RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 CALD1Q05682 793 aaKnown RBP18.76■□□□□ 0.59
TUBE1-208ENST00000604743 HLFQ16534 295 aa18.76■□□□□ 0.59
TUBE1-208ENST00000604743 KIF6Q6ZMV9 814 aa18.76■□□□□ 0.59
TUBE1-208ENST00000604743 TTLL7Q6ZT98 887 aa18.76■□□□□ 0.59
TUBE1-208ENST00000604743 FAM177BA6PVY3 158 aa18.75■□□□□ 0.59
TUBE1-208ENST00000604743 KCNA3P22001 575 aa18.75■□□□□ 0.59
TUBE1-208ENST00000604743 CLEC4GQ6UXB4 293 aa18.75■□□□□ 0.59
TUBE1-208ENST00000604743 IFT57Q9NWB7 429 aa18.75■□□□□ 0.59
TUBE1-208ENST00000604743 NIP7Q9Y221 180 aaKnown RBP eCLIP18.75■□□□□ 0.59
TUBE1-208ENST00000604743 ERBB4Q15303 1308 aa18.74■□□□□ 0.59
TUBE1-208ENST00000604743 ZNF853P0CG23 659 aa18.74■□□□□ 0.59
TUBE1-208ENST00000604743 PROSER3Q2NL68 480 aa18.74■□□□□ 0.59
TUBE1-208ENST00000604743 PRR5LQ6MZQ0 368 aa18.74■□□□□ 0.59
TUBE1-208ENST00000604743 ZBTB3Q9H5J0 574 aa18.74■□□□□ 0.59
TUBE1-208ENST00000604743 PIM2Q9P1W9 311 aa18.74■□□□□ 0.59
TUBE1-208ENST00000604743 MAP3K15Q6ZN16 1313 aa18.74■□□□□ 0.59
TUBE1-208ENST00000604743 ANKRD31Q8N7Z5 1873 aa18.73■□□□□ 0.59
TUBE1-208ENST00000604743 PDIA6Q15084 440 aa18.73■□□□□ 0.59
TUBE1-208ENST00000604743 DUSP27Q5VZP5 1158 aa18.73■□□□□ 0.59
TUBE1-208ENST00000604743 CNBD1Q8NA66 436 aa18.73■□□□□ 0.59
TUBE1-208ENST00000604743 ELL2O00472 640 aaPredicted RBP18.72■□□□□ 0.59
TUBE1-208ENST00000604743 AIMP1Q12904 312 aaKnown RBP18.72■□□□□ 0.59
TUBE1-208ENST00000604743 HDGFL1Q5TGJ6 251 aa18.72■□□□□ 0.59
TUBE1-208ENST00000604743 NBPF5PQ86XG9 351 aaPredicted RBP18.72■□□□□ 0.59
TUBE1-208ENST00000604743 C2CD5Q86YS7 1000 aa18.72■□□□□ 0.59
TUBE1-208ENST00000604743 ST5P78524 1137 aa18.71■□□□□ 0.59
TUBE1-208ENST00000604743 WWC1Q8IX03 1113 aa18.71■□□□□ 0.59
TUBE1-208ENST00000604743 ARFGEF1Q9Y6D6 1849 aa18.7■□□□□ 0.58
TUBE1-208ENST00000604743 ERVV-1B6SEH8 477 aa18.7■□□□□ 0.58
TUBE1-208ENST00000604743 H0YIN7 160 aa18.7■□□□□ 0.58
TUBE1-208ENST00000604743 GPTP24298 496 aa18.7■□□□□ 0.58
TUBE1-208ENST00000604743 CCDC27Q2M243 656 aa18.7■□□□□ 0.58
TUBE1-208ENST00000604743 DALRD3Q5D0E6 543 aaKnown RBP18.7■□□□□ 0.58
TUBE1-208ENST00000604743 ARHGAP27Q6ZUM4 889 aa18.7■□□□□ 0.58
TUBE1-208ENST00000604743 TSR2Q969E8 191 aaKnown RBP18.7■□□□□ 0.58
TUBE1-208ENST00000604743 CHPF2Q9P2E5 772 aa18.7■□□□□ 0.58
TUBE1-208ENST00000604743 DLEC1Q9Y238 1755 aa18.69■□□□□ 0.58
TUBE1-208ENST00000604743 HOXB7P09629 217 aa18.69■□□□□ 0.58
TUBE1-208ENST00000604743 PDE6BP35913 854 aa18.69■□□□□ 0.58
TUBE1-208ENST00000604743 COPS6Q7L5N1 327 aa18.69■□□□□ 0.58
TUBE1-208ENST00000604743 LRP10Q7Z4F1 713 aa18.69■□□□□ 0.58
TUBE1-208ENST00000604743 XAGE3Q8WTP9 111 aa18.69■□□□□ 0.58
TUBE1-208ENST00000604743 BRIP1Q9BX63 1249 aa18.69■□□□□ 0.58
TUBE1-208ENST00000604743 DDX21Q9NR30 783 aaKnown RBP eCLIP18.69■□□□□ 0.58
TUBE1-208ENST00000604743 RGL2O15211 777 aa18.68■□□□□ 0.58
TUBE1-208ENST00000604743 GTF2E1P29083 439 aaPredicted RBP18.68■□□□□ 0.58
TUBE1-208ENST00000604743 TPTE2Q6XPS3 522 aa18.68■□□□□ 0.58
TUBE1-208ENST00000604743 ZNF622Q969S3 477 aaKnown RBP eCLIP18.68■□□□□ 0.581e-6■□□□□ 11
TUBE1-208ENST00000604743 CACNA1SQ13698 1873 aa18.68■□□□□ 0.58
TUBE1-208ENST00000604743 GIGYF2Q6Y7W6 1299 aaKnown RBP18.67■□□□□ 0.58
TUBE1-208ENST00000604743 C8orf58Q8NAV2 365 aa18.67■□□□□ 0.58
TUBE1-208ENST00000604743 COL11A2P13942 1736 aaPredicted RBP18.66■□□□□ 0.58
TUBE1-208ENST00000604743 DBF4Q9UBU7 674 aaPredicted RBP18.66■□□□□ 0.58
TUBE1-208ENST00000604743 NUTM1Q86Y26 1132 aa18.65■□□□□ 0.58
TUBE1-208ENST00000604743 TTLL6Q8N841 843 aa18.65■□□□□ 0.58
TUBE1-208ENST00000604743 ZNF784Q8NCA9 323 aaPredicted RBP18.65■□□□□ 0.58
TUBE1-208ENST00000604743 TSPYL6Q8N831 410 aa18.64■□□□□ 0.57
TUBE1-208ENST00000604743 ZNF219Q9P2Y4 722 aaPredicted RBP18.64■□□□□ 0.57
TUBE1-208ENST00000604743 PDZRN3Q9UPQ7 1066 aa18.64■□□□□ 0.57
TUBE1-208ENST00000604743 UBN2Q6ZU65 1347 aa18.64■□□□□ 0.57
TUBE1-208ENST00000604743 ATP10DQ9P241 1426 aa18.64■□□□□ 0.57
TUBE1-208ENST00000604743 ANKRD36CQ5JPF3 1778 aa18.63■□□□□ 0.57
TUBE1-208ENST00000604743 NCBP3Q53F19 620 aaKnown RBP18.63■□□□□ 0.57
TUBE1-208ENST00000604743 SUSD4Q5VX71 490 aa18.63■□□□□ 0.57
TUBE1-208ENST00000604743 ZNF34Q8IZ26 560 aa18.63■□□□□ 0.57
TUBE1-208ENST00000604743 NYXQ9GZU5 481 aa18.63■□□□□ 0.57
TUBE1-208ENST00000604743 HYPKQ9NX55 129 aa18.63■□□□□ 0.57
TUBE1-208ENST00000604743 ERFEQ4G0M1 354 aa18.62■□□□□ 0.57
TUBE1-208ENST00000604743 ZNF428Q96B54 188 aa18.62■□□□□ 0.57
TUBE1-208ENST00000604743 IL16Q14005 1332 aa18.62■□□□□ 0.57
TUBE1-208ENST00000604743 SRGNP10124 158 aa18.61■□□□□ 0.57
TUBE1-208ENST00000604743 WDR63Q8IWG1 891 aa18.61■□□□□ 0.57
TUBE1-208ENST00000604743 MASTLQ96GX5 879 aa18.61■□□□□ 0.57
TUBE1-208ENST00000604743 CCDC88AQ3V6T2 1871 aa18.6■□□□□ 0.57
TUBE1-208ENST00000604743 SLX4Q8IY92 1834 aa18.6■□□□□ 0.57
TUBE1-208ENST00000604743 TCERG1O14776 1098 aaKnown RBP18.6■□□□□ 0.57
TUBE1-208ENST00000604743 HSP90AB3PQ58FF7 597 aa18.6■□□□□ 0.57
TUBE1-208ENST00000604743 CCDC30Q5VVM6 783 aa18.6■□□□□ 0.57
TUBE1-208ENST00000604743 ANKRD13DQ6ZTN6 518 aa18.6■□□□□ 0.57
TUBE1-208ENST00000604743 PPP1R42Q7Z4L9 355 aa18.6■□□□□ 0.57
TUBE1-208ENST00000604743 PHAXQ9H814 394 aaKnown RBP18.6■□□□□ 0.57
TUBE1-208ENST00000604743 SBF1O95248 1867 aa18.6■□□□□ 0.57
TUBE1-208ENST00000604743 ABCC12Q96J65 1359 aa18.59■□□□□ 0.57
TUBE1-208ENST00000604743 FANCIQ9NVI1 1328 aa18.59■□□□□ 0.57
TUBE1-208ENST00000604743 TCIRG1Q13488 830 aa18.59■□□□□ 0.57
TUBE1-208ENST00000604743 TWISTNBQ3B726 338 aaPredicted RBP18.59■□□□□ 0.57
TUBE1-208ENST00000604743 PARP10Q53GL7 1025 aa18.59■□□□□ 0.57
TUBE1-208ENST00000604743 STYK1Q6J9G0 422 aa18.59■□□□□ 0.57
TUBE1-208ENST00000604743 PLBD2Q8NHP8 589 aa18.59■□□□□ 0.57
TUBE1-208ENST00000604743 CNKSR1Q969H4 720 aa18.59■□□□□ 0.57
TUBE1-208ENST00000604743 UTP14AQ9BVJ6 771 aaKnown RBP18.59■□□□□ 0.57
TUBE1-208ENST00000604743 TNRC6CQ9HCJ0 1690 aaKnown RBP18.59■□□□□ 0.57
TUBE1-208ENST00000604743 ARFGEF2Q9Y6D5 1785 aa18.58■□□□□ 0.57
TUBE1-208ENST00000604743 C21orf2O43822 256 aa18.58■□□□□ 0.56
TUBE1-208ENST00000604743 NTSR2O95665 410 aa18.58■□□□□ 0.56
TUBE1-208ENST00000604743 RASSF7Q02833 373 aa18.58■□□□□ 0.56
TUBE1-208ENST00000604743 RIC3Q7Z5B4 369 aa18.58■□□□□ 0.56
TUBE1-208ENST00000604743 ZNF526Q8TF50 670 aaPredicted RBP18.58■□□□□ 0.56
TUBE1-208ENST00000604743 CCER2I3L3R5 266 aa18.57■□□□□ 0.56
TUBE1-208ENST00000604743 NPR1P16066 1061 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms