RNA–Protein interactions for RNA: ENST00000611150.3

CDK11B-205, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best)

Gene CDK11B, Length 2,350 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-205ENST00000611150 ARHGEF12Q9NZN5 1544 aa20.15■□□□□ 0.82
CDK11B-205ENST00000611150 MYBL2P10244 700 aa20.15■□□□□ 0.82
CDK11B-205ENST00000611150 RLBP1P12271 317 aa20.15■□□□□ 0.82
CDK11B-205ENST00000611150 TSHZ1Q6ZSZ6 1077 aa20.15■□□□□ 0.82
CDK11B-205ENST00000611150 CTCFLQ8NI51 663 aaPredicted RBP20.15■□□□□ 0.82
CDK11B-205ENST00000611150 ZNF483Q8TF39 744 aaPredicted RBP20.15■□□□□ 0.82
CDK11B-205ENST00000611150 ST20-MTHFSA0A0A6YYL1 179 aa20.14■□□□□ 0.82
CDK11B-205ENST00000611150 ST18O60284 1047 aa20.14■□□□□ 0.82
CDK11B-205ENST00000611150 GRIK3Q13003 919 aa20.14■□□□□ 0.82
CDK11B-205ENST00000611150 ZNF777Q9ULD5 760 aaPredicted RBP20.14■□□□□ 0.82
CDK11B-205ENST00000611150 NF2P35240 595 aa20.14■□□□□ 0.81
CDK11B-205ENST00000611150 RINLQ6ZS11 566 aa20.14■□□□□ 0.81
CDK11B-205ENST00000611150 JPH2Q9BR39 696 aaPredicted RBP20.14■□□□□ 0.81
CDK11B-205ENST00000611150 ATP10AO60312 1499 aa20.14■□□□□ 0.81
CDK11B-205ENST00000611150 ICA1Q05084 483 aa20.13■□□□□ 0.81
CDK11B-205ENST00000611150 ARMC2Q8NEN0 867 aa20.13■□□□□ 0.81
CDK11B-205ENST00000611150 N4BP2L2Q92802 583 aaPredicted RBP20.13■□□□□ 0.81
CDK11B-205ENST00000611150 L2HGDHQ9H9P8 463 aa20.13■□□□□ 0.81
CDK11B-205ENST00000611150 TRAPPC8Q9Y2L5 1435 aa20.13■□□□□ 0.81
CDK11B-205ENST00000611150 HECW2Q9P2P5 1572 aa20.13■□□□□ 0.81
CDK11B-205ENST00000611150 FOXD4L5Q5VV16 416 aaPredicted RBP20.13■□□□□ 0.81
CDK11B-205ENST00000611150 FOXD4L4Q8WXT5 416 aaPredicted RBP20.13■□□□□ 0.81
CDK11B-205ENST00000611150 DDX11Q96FC9 970 aa20.13■□□□□ 0.81
CDK11B-205ENST00000611150 CFDP1Q9UEE9 299 aaPredicted RBP20.13■□□□□ 0.81
CDK11B-205ENST00000611150 TRAK1Q9UPV9 953 aa20.13■□□□□ 0.81
CDK11B-205ENST00000611150 CAMSAP2Q08AD1 1489 aa20.13■□□□□ 0.81
CDK11B-205ENST00000611150 SAMD9LQ8IVG5 1584 aa20.13■□□□□ 0.81
CDK11B-205ENST00000611150 SIGLEC1Q9BZZ2 1709 aa20.12■□□□□ 0.81
CDK11B-205ENST00000611150 RBBP5Q15291 538 aaKnown RBP20.12■□□□□ 0.81
CDK11B-205ENST00000611150 FOXR1Q6PIV2 292 aa20.12■□□□□ 0.81
CDK11B-205ENST00000611150 THOC1Q96FV9 657 aaKnown RBP20.12■□□□□ 0.81
CDK11B-205ENST00000611150 CCP110O43303 1012 aa20.12■□□□□ 0.81
CDK11B-205ENST00000611150 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.12■□□□□ 0.81
CDK11B-205ENST00000611150 UBXN4Q92575 508 aa20.12■□□□□ 0.81
CDK11B-205ENST00000611150 MCM8Q9UJA3 840 aa20.12■□□□□ 0.81
CDK11B-205ENST00000611150 C9orf84Q5VXU9 1444 aa20.11■□□□□ 0.81
CDK11B-205ENST00000611150 BRD1O95696 1058 aa20.11■□□□□ 0.81
CDK11B-205ENST00000611150 MVPQ14764 893 aaKnown RBP20.11■□□□□ 0.81
CDK11B-205ENST00000611150 CCDC30Q5VVM6 783 aa20.11■□□□□ 0.81
CDK11B-205ENST00000611150 DNAJC14Q6Y2X3 702 aaPredicted RBP20.11■□□□□ 0.81
CDK11B-205ENST00000611150 PRPF38AQ8NAV1 312 aaKnown RBP20.11■□□□□ 0.81
CDK11B-205ENST00000611150 CLIP2Q9UDT6 1046 aa20.11■□□□□ 0.81
CDK11B-205ENST00000611150 MLH3Q9UHC1 1453 aa20.11■□□□□ 0.81
CDK11B-205ENST00000611150 GADD45BO75293 160 aaPredicted RBP20.1■□□□□ 0.81
CDK11B-205ENST00000611150 TBC1D8O95759 1140 aa20.1■□□□□ 0.81
CDK11B-205ENST00000611150 SETSIPP0DME0 302 aa20.1■□□□□ 0.81
CDK11B-205ENST00000611150 PDCD2Q16342 344 aaPredicted RBP20.1■□□□□ 0.81
CDK11B-205ENST00000611150 TBC1D9Q6ZT07 1266 aa20.1■□□□□ 0.81
CDK11B-205ENST00000611150 TRIM74Q86UV6 250 aa20.1■□□□□ 0.81
CDK11B-205ENST00000611150 TRIM73Q86UV7 250 aa20.1■□□□□ 0.81
CDK11B-205ENST00000611150 KDM4CQ9H3R0 1056 aa20.1■□□□□ 0.81
CDK11B-205ENST00000611150 MADDQ8WXG6 1647 aa20.1■□□□□ 0.81
CDK11B-205ENST00000611150 TMCO5BA8MYB1 307 aa20.1■□□□□ 0.81
CDK11B-205ENST00000611150 RDXP35241 583 aaKnown RBP20.1■□□□□ 0.81
CDK11B-205ENST00000611150 PSMD2Q13200 908 aa20.1■□□□□ 0.81
CDK11B-205ENST00000611150 TMTC2Q8N394 836 aa20.1■□□□□ 0.81
CDK11B-205ENST00000611150 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.1■□□□□ 0.815e-19■■■■■ 117.4
CDK11B-205ENST00000611150 RALGAPBQ86X10 1494 aa20.1■□□□□ 0.81
CDK11B-205ENST00000611150 ANKRD65E5RJM6 399 aa20.09■□□□□ 0.81
CDK11B-205ENST00000611150 NEMFO60524 1076 aa20.09■□□□□ 0.81
CDK11B-205ENST00000611150 CPLX2Q6PUV4 134 aaKnown RBP20.09■□□□□ 0.81
CDK11B-205ENST00000611150 LRRC31Q6UY01 552 aa20.09■□□□□ 0.81
CDK11B-205ENST00000611150 CCDC97Q96F63 343 aaPredicted RBP20.09■□□□□ 0.81
CDK11B-205ENST00000611150 ORC3Q9UBD5 711 aaPredicted RBP20.09■□□□□ 0.81
CDK11B-205ENST00000611150 PTPRMP28827 1452 aa20.09■□□□□ 0.81
CDK11B-205ENST00000611150 RARSP54136 660 aaKnown RBP20.09■□□□□ 0.81
CDK11B-205ENST00000611150 SCRN1Q12765 414 aa20.09■□□□□ 0.81
CDK11B-205ENST00000611150 PLEKHO1Q53GL0 409 aaPredicted RBP20.09■□□□□ 0.81
CDK11B-205ENST00000611150 KAT2BQ92831 832 aa20.09■□□□□ 0.81
CDK11B-205ENST00000611150 FUCA2Q9BTY2 467 aa20.09■□□□□ 0.81
CDK11B-205ENST00000611150 USP48Q86UV5 1035 aa20.08■□□□□ 0.81
CDK11B-205ENST00000611150 CCDC34Q96HJ3 373 aa20.08■□□□□ 0.81
CDK11B-205ENST00000611150 SYCP2Q9BX26 1530 aa20.08■□□□□ 0.81
CDK11B-205ENST00000611150 SOS1Q07889 1333 aaPredicted RBP20.08■□□□□ 0.8
CDK11B-205ENST00000611150 SASH3O75995 380 aa20.08■□□□□ 0.8
CDK11B-205ENST00000611150 GPTP24298 496 aa20.08■□□□□ 0.8
CDK11B-205ENST00000611150 CCNHP51946 323 aaPredicted RBP20.08■□□□□ 0.8
CDK11B-205ENST00000611150 SF3A1Q15459 793 aaKnown RBP20.08■□□□□ 0.8
CDK11B-205ENST00000611150 KCNV1Q6PIU1 500 aa20.08■□□□□ 0.8
CDK11B-205ENST00000611150 SUPT6HQ7KZ85 1726 aaKnown RBP20.08■□□□□ 0.8
CDK11B-205ENST00000611150 SMC3Q9UQE7 1217 aa20.08■□□□□ 0.8
CDK11B-205ENST00000611150 PPFIA2O75334 1257 aa20.07■□□□□ 0.8
CDK11B-205ENST00000611150 ABCD1P33897 745 aa20.07■□□□□ 0.8
CDK11B-205ENST00000611150 RPS6KA3P51812 740 aa20.07■□□□□ 0.8
CDK11B-205ENST00000611150 ANKRD18AQ8IVF6 992 aa20.07■□□□□ 0.8
CDK11B-205ENST00000611150 KCNB2Q92953 911 aa20.07■□□□□ 0.8
CDK11B-205ENST00000611150 USP26Q9BXU7 913 aa20.07■□□□□ 0.8
CDK11B-205ENST00000611150 DIP2CQ9Y2E4 1556 aa20.07■□□□□ 0.8
CDK11B-205ENST00000611150 SEC31AO94979 1220 aaKnown RBP20.07■□□□□ 0.8
CDK11B-205ENST00000611150 RPUSD2Q8IZ73 545 aaKnown RBP20.07■□□□□ 0.8
CDK11B-205ENST00000611150 MKL1Q969V6 931 aa20.07■□□□□ 0.8
CDK11B-205ENST00000611150 TMX4Q9H1E5 349 aaPredicted RBP20.07■□□□□ 0.8
CDK11B-205ENST00000611150 HNRNPMP52272 730 aaKnown RBP eCLIP20.06■□□□□ 0.8
CDK11B-205ENST00000611150 NUCB1Q02818 461 aa20.06■□□□□ 0.8
CDK11B-205ENST00000611150 WDR63Q8IWG1 891 aa20.06■□□□□ 0.8
CDK11B-205ENST00000611150 CACTINQ8WUQ7 758 aaKnown RBP20.06■□□□□ 0.8
CDK11B-205ENST00000611150 BAG1Q99933 345 aaPredicted RBP20.06■□□□□ 0.8
CDK11B-205ENST00000611150 AATKQ6ZMQ8 1374 aa20.06■□□□□ 0.8
CDK11B-205ENST00000611150 DDR1Q08345 913 aa20.06■□□□□ 0.8
CDK11B-205ENST00000611150 TSPAN18Q96SJ8 248 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms