RNA–Protein interactions for RNA: ENST00000598118.1

GRAMD1A-207, Transcript of GRAM domain containing 1A, humanhuman

TSL 1 (best)

Gene GRAMD1A, Length 2,277 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-207ENST00000598118 SUCLG2Q96I99 432 aa23.76■■□□□ 1.39
GRAMD1A-207ENST00000598118 NSFL1CQ9UNZ2 370 aaKnown RBP23.76■■□□□ 1.39
GRAMD1A-207ENST00000598118 SPG7Q9UQ90 795 aa23.76■■□□□ 1.39
GRAMD1A-207ENST00000598118 C5P01031 1676 aa23.76■■□□□ 1.39
GRAMD1A-207ENST00000598118 GLRX3O76003 335 aaKnown RBP23.76■■□□□ 1.39
GRAMD1A-207ENST00000598118 DDX17Q92841 729 aaKnown RBP23.76■■□□□ 1.39
GRAMD1A-207ENST00000598118 RBM27Q9P2N5 1060 aaKnown RBP23.76■■□□□ 1.39
GRAMD1A-207ENST00000598118 SCN11AQ9UI33 1791 aa23.76■■□□□ 1.39
GRAMD1A-207ENST00000598118 C19orf44Q9H6X5 657 aa23.75■■□□□ 1.39
GRAMD1A-207ENST00000598118 GRM8O00222 908 aa23.75■■□□□ 1.39
GRAMD1A-207ENST00000598118 ZNF790Q6PG37 636 aa23.75■■□□□ 1.39
GRAMD1A-207ENST00000598118 KDM6AO15550 1401 aaPredicted RBP23.74■■□□□ 1.39
GRAMD1A-207ENST00000598118 LMTK3Q96Q04 1460 aa23.74■■□□□ 1.39
GRAMD1A-207ENST00000598118 BICC1Q9H694 974 aaKnown RBP23.74■■□□□ 1.39
GRAMD1A-207ENST00000598118 NASPP49321 788 aaPredicted RBP23.73■■□□□ 1.39
GRAMD1A-207ENST00000598118 UTYO14607 1347 aa23.73■■□□□ 1.39
GRAMD1A-207ENST00000598118 MST1RQ04912 1400 aa23.73■■□□□ 1.39
GRAMD1A-207ENST00000598118 TTC14Q96N46 770 aa23.73■■□□□ 1.39
GRAMD1A-207ENST00000598118 ECHDC1Q9NTX5 307 aa23.73■■□□□ 1.39
GRAMD1A-207ENST00000598118 NLRP2Q9NX02 1062 aa23.73■■□□□ 1.39
GRAMD1A-207ENST00000598118 ERBB4Q15303 1308 aa23.73■■□□□ 1.39
GRAMD1A-207ENST00000598118 TCHHQ07283 1943 aa23.73■■□□□ 1.39
GRAMD1A-207ENST00000598118 IGKV5-2P06315 115 aa23.72■■□□□ 1.39
GRAMD1A-207ENST00000598118 RAPGEF4Q8WZA2 1011 aa23.72■■□□□ 1.39
GRAMD1A-207ENST00000598118 SLC52A2Q9HAB3 445 aa23.72■■□□□ 1.39
GRAMD1A-207ENST00000598118 NPHP3Q7Z494 1330 aa23.72■■□□□ 1.39
GRAMD1A-207ENST00000598118 SASH1O94885 1247 aa23.72■■□□□ 1.39
GRAMD1A-207ENST00000598118 NFATC2IPQ8NCF5 419 aa23.72■■□□□ 1.39
GRAMD1A-207ENST00000598118 TMEM63CQ9P1W3 806 aa23.71■■□□□ 1.39
GRAMD1A-207ENST00000598118 DDX58O95786 925 aaKnown RBP23.71■■□□□ 1.39
GRAMD1A-207ENST00000598118 IFIT2P09913 472 aaKnown RBP23.71■■□□□ 1.39
GRAMD1A-207ENST00000598118 MYL6BP14649 208 aa23.71■■□□□ 1.39
GRAMD1A-207ENST00000598118 KIAA1211Q6ZU35 1233 aa23.71■■□□□ 1.39
GRAMD1A-207ENST00000598118 AACSQ86V21 672 aa23.71■■□□□ 1.39
GRAMD1A-207ENST00000598118 ERC1Q8IUD2 1116 aa23.71■■□□□ 1.39
GRAMD1A-207ENST00000598118 PHKG2P15735 406 aa23.7■■□□□ 1.38
GRAMD1A-207ENST00000598118 CLCN1P35523 988 aa23.7■■□□□ 1.38
GRAMD1A-207ENST00000598118 PTH1RQ03431 593 aa23.7■■□□□ 1.38
GRAMD1A-207ENST00000598118 LARP6Q9BRS8 491 aaKnown RBP23.7■■□□□ 1.38
GRAMD1A-207ENST00000598118 MEGF6O75095 1541 aa23.7■■□□□ 1.38
GRAMD1A-207ENST00000598118 DIAPH3Q9NSV4 1193 aa23.7■■□□□ 1.38
GRAMD1A-207ENST00000598118 COL18A1P39060 1754 aa23.69■■□□□ 1.38
GRAMD1A-207ENST00000598118 PRIM1P49642 420 aaKnown RBP23.69■■□□□ 1.38
GRAMD1A-207ENST00000598118 AK2P54819 239 aa23.69■■□□□ 1.38
GRAMD1A-207ENST00000598118 RIC3Q7Z5B4 369 aa23.69■■□□□ 1.38
GRAMD1A-207ENST00000598118 EAF2Q96CJ1 260 aaPredicted RBP23.69■■□□□ 1.38
GRAMD1A-207ENST00000598118 HDAC5Q9UQL6 1122 aa23.69■■□□□ 1.38
GRAMD1A-207ENST00000598118 CPA1P15085 419 aa23.68■■□□□ 1.38
GRAMD1A-207ENST00000598118 CABLES1Q8TDN4 633 aa23.68■■□□□ 1.38
GRAMD1A-207ENST00000598118 RBSNQ9H1K0 784 aa23.68■■□□□ 1.38
GRAMD1A-207ENST00000598118 ESPNB1AK53 854 aa23.67■■□□□ 1.38
GRAMD1A-207ENST00000598118 RUFY3Q7L099 469 aa23.67■■□□□ 1.38
GRAMD1A-207ENST00000598118 XAGE3Q8WTP9 111 aa23.67■■□□□ 1.38
GRAMD1A-207ENST00000598118 ZNF496Q96IT1 587 aaPredicted RBP23.67■■□□□ 1.38
GRAMD1A-207ENST00000598118 PPP1R9BQ96SB3 815 aa23.67■■□□□ 1.38
GRAMD1A-207ENST00000598118 TATP17735 454 aaPredicted RBP23.67■■□□□ 1.38
GRAMD1A-207ENST00000598118 FOXD4L6Q3SYB3 417 aaPredicted RBP23.67■■□□□ 1.38
GRAMD1A-207ENST00000598118 FOXD4L3Q6VB84 417 aaPredicted RBP23.67■■□□□ 1.38
GRAMD1A-207ENST00000598118 KLHDC4Q8TBB5 520 aa23.67■■□□□ 1.38
GRAMD1A-207ENST00000598118 CCDC8Q9H0W5 538 aaPredicted RBP23.67■■□□□ 1.38
GRAMD1A-207ENST00000598118 TLR7Q9NYK1 1049 aaKnown RBP23.67■■□□□ 1.38
GRAMD1A-207ENST00000598118 NEURL1BA8MQ27 555 aa23.66■■□□□ 1.38
GRAMD1A-207ENST00000598118 COPS6Q7L5N1 327 aa23.66■■□□□ 1.38
GRAMD1A-207ENST00000598118 TRIM44Q96DX7 344 aaPredicted RBP23.66■■□□□ 1.38
GRAMD1A-207ENST00000598118 GPATCH3Q96I76 525 aa23.66■■□□□ 1.38
GRAMD1A-207ENST00000598118 RPAP1Q9BWH6 1393 aaPredicted RBP23.66■■□□□ 1.38
GRAMD1A-207ENST00000598118 CCDC173Q0VFZ6 552 aa23.66■■□□□ 1.38
GRAMD1A-207ENST00000598118 G3BP1Q13283 466 aaKnown RBP eCLIP23.66■■□□□ 1.38
GRAMD1A-207ENST00000598118 LARP1Q6PKG0 1096 aaKnown RBP23.66■■□□□ 1.38
GRAMD1A-207ENST00000598118 EVI5LQ96CN4 794 aa23.66■■□□□ 1.38
GRAMD1A-207ENST00000598118 SIL1Q9H173 461 aa23.66■■□□□ 1.38
GRAMD1A-207ENST00000598118 PIP4K2AP48426 406 aaPredicted RBP23.65■■□□□ 1.38
GRAMD1A-207ENST00000598118 ADCK5Q3MIX3 580 aa23.65■■□□□ 1.38
GRAMD1A-207ENST00000598118 EPHA10Q5JZY3 1008 aa23.65■■□□□ 1.38
GRAMD1A-207ENST00000598118 RUFY2Q8WXA3 655 aa23.65■■□□□ 1.38
GRAMD1A-207ENST00000598118 USP16Q9Y5T5 823 aa23.65■■□□□ 1.38
GRAMD1A-207ENST00000598118 CASTP20810 708 aaKnown RBP23.64■■□□□ 1.38
GRAMD1A-207ENST00000598118 GCKRQ14397 625 aa23.64■■□□□ 1.37
GRAMD1A-207ENST00000598118 CHRNA2Q15822 529 aa23.64■■□□□ 1.37
GRAMD1A-207ENST00000598118 LRP10Q7Z4F1 713 aa23.64■■□□□ 1.37
GRAMD1A-207ENST00000598118 MYD88Q99836 296 aa23.64■■□□□ 1.37
GRAMD1A-207ENST00000598118 STRCP1A6NGW2 1772 aa23.63■■□□□ 1.37
GRAMD1A-207ENST00000598118 SYCE3A1L190 88 aa23.63■■□□□ 1.37
GRAMD1A-207ENST00000598118 ATF3P18847 181 aa23.63■■□□□ 1.37
GRAMD1A-207ENST00000598118 PRPF40BQ6NWY9 871 aaKnown RBP23.63■■□□□ 1.37
GRAMD1A-207ENST00000598118 GDPD2Q9HCC8 539 aa23.63■■□□□ 1.37
GRAMD1A-207ENST00000598118 LIMCH1Q9UPQ0 1083 aa23.63■■□□□ 1.37
GRAMD1A-207ENST00000598118 CYP27B1O15528 508 aa23.63■■□□□ 1.37
GRAMD1A-207ENST00000598118 LARGE1O95461 756 aa23.63■■□□□ 1.37
GRAMD1A-207ENST00000598118 IFNL2Q8IZJ0 200 aa23.63■■□□□ 1.37
GRAMD1A-207ENST00000598118 FAM227BQ96M60 508 aa23.63■■□□□ 1.37
GRAMD1A-207ENST00000598118 METTL22Q9BUU2 404 aaPredicted RBP23.63■■□□□ 1.37
GRAMD1A-207ENST00000598118 TMEM94Q12767 1356 aa23.62■■□□□ 1.37
GRAMD1A-207ENST00000598118 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.62■■□□□ 1.37
GRAMD1A-207ENST00000598118 WDR33Q9C0J8 1336 aaKnown RBP23.62■■□□□ 1.37
GRAMD1A-207ENST00000598118 MBD3O95983 291 aa23.62■■□□□ 1.37
GRAMD1A-207ENST00000598118 CSB-PGBD3P0DP91 1061 aa23.62■■□□□ 1.37
GRAMD1A-207ENST00000598118 NEXNQ0ZGT2 675 aa23.62■■□□□ 1.37
GRAMD1A-207ENST00000598118 JARID2Q92833 1246 aaPredicted RBP23.62■■□□□ 1.37
GRAMD1A-207ENST00000598118 LRSAM1Q6UWE0 723 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms