RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 BCORQ6W2J9 1755 aa23.94■■□□□ 1.42
CHMP2A-208ENST00000601220 POTECB2RU33 542 aa23.94■■□□□ 1.42
CHMP2A-208ENST00000601220 RGL2O15211 777 aa23.94■■□□□ 1.42
CHMP2A-208ENST00000601220 ZNF219Q9P2Y4 722 aaPredicted RBP23.94■■□□□ 1.42
CHMP2A-208ENST00000601220 TNRC6CQ9HCJ0 1690 aaKnown RBP23.93■■□□□ 1.42
CHMP2A-208ENST00000601220 KLRG2A4D1S0 409 aaPredicted RBP23.93■■□□□ 1.42
CHMP2A-208ENST00000601220 ST5P78524 1137 aa23.93■■□□□ 1.42
CHMP2A-208ENST00000601220 HTRA3P83110 453 aa23.93■■□□□ 1.42
CHMP2A-208ENST00000601220 CNKSR1Q969H4 720 aa23.93■■□□□ 1.42
CHMP2A-208ENST00000601220 LTBP3Q9NS15 1303 aa23.92■■□□□ 1.42
CHMP2A-208ENST00000601220 VEGFAP15692 232 aaPredicted RBP23.92■■□□□ 1.42
CHMP2A-208ENST00000601220 C7orf43Q8WVR3 580 aa23.92■■□□□ 1.42
CHMP2A-208ENST00000601220 MASTLQ96GX5 879 aa23.92■■□□□ 1.42
CHMP2A-208ENST00000601220 PRPF40BQ6NWY9 871 aaKnown RBP23.91■■□□□ 1.42
CHMP2A-208ENST00000601220 NBPF5PQ86XG9 351 aaPredicted RBP23.91■■□□□ 1.42
CHMP2A-208ENST00000601220 SMC1BQ8NDV3 1235 aa23.91■■□□□ 1.42
CHMP2A-208ENST00000601220 HLFQ16534 295 aa23.9■■□□□ 1.42
CHMP2A-208ENST00000601220 ZNF652Q9Y2D9 606 aa23.9■■□□□ 1.42
CHMP2A-208ENST00000601220 NFE2L2Q16236 605 aa23.88■■□□□ 1.41
CHMP2A-208ENST00000601220 ERFEQ4G0M1 354 aa23.88■■□□□ 1.41
CHMP2A-208ENST00000601220 NIP7Q9Y221 180 aaKnown RBP eCLIP23.88■■□□□ 1.41
CHMP2A-208ENST00000601220 WDR90Q96KV7 1748 aa23.87■■□□□ 1.41
CHMP2A-208ENST00000601220 NPHP1O15259 732 aa23.87■■□□□ 1.41
CHMP2A-208ENST00000601220 EIF4A1P60842 406 aaKnown RBP23.87■■□□□ 1.41
CHMP2A-208ENST00000601220 TPTE2Q6XPS3 522 aa23.87■■□□□ 1.41
CHMP2A-208ENST00000601220 PNISRQ8TF01 805 aaKnown RBP23.87■■□□□ 1.41
CHMP2A-208ENST00000601220 KLRG1Q96E93 195 aa23.87■■□□□ 1.41
CHMP2A-208ENST00000601220 TAOK3Q9H2K8 898 aa23.87■■□□□ 1.41
CHMP2A-208ENST00000601220 FER1L6Q2WGJ9 1857 aa23.87■■□□□ 1.41
CHMP2A-208ENST00000601220 SLX4Q8IY92 1834 aa23.87■■□□□ 1.41
CHMP2A-208ENST00000601220 THUMPD2Q9BTF0 503 aaKnown RBP23.86■■□□□ 1.41
CHMP2A-208ENST00000601220 TIAM2Q8IVF5 1701 aa23.86■■□□□ 1.41
CHMP2A-208ENST00000601220 NPR1P16066 1061 aa23.85■■□□□ 1.41
CHMP2A-208ENST00000601220 DPY19L2Q6NUT2 758 aa23.85■■□□□ 1.41
CHMP2A-208ENST00000601220 JMYQ8N9B5 988 aa23.85■■□□□ 1.41
CHMP2A-208ENST00000601220 SOGA3Q5TF21 947 aa23.84■■□□□ 1.41
CHMP2A-208ENST00000601220 CCDC88AQ3V6T2 1871 aa23.83■■□□□ 1.41
CHMP2A-208ENST00000601220 ERVV-1B6SEH8 477 aa23.83■■□□□ 1.41
CHMP2A-208ENST00000601220 NEFMP07197 916 aa23.83■■□□□ 1.41
CHMP2A-208ENST00000601220 KDM3BQ7LBC6 1761 aa23.81■■□□□ 1.4
CHMP2A-208ENST00000601220 FAM177BA6PVY3 158 aa23.81■■□□□ 1.4
CHMP2A-208ENST00000601220 TTLL7Q6ZT98 887 aa23.81■■□□□ 1.4
CHMP2A-208ENST00000601220 DDNO94850 711 aaPredicted RBP23.8■■□□□ 1.4
CHMP2A-208ENST00000601220 OLFM4Q6UX06 510 aa23.8■■□□□ 1.4
CHMP2A-208ENST00000601220 NGEFQ8N5V2 710 aa23.8■■□□□ 1.4
CHMP2A-208ENST00000601220 ARFGEF2Q9Y6D5 1785 aa23.8■■□□□ 1.4
CHMP2A-208ENST00000601220 MAP3K15Q6ZN16 1313 aa23.8■■□□□ 1.4
CHMP2A-208ENST00000601220 DLG5Q8TDM6 1919 aa23.79■■□□□ 1.4
CHMP2A-208ENST00000601220 CCDC93Q567U6 631 aa23.79■■□□□ 1.4
CHMP2A-208ENST00000601220 PNNQ9H307 717 aaKnown RBP23.79■■□□□ 1.4
CHMP2A-208ENST00000601220 RRP7AQ9Y3A4 280 aaKnown RBP23.79■■□□□ 1.4
CHMP2A-208ENST00000601220 DICER1Q9UPY3 1922 aaKnown RBP23.78■■□□□ 1.4
CHMP2A-208ENST00000601220 LAMB4A4D0S4 1761 aa23.78■■□□□ 1.4
CHMP2A-208ENST00000601220 CRY2Q49AN0 593 aa23.78■■□□□ 1.4
CHMP2A-208ENST00000601220 FKBP4Q02790 459 aaKnown RBP eCLIP23.77■■□□□ 1.4
CHMP2A-208ENST00000601220 LRP10Q7Z4F1 713 aa23.77■■□□□ 1.4
CHMP2A-208ENST00000601220 ABCC12Q96J65 1359 aa23.77■■□□□ 1.4
CHMP2A-208ENST00000601220 MYL6BP14649 208 aa23.76■■□□□ 1.39
CHMP2A-208ENST00000601220 NUTM1Q86Y26 1132 aa23.76■■□□□ 1.39
CHMP2A-208ENST00000601220 MAPK8IP3Q9UPT6 1336 aa23.76■■□□□ 1.39
CHMP2A-208ENST00000601220 SNED1Q8TER0 1413 aa23.76■■□□□ 1.39
CHMP2A-208ENST00000601220 POTEIP0CG38 1075 aa23.75■■□□□ 1.39
CHMP2A-208ENST00000601220 POTEJP0CG39 1038 aa23.75■■□□□ 1.39
CHMP2A-208ENST00000601220 ALDH1B1P30837 517 aa23.75■■□□□ 1.39
CHMP2A-208ENST00000601220 PDIA6Q15084 440 aa23.75■■□□□ 1.39
CHMP2A-208ENST00000601220 RALBP1Q15311 655 aa23.75■■□□□ 1.39
CHMP2A-208ENST00000601220 ZNF34Q8IZ26 560 aa23.75■■□□□ 1.39
CHMP2A-208ENST00000601220 NYXQ9GZU5 481 aa23.75■■□□□ 1.39
CHMP2A-208ENST00000601220 ZNF277Q9NRM2 450 aaPredicted RBP23.75■■□□□ 1.39
CHMP2A-208ENST00000601220 UBN2Q6ZU65 1347 aa23.75■■□□□ 1.39
CHMP2A-208ENST00000601220 GTF2E1P29083 439 aaPredicted RBP23.74■■□□□ 1.39
CHMP2A-208ENST00000601220 RTKN2Q8IZC4 609 aa23.74■■□□□ 1.39
CHMP2A-208ENST00000601220 L3MBTL3Q96JM7 780 aaPredicted RBP23.74■■□□□ 1.39
CHMP2A-208ENST00000601220 ERBB4Q15303 1308 aa23.74■■□□□ 1.39
CHMP2A-208ENST00000601220 RIPK4P57078 832 aa23.73■■□□□ 1.39
CHMP2A-208ENST00000601220 SUSD4Q5VX71 490 aa23.73■■□□□ 1.39
CHMP2A-208ENST00000601220 KIF6Q6ZMV9 814 aa23.73■■□□□ 1.39
CHMP2A-208ENST00000601220 ZBTB3Q9H5J0 574 aa23.73■■□□□ 1.39
CHMP2A-208ENST00000601220 GPTP24298 496 aa23.72■■□□□ 1.39
CHMP2A-208ENST00000601220 HOXA10P31260 410 aaPredicted RBP23.72■■□□□ 1.39
CHMP2A-208ENST00000601220 CHADLQ6NUI6 762 aa23.72■■□□□ 1.39
CHMP2A-208ENST00000601220 TSPYL4Q9UJ04 414 aa23.72■■□□□ 1.39
CHMP2A-208ENST00000601220 IBTKQ9P2D0 1353 aaPredicted RBP23.72■■□□□ 1.39
CHMP2A-208ENST00000601220 CACNA1SQ13698 1873 aa23.72■■□□□ 1.39
CHMP2A-208ENST00000601220 RIC1Q4ADV7 1423 aa23.71■■□□□ 1.39
CHMP2A-208ENST00000601220 ZNF541Q9H0D2 1346 aa23.71■■□□□ 1.39
CHMP2A-208ENST00000601220 TMPOP42166 694 aaKnown RBP23.71■■□□□ 1.39
CHMP2A-208ENST00000601220 GIGYF2Q6Y7W6 1299 aaKnown RBP23.71■■□□□ 1.39
CHMP2A-208ENST00000601220 SYNE4Q8N205 404 aa23.71■■□□□ 1.39
CHMP2A-208ENST00000601220 BABAM1Q9NWV8 329 aa23.71■■□□□ 1.39
CHMP2A-208ENST00000601220 NTSR2O95665 410 aa23.7■■□□□ 1.38
CHMP2A-208ENST00000601220 FZD9O00144 591 aa23.69■■□□□ 1.38
CHMP2A-208ENST00000601220 PROSER3Q2NL68 480 aa23.69■■□□□ 1.38
CHMP2A-208ENST00000601220 PSMD1Q99460 953 aa23.69■■□□□ 1.38
CHMP2A-208ENST00000601220 TAF1DQ9H5J8 278 aaPredicted RBP23.69■■□□□ 1.38
CHMP2A-208ENST00000601220 IARSP41252 1262 aaKnown RBP23.68■■□□□ 1.38
CHMP2A-208ENST00000601220 C3orf67Q6ZVT6 689 aa23.68■■□□□ 1.38
CHMP2A-208ENST00000601220 NUP98P52948 1817 aa23.68■■□□□ 1.38
CHMP2A-208ENST00000601220 IQCA1LA6NCM1 817 aa23.67■■□□□ 1.38
CHMP2A-208ENST00000601220 SLC51AQ86UW1 340 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms