RNA–Protein interactions for RNA: ENST00000598808.5

IRF3-221, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-221ENST00000598808 PDIA6Q15084 440 aa25.85■■□□□ 1.73
IRF3-221ENST00000598808 TTLL7Q6ZT98 887 aa25.85■■□□□ 1.73
IRF3-221ENST00000598808 CAMTA2O94983 1202 aa25.85■■□□□ 1.73
IRF3-221ENST00000598808 ZBTB3Q9H5J0 574 aa25.85■■□□□ 1.73
IRF3-221ENST00000598808 ZNF652Q9Y2D9 606 aa25.85■■□□□ 1.73
IRF3-221ENST00000598808 XAGE3Q8WTP9 111 aa25.84■■□□□ 1.73
IRF3-221ENST00000598808 HYPKQ9NX55 129 aa25.83■■□□□ 1.73
IRF3-221ENST00000598808 PARP3Q9Y6F1 533 aa25.83■■□□□ 1.73
IRF3-221ENST00000598808 COPS6Q7L5N1 327 aa25.82■■□□□ 1.72
IRF3-221ENST00000598808 BCL2L12Q9HB09 334 aa25.82■■□□□ 1.72
IRF3-221ENST00000598808 ZBED9Q6R2W3 1325 aa25.82■■□□□ 1.72
IRF3-221ENST00000598808 MAP3K15Q6ZN16 1313 aa25.81■■□□□ 1.72
IRF3-221ENST00000598808 FHDC1Q9C0D6 1143 aaPredicted RBP25.8■■□□□ 1.72
IRF3-221ENST00000598808 VAMP4O75379 141 aa25.79■■□□□ 1.72
IRF3-221ENST00000598808 TBC1D9BQ66K14 1250 aa25.79■■□□□ 1.72
IRF3-221ENST00000598808 NPHP1O15259 732 aa25.79■■□□□ 1.72
IRF3-221ENST00000598808 NFIXQ14938 502 aa25.79■■□□□ 1.72
IRF3-221ENST00000598808 LRP10Q7Z4F1 713 aa25.79■■□□□ 1.72
IRF3-221ENST00000598808 HLFQ16534 295 aa25.78■■□□□ 1.72
IRF3-221ENST00000598808 PHAXQ9H814 394 aaKnown RBP25.78■■□□□ 1.72
IRF3-221ENST00000598808 GTF3C3Q9Y5Q9 886 aa25.78■■□□□ 1.72
IRF3-221ENST00000598808 SLC4A2P04920 1241 aa25.77■■□□□ 1.72
IRF3-221ENST00000598808 DDR1Q08345 913 aa25.77■■□□□ 1.72
IRF3-221ENST00000598808 SETDB2Q96T68 719 aa25.77■■□□□ 1.72
IRF3-221ENST00000598808 NIP7Q9Y221 180 aaKnown RBP eCLIP25.76■■□□□ 1.71
IRF3-221ENST00000598808 FAM177BA6PVY3 158 aa25.75■■□□□ 1.71
IRF3-221ENST00000598808 ERVV-1B6SEH8 477 aa25.75■■□□□ 1.71
IRF3-221ENST00000598808 CLEC4GQ6UXB4 293 aa25.75■■□□□ 1.71
IRF3-221ENST00000598808 SYT17Q9BSW7 474 aa25.75■■□□□ 1.71
IRF3-221ENST00000598808 GPTP24298 496 aa25.74■■□□□ 1.71
IRF3-221ENST00000598808 CARMIL3Q8ND23 1372 aa25.74■■□□□ 1.71
IRF3-221ENST00000598808 POLRMTO00411 1230 aaKnown RBP25.73■■□□□ 1.71
IRF3-221ENST00000598808 TM4SF1P30408 202 aa25.73■■□□□ 1.71
IRF3-221ENST00000598808 RIC3Q7Z5B4 369 aa25.73■■□□□ 1.71
IRF3-221ENST00000598808 TRMT2AQ8IZ69 625 aaKnown RBP25.73■■□□□ 1.71
IRF3-221ENST00000598808 NUP98P52948 1817 aa25.73■■□□□ 1.71
IRF3-221ENST00000598808 DDX58O95786 925 aaKnown RBP25.72■■□□□ 1.71
IRF3-221ENST00000598808 SERPINB2P05120 415 aa25.72■■□□□ 1.71
IRF3-221ENST00000598808 ANKRD13DQ6ZTN6 518 aa25.72■■□□□ 1.71
IRF3-221ENST00000598808 PLBD2Q8NHP8 589 aa25.72■■□□□ 1.71
IRF3-221ENST00000598808 GIGYF2Q6Y7W6 1299 aaKnown RBP25.71■■□□□ 1.71
IRF3-221ENST00000598808 G2E3Q7L622 706 aa25.7■■□□□ 1.7
IRF3-221ENST00000598808 NBPF5PQ86XG9 351 aaPredicted RBP25.7■■□□□ 1.7
IRF3-221ENST00000598808 BCL2L13Q9BXK5 485 aa25.7■■□□□ 1.7
IRF3-221ENST00000598808 UTRNP46939 3433 aa25.7■■□□□ 1.7
IRF3-221ENST00000598808 ARFGEF2Q9Y6D5 1785 aa25.69■■□□□ 1.7
IRF3-221ENST00000598808 FLIIQ13045 1269 aa25.69■■□□□ 1.7
IRF3-221ENST00000598808 FKBP5Q13451 457 aaPredicted RBP25.69■■□□□ 1.7
IRF3-221ENST00000598808 HSP90AB3PQ58FF7 597 aa25.69■■□□□ 1.7
IRF3-221ENST00000598808 CNBD1Q8NA66 436 aa25.69■■□□□ 1.7
IRF3-221ENST00000598808 ATP10DQ9P241 1426 aa25.69■■□□□ 1.7
IRF3-221ENST00000598808 AFDNP55196 1824 aaKnown RBP25.68■■□□□ 1.7
IRF3-221ENST00000598808 RGL2O15211 777 aa25.68■■□□□ 1.7
IRF3-221ENST00000598808 GTF2E1P29083 439 aaPredicted RBP25.68■■□□□ 1.7
IRF3-221ENST00000598808 GOLGB1Q14789 3259 aaKnown RBP25.68■■□□□ 1.7
IRF3-221ENST00000598808 CCDC24Q8N4L8 307 aa25.67■■□□□ 1.7
IRF3-221ENST00000598808 ZNF428Q96B54 188 aa25.67■■□□□ 1.7
IRF3-221ENST00000598808 SMC4Q9NTJ3 1288 aa25.67■■□□□ 1.7
IRF3-221ENST00000598808 ANKRD36CQ5JPF3 1778 aa25.67■■□□□ 1.7
IRF3-221ENST00000598808 C10orf71Q711Q0 1435 aa25.66■■□□□ 1.7
IRF3-221ENST00000598808 ST5P78524 1137 aa25.66■■□□□ 1.7
IRF3-221ENST00000598808 MAP3K2Q9Y2U5 619 aa25.66■■□□□ 1.7
IRF3-221ENST00000598808 CACNA1FO60840 1977 aa25.65■■□□□ 1.7
IRF3-221ENST00000598808 CT47B1P0C2W7 299 aaPredicted RBP25.65■■□□□ 1.7
IRF3-221ENST00000598808 NLGN2Q8NFZ4 835 aa25.65■■□□□ 1.7
IRF3-221ENST00000598808 SSH1Q8WYL5 1049 aa25.65■■□□□ 1.7
IRF3-221ENST00000598808 MYD88Q99836 296 aa25.65■■□□□ 1.7
IRF3-221ENST00000598808 CD2APQ9Y5K6 639 aa25.65■■□□□ 1.7
IRF3-221ENST00000598808 UBN2Q6ZU65 1347 aa25.64■■□□□ 1.7
IRF3-221ENST00000598808 PI4KAP2A4QPH2 592 aa25.64■■□□□ 1.69
IRF3-221ENST00000598808 ATP5J2-PTCD1G3V325 749 aa25.64■■□□□ 1.69
IRF3-221ENST00000598808 TCIRG1Q13488 830 aa25.64■■□□□ 1.69
IRF3-221ENST00000598808 PI4KAP1Q8N8J0 262 aa25.64■■□□□ 1.69
IRF3-221ENST00000598808 PARP10Q53GL7 1025 aa25.63■■□□□ 1.69
IRF3-221ENST00000598808 PRR5LQ6MZQ0 368 aa25.63■■□□□ 1.69
IRF3-221ENST00000598808 KSR2Q6VAB6 950 aa25.63■■□□□ 1.69
IRF3-221ENST00000598808 TPTE2Q6XPS3 522 aa25.63■■□□□ 1.69
IRF3-221ENST00000598808 ZNF34Q8IZ26 560 aa25.63■■□□□ 1.69
IRF3-221ENST00000598808 NYXQ9GZU5 481 aa25.63■■□□□ 1.69
IRF3-221ENST00000598808 PPP1R42Q7Z4L9 355 aa25.62■■□□□ 1.69
IRF3-221ENST00000598808 WWC3Q9ULE0 1092 aa25.62■■□□□ 1.69
IRF3-221ENST00000598808 NRXN2Q9P2S2 1712 aa25.62■■□□□ 1.69
IRF3-221ENST00000598808 NEXNQ0ZGT2 675 aa25.61■■□□□ 1.69
IRF3-221ENST00000598808 SUSD4Q5VX71 490 aa25.61■■□□□ 1.69
IRF3-221ENST00000598808 PELP1Q8IZL8 1130 aaKnown RBP25.61■■□□□ 1.69
IRF3-221ENST00000598808 MRPL50Q8N5N7 158 aaKnown RBP25.61■■□□□ 1.69
IRF3-221ENST00000598808 ADCY9O60503 1353 aa25.61■■□□□ 1.69
IRF3-221ENST00000598808 ALDH1L2Q3SY69 923 aa25.6■■□□□ 1.69
IRF3-221ENST00000598808 NUTM1Q86Y26 1132 aa25.6■■□□□ 1.69
IRF3-221ENST00000598808 NLRP10Q86W26 655 aa25.6■■□□□ 1.69
IRF3-221ENST00000598808 METTL22Q9BUU2 404 aaPredicted RBP25.6■■□□□ 1.69
IRF3-221ENST00000598808 UTP14AQ9BVJ6 771 aaKnown RBP25.6■■□□□ 1.69
IRF3-221ENST00000598808 KIF13BQ9NQT8 1826 aa25.59■■□□□ 1.69
IRF3-221ENST00000598808 F6X3S4 739 aa25.58■■□□□ 1.69
IRF3-221ENST00000598808 DNAAF4Q8WXU2 420 aa25.58■■□□□ 1.69
IRF3-221ENST00000598808 TRMT112Q9UI30 125 aaKnown RBP25.58■■□□□ 1.69
IRF3-221ENST00000598808 N4BP2Q86UW6 1770 aaPredicted RBP25.58■■□□□ 1.68
IRF3-221ENST00000598808 A0A0G2JLW4 131 aa25.57■■□□□ 1.68
IRF3-221ENST00000598808 RARSP54136 660 aaKnown RBP25.57■■□□□ 1.68
IRF3-221ENST00000598808 ERFEQ4G0M1 354 aa25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms