa23.19■■□□□ 1.3
MUC1-224ENST00000611577 NFE2L2Q16236 605 aa23.18■■□□□ 1.3
MUC1-224ENST00000611577 SNRPA1P09661 255 aaKnown RBP23.17■■□□□ 1.3
MUC1-224ENST00000611577 CCDC93Q567U6 631 aa23.17■■□□□ 1.3
MUC1-224ENST00000611577 CLEC4GQ6UXB4 293 aa23.17■■□□□ 1.3
MUC1-224ENST00000611577 MKRN1Q9UHC7 482 aaKnown RBP23.17■■□□□ 1.3
MUC1-224ENST00000611577 IQCA1LA6NCM1 817 aa23.16■■□□□ 1.3
MUC1-224ENST00000611577 MCM10Q7L590 875 aa23.16■■□□□ 1.3
MUC1-224ENST00000611577 HTATSF1O43719 755 aaKnown RBP23.15■■□□□ 1.3
MUC1-224ENST00000611577 NPR1P16066 1061 aa23.15■■□□□ 1.3
MUC1-224ENST00000611577 C7orf43Q8WVR3 580 aa23.15■■□□□ 1.3
MUC1-224ENST00000611577 NIP7Q9Y221 180 aaKnown RBP eCLIP23.14■■□□□ 1.29
MUC1-224ENST00000611577 FAM177BA6PVY3 158 aa23.13■■□□□ 1.29
MUC1-224ENST00000611577 RIPK4P57078 832 aa23.13■■□□□ 1.29
MUC1-224ENST00000611577 NEUROD2Q15784 382 aa23.13■■□□□ 1.29
MUC1-224ENST00000611577 TPTE2Q6XPS3 522 aa23.13■■□□□ 1.29
MUC1-224ENST00000611577 LDHDQ86WU2 507 aa23.13■■□□□ 1.29
MUC1-224ENST00000611577 PNISRQ8TF01 805 aaKnown RBP23.13■■□□□ 1.29
MUC1-224ENST00000611577 L3MBTL3Q96JM7 780 aaPredicted RBP23.13■■□□□ 1.29
MUC1-224ENST00000611577 NBPF26B4DH59 902 aa23.12■■□□□ 1.29
MUC1-224ENST00000611577 TMPOP42166 694 aaKnown RBP23.12■■□□□ 1.29
MUC1-224ENST00000611577 FKBP4Q02790 459 aaKnown RBP eCLIP23.12■■□□□ 1.29
MUC1-224ENST00000611577 LMOD3Q0VAK6 560 aa23.12■■□□□ 1.29
MUC1-224ENST00000611577 DCTN1Q14203 1278 aa23.12■■□□□ 1.29
MUC1-224ENST00000611577 NBPF10Q6P3W6 841 aaKnown RBP23.12■■□□□ 1.29
MUC1-224ENST00000611577 FAM9BQ8IZU0 186 aa23.12■■□□□ 1.29
MUC1-224ENST00000611577 NBPF15Q8N660 670 aa23.12■■□□□ 1.29
MUC1-224ENST00000611577 TAF1DQ9H5J8 278 aaPredicted RBP23.12■■□□□ 1.29
MUC1-224ENST00000611577 ZNF277Q9NRM2 450 aaPredicted RBP23.12■■□□□ 1.29
MUC1-224ENST00000611577 RRP7AQ9Y3A4 280 aaKnown RBP23.12■■□□□ 1.29
MUC1-224ENST00000611577 ZNF541Q9H0D2 1346 aa23.11■■□□□ 1.29
MUC1-224ENST00000611577 KLRG2A4D1S0 409 aaPredicted RBP23.11■■□□□ 1.29
MUC1-224ENST00000611577 OLFM4Q6UX06 510 aa23.11■■□□□ 1.29
MUC1-224ENST00000611577 PASKQ96RG2 1323 aa23.1■■□□□ 1.29
MUC1-224ENST00000611577 SCN4AP35499 1836 aa23.1■■□□□ 1.29
MUC1-224ENST00000611577 CNTNAP1P78357 1384 aa23.1■■□□□ 1.29
MUC1-224ENST00000611577 RGL2O15211 777 aa23.09■■□□□ 1.29
MUC1-224ENST00000611577 EAPPQ56P03 285 aaPredicted RBP23.09■■□□□ 1.29
MUC1-224ENST00000611577 RTKN2Q8IZC4 609 aa23.08■■□□□ 1.29
MUC1-224ENST00000611577 CCER2I3L3R5 266 aa23.07■■□□□ 1.28
MUC1-224ENST00000611577 GTF2E1P29083 439 aaPredicted RBP23.07■■□□□ 1.28
MUC1-224ENST00000611577 HLFQ16534 295 aa23.07■■□□□ 1.28
MUC1-224ENST00000611577 HACL1Q9UJ83 578 aa23.07■■□□□ 1.28
MUC1-224ENST00000611577 APAF1O14727 1248 aa23.06■■□□□ 1.28
MUC1-224ENST00000611577 LAMB4A4D0S4 1761 aa23.05■■□□□ 1.28
MUC1-224ENST00000611577 ALDH1B1P30837 517 aa23.05■■□□□ 1.28
MUC1-224ENST00000611577 IARSP41252 1262 aaKnown RBP23.05■■□□□ 1.28
MUC1-224ENST00000611577 CLEC11AQ9Y240 323 aa23.05■■□□□ 1.28
MUC1-224ENST00000611577 TMEM88BA6NKF7 163 aa23.04■■□□□ 1.28
MUC1-224ENST00000611577 FOXN1O15353 648 aa23.04■■□□□ 1.28
MUC1-224ENST00000611577 EPHX2P34913 555 aa23.04■■□□□ 1.28
MUC1-224ENST00000611577 TAF7Q15545 349 aaPredicted RBP23.04■■□□□ 1.28
MUC1-224ENST00000611577 SYNE4Q8N205 404 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms