RNA–Protein interactions for RNA: ENST00000603633.2

LINC00221-201, long intergenic non-protein coding RNA 221, humanhuman

TSL 2 BASIC

Gene LINC00221, Length 1,656 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00221-201ENST00000603633 TTLL7Q6ZT98 887 aa20.12■□□□□ 0.81
LINC00221-201ENST00000603633 BCL2L12Q9HB09 334 aa20.12■□□□□ 0.81
LINC00221-201ENST00000603633 PARP3Q9Y6F1 533 aa20.12■□□□□ 0.81
LINC00221-201ENST00000603633 UBR3Q6ZT12 1888 aa20.11■□□□□ 0.81
LINC00221-201ENST00000603633 TM4SF1P30408 202 aa20.11■□□□□ 0.81
LINC00221-201ENST00000603633 AIMP1Q12904 312 aaKnown RBP20.11■□□□□ 0.81
LINC00221-201ENST00000603633 MYH14Q7Z406 1995 aaKnown RBP20.11■□□□□ 0.81
LINC00221-201ENST00000603633 DDX58O95786 925 aaKnown RBP20.1■□□□□ 0.81
LINC00221-201ENST00000603633 SLC4A2P04920 1241 aa20.1■□□□□ 0.81
LINC00221-201ENST00000603633 HSP90AB3PQ58FF7 597 aa20.1■□□□□ 0.81
LINC00221-201ENST00000603633 ANKRD13DQ6ZTN6 518 aa20.1■□□□□ 0.81
LINC00221-201ENST00000603633 SETDB2Q96T68 719 aa20.1■□□□□ 0.81
LINC00221-201ENST00000603633 NFIXQ14938 502 aa20.09■□□□□ 0.81
LINC00221-201ENST00000603633 PLBD2Q8NHP8 589 aa20.09■□□□□ 0.81
LINC00221-201ENST00000603633 GIGYF2Q6Y7W6 1299 aaKnown RBP20.08■□□□□ 0.81
LINC00221-201ENST00000603633 ZBTB3Q9H5J0 574 aa20.08■□□□□ 0.81
LINC00221-201ENST00000603633 LAMB4A4D0S4 1761 aa20.08■□□□□ 0.8
LINC00221-201ENST00000603633 TBC1D9BQ66K14 1250 aa20.07■□□□□ 0.8
LINC00221-201ENST00000603633 HLFQ16534 295 aa20.07■□□□□ 0.8
LINC00221-201ENST00000603633 BICDL1Q6ZP65 573 aa20.07■□□□□ 0.8
LINC00221-201ENST00000603633 POLRMTO00411 1230 aaKnown RBP20.06■□□□□ 0.8
LINC00221-201ENST00000603633 TCERG1O14776 1098 aaKnown RBP20.06■□□□□ 0.8
LINC00221-201ENST00000603633 ALDH1L2Q3SY69 923 aa20.06■□□□□ 0.8
LINC00221-201ENST00000603633 RIC3Q7Z5B4 369 aa20.06■□□□□ 0.8
LINC00221-201ENST00000603633 PHAXQ9H814 394 aaKnown RBP20.06■□□□□ 0.8
LINC00221-201ENST00000603633 NIP7Q9Y221 180 aaKnown RBP eCLIP20.06■□□□□ 0.8
LINC00221-201ENST00000603633 DDR1Q08345 913 aa20.05■□□□□ 0.8
LINC00221-201ENST00000603633 CARMIL3Q8ND23 1372 aa20.05■□□□□ 0.8
LINC00221-201ENST00000603633 SERPINB2P05120 415 aa20.04■□□□□ 0.8
LINC00221-201ENST00000603633 FLIIQ13045 1269 aa20.04■□□□□ 0.8
LINC00221-201ENST00000603633 CD2APQ9Y5K6 639 aa20.04■□□□□ 0.8
LINC00221-201ENST00000603633 TUBGCP6Q96RT7 1819 aa20.04■□□□□ 0.8
LINC00221-201ENST00000603633 TCIRG1Q13488 830 aa20.03■□□□□ 0.8
LINC00221-201ENST00000603633 PARP10Q53GL7 1025 aa20.03■□□□□ 0.8
LINC00221-201ENST00000603633 KSR2Q6VAB6 950 aa20.03■□□□□ 0.8
LINC00221-201ENST00000603633 ZNF34Q8IZ26 560 aa20.03■□□□□ 0.8
LINC00221-201ENST00000603633 ATP10DQ9P241 1426 aa20.02■□□□□ 0.8
LINC00221-201ENST00000603633 NPHP1O15259 732 aa20.02■□□□□ 0.8
LINC00221-201ENST00000603633 TPTE2Q6XPS3 522 aa20.02■□□□□ 0.8
LINC00221-201ENST00000603633 NYXQ9GZU5 481 aa20.02■□□□□ 0.8
LINC00221-201ENST00000603633 SRCAPQ6ZRS2 3230 aa20.01■□□□□ 0.79
LINC00221-201ENST00000603633 FKBP5Q13451 457 aaPredicted RBP20.01■□□□□ 0.79
LINC00221-201ENST00000603633 NBPF5PQ86XG9 351 aaPredicted RBP20.01■□□□□ 0.79
LINC00221-201ENST00000603633 SSH1Q8WYL5 1049 aa20.01■□□□□ 0.79
LINC00221-201ENST00000603633 LRP5O75197 1615 aa20.01■□□□□ 0.79
LINC00221-201ENST00000603633 G2E3Q7L622 706 aa20■□□□□ 0.79
LINC00221-201ENST00000603633 PPP1R42Q7Z4L9 355 aa20■□□□□ 0.79
LINC00221-201ENST00000603633 FHDC1Q9C0D6 1143 aaPredicted RBP20■□□□□ 0.79
LINC00221-201ENST00000603633 SMC4Q9NTJ3 1288 aa20■□□□□ 0.79
LINC00221-201ENST00000603633 PI4KAP2A4QPH2 592 aa20■□□□□ 0.79
LINC00221-201ENST00000603633 BRPF1P55201 1214 aaPredicted RBP20■□□□□ 0.79
LINC00221-201ENST00000603633 NEXNQ0ZGT2 675 aa20■□□□□ 0.79
LINC00221-201ENST00000603633 TRIM28Q13263 835 aaKnown RBP20■□□□□ 0.79
LINC00221-201ENST00000603633 MRPL50Q8N5N7 158 aaKnown RBP20■□□□□ 0.79
LINC00221-201ENST00000603633 PI4KAP1Q8N8J0 262 aa20■□□□□ 0.79
LINC00221-201ENST00000603633 CNBD1Q8NA66 436 aa20■□□□□ 0.79
LINC00221-201ENST00000603633 GPTP24298 496 aa19.99■□□□□ 0.79
LINC00221-201ENST00000603633 ST5P78524 1137 aa19.99■□□□□ 0.79
LINC00221-201ENST00000603633 KLHL34Q8N239 644 aa19.99■□□□□ 0.79
LINC00221-201ENST00000603633 SYT17Q9BSW7 474 aa19.99■□□□□ 0.79
LINC00221-201ENST00000603633 METTL22Q9BUU2 404 aaPredicted RBP19.99■□□□□ 0.79
LINC00221-201ENST00000603633 MAP3K2Q9Y2U5 619 aa19.99■□□□□ 0.79
LINC00221-201ENST00000603633 PTPRCP08575 1304 aa19.98■□□□□ 0.79
LINC00221-201ENST00000603633 GTF2E1P29083 439 aaPredicted RBP19.98■□□□□ 0.79
LINC00221-201ENST00000603633 RARSP54136 660 aaKnown RBP19.98■□□□□ 0.79
LINC00221-201ENST00000603633 TGFB2P61812 414 aa19.98■□□□□ 0.79
LINC00221-201ENST00000603633 C4AP0C0L4 1744 aa19.98■□□□□ 0.79
LINC00221-201ENST00000603633 IBTKQ9P2D0 1353 aaPredicted RBP19.98■□□□□ 0.79
LINC00221-201ENST00000603633 RNF123Q5XPI4 1314 aa19.97■□□□□ 0.79
LINC00221-201ENST00000603633 YTHDC1Q96MU7 727 aaKnown RBP19.97■□□□□ 0.79
LINC00221-201ENST00000603633 ISCA1Q9BUE6 129 aa19.97■□□□□ 0.79
LINC00221-201ENST00000603633 PDZRN3Q9UPQ7 1066 aa19.97■□□□□ 0.79
LINC00221-201ENST00000603633 PRR5LQ6MZQ0 368 aa19.97■□□□□ 0.79
LINC00221-201ENST00000603633 NLRP10Q86W26 655 aa19.97■□□□□ 0.79
LINC00221-201ENST00000603633 UTP14AQ9BVJ6 771 aaKnown RBP19.97■□□□□ 0.79
LINC00221-201ENST00000603633 UBN2Q6ZU65 1347 aa19.96■□□□□ 0.79
LINC00221-201ENST00000603633 CCDC191Q8NCU4 936 aa19.96■□□□□ 0.79
LINC00221-201ENST00000603633 DNAAF4Q8WXU2 420 aa19.96■□□□□ 0.79
LINC00221-201ENST00000603633 MYD88Q99836 296 aa19.96■□□□□ 0.79
LINC00221-201ENST00000603633 BRIP1Q9BX63 1249 aa19.96■□□□□ 0.79
LINC00221-201ENST00000603633 SUSD4Q5VX71 490 aa19.95■□□□□ 0.78
LINC00221-201ENST00000603633 BCL2L13Q9BXK5 485 aa19.95■□□□□ 0.78
LINC00221-201ENST00000603633 SCN7AQ01118 1682 aa19.95■□□□□ 0.78
LINC00221-201ENST00000603633 ADCY9O60503 1353 aa19.95■□□□□ 0.78
LINC00221-201ENST00000603633 FAM177BA6PVY3 158 aa19.94■□□□□ 0.78
LINC00221-201ENST00000603633 PDE6BP35913 854 aa19.94■□□□□ 0.78
LINC00221-201ENST00000603633 C10orf71Q711Q0 1435 aa19.94■□□□□ 0.78
LINC00221-201ENST00000603633 KIF16BQ96L93 1317 aa19.94■□□□□ 0.78
LINC00221-201ENST00000603633 ATP5J2-PTCD1G3V325 749 aa19.94■□□□□ 0.78
LINC00221-201ENST00000603633 TRMT112Q9UI30 125 aaKnown RBP19.94■□□□□ 0.78
LINC00221-201ENST00000603633 COL24A1Q17RW2 1714 aa19.93■□□□□ 0.78
LINC00221-201ENST00000603633 NTSR2O95665 410 aa19.93■□□□□ 0.78
LINC00221-201ENST00000603633 HSP90B1P14625 803 aaKnown RBP19.93■□□□□ 0.78
LINC00221-201ENST00000603633 CWC25Q9NXE8 425 aaPredicted RBP19.93■□□□□ 0.78
LINC00221-201ENST00000603633 IPO8O15397 1037 aaKnown RBP19.92■□□□□ 0.78
LINC00221-201ENST00000603633 LINS1Q8NG48 757 aa19.92■□□□□ 0.78
LINC00221-201ENST00000603633 ARHGAP45Q92619 1136 aa19.91■□□□□ 0.78
LINC00221-201ENST00000603633 API5Q9BZZ5 524 aaKnown RBP19.91■□□□□ 0.78
LINC00221-201ENST00000603633 SH3TC1Q8TE82 1336 aa19.91■□□□□ 0.78
LINC00221-201ENST00000603633 ZBTB38Q8NAP3 1195 aaPredicted RBP19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms