RNA–Protein interactions for RNA: ENST00000595519.5

TRPM4-205, Transcript of transient receptor potential cation channel subfamily M member 4, humanhuman

TSL 1 (best)

Gene TRPM4, Length 3,702 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4-205ENST00000595519 C8orf58Q8NAV2 365 aa17.62■□□□□ 0.41
TRPM4-205ENST00000595519 GOLGA6L19H0YKK7 550 aa17.61■□□□□ 0.41
TRPM4-205ENST00000595519 BICD2Q8TD16 824 aa17.61■□□□□ 0.41
TRPM4-205ENST00000595519 NWD1Q149M9 1564 aa17.61■□□□□ 0.41
TRPM4-205ENST00000595519 HSP90AB2PQ58FF8 381 aa17.61■□□□□ 0.41
TRPM4-205ENST00000595519 TFIP11Q9UBB9 837 aaKnown RBP17.61■□□□□ 0.41
TRPM4-205ENST00000595519 IL1RAPL2Q9NP60 686 aa17.61■□□□□ 0.41
TRPM4-205ENST00000595519 CALCOCO1Q9P1Z2 691 aa17.61■□□□□ 0.41
TRPM4-205ENST00000595519 CRB1P82279 1406 aa17.61■□□□□ 0.41
TRPM4-205ENST00000595519 ELF2Q15723 593 aa17.6■□□□□ 0.41
TRPM4-205ENST00000595519 CCDC83Q8IWF9 413 aa17.6■□□□□ 0.41
TRPM4-205ENST00000595519 NUTM2FA1L443 756 aa17.6■□□□□ 0.41
TRPM4-205ENST00000595519 CCAR2Q8N163 923 aaKnown RBP17.6■□□□□ 0.41
TRPM4-205ENST00000595519 KCNF1Q9H3M0 494 aa17.6■□□□□ 0.41
TRPM4-205ENST00000595519 RGS12O14924 1447 aa17.6■□□□□ 0.41
TRPM4-205ENST00000595519 CEP135Q66GS9 1140 aa17.6■□□□□ 0.41
TRPM4-205ENST00000595519 SULT6B1Q6IMI4 303 aa17.6■□□□□ 0.41
TRPM4-205ENST00000595519 SBNO1A3KN83 1393 aa17.6■□□□□ 0.41
TRPM4-205ENST00000595519 MAP3K19Q56UN5 1328 aa17.59■□□□□ 0.41
TRPM4-205ENST00000595519 BECN2A8MW95 431 aa17.59■□□□□ 0.41
TRPM4-205ENST00000595519 HMMRO75330 724 aa17.59■□□□□ 0.41
TRPM4-205ENST00000595519 DNAJC2Q99543 621 aaKnown RBP17.59■□□□□ 0.41
TRPM4-205ENST00000595519 NOL10Q9BSC4 688 aaKnown RBP17.59■□□□□ 0.41
TRPM4-205ENST00000595519 ATP6V1DQ9Y5K8 247 aa17.59■□□□□ 0.41
TRPM4-205ENST00000595519 MCM2P49736 904 aa17.59■□□□□ 0.41
TRPM4-205ENST00000595519 GNL2Q13823 731 aaKnown RBP17.59■□□□□ 0.41
TRPM4-205ENST00000595519 HOMER1Q86YM7 354 aa17.59■□□□□ 0.41
TRPM4-205ENST00000595519 CLIP2Q9UDT6 1046 aa17.59■□□□□ 0.41
TRPM4-205ENST00000595519 ZNF215Q9UL58 517 aaPredicted RBP17.59■□□□□ 0.41
TRPM4-205ENST00000595519 TPM3P06753 285 aa17.58■□□□□ 0.41
TRPM4-205ENST00000595519 PTPN14Q15678 1187 aa17.58■□□□□ 0.41
TRPM4-205ENST00000595519 MEIS3Q99687 375 aa17.58■□□□□ 0.41
TRPM4-205ENST00000595519 TNMDQ9H2S6 317 aa17.58■□□□□ 0.41
TRPM4-205ENST00000595519 F6X3S4 739 aa17.58■□□□□ 0.4
TRPM4-205ENST00000595519 CHL1O00533 1208 aa17.58■□□□□ 0.4
TRPM4-205ENST00000595519 KIF24Q5T7B8 1368 aa17.58■□□□□ 0.4
TRPM4-205ENST00000595519 ADAMTSL3P82987 1691 aa17.58■□□□□ 0.4
TRPM4-205ENST00000595519 UBE2HP62256 183 aa17.58■□□□□ 0.4
TRPM4-205ENST00000595519 CTNNA3Q9UI47 895 aa17.58■□□□□ 0.4
TRPM4-205ENST00000595519 FLT4P35916 1363 aa17.57■□□□□ 0.4
TRPM4-205ENST00000595519 KIAA0232Q92628 1395 aa17.57■□□□□ 0.4
TRPM4-205ENST00000595519 GABPB1Q06547 395 aaPredicted RBP17.57■□□□□ 0.4
TRPM4-205ENST00000595519 FAM177A1Q8N128 213 aaPredicted RBP17.57■□□□□ 0.4
TRPM4-205ENST00000595519 STX6O43752 255 aa17.57■□□□□ 0.4
TRPM4-205ENST00000595519 NUP62CLQ9H1M0 184 aa17.57■□□□□ 0.4
TRPM4-205ENST00000595519 DCTPP1Q9H773 170 aa17.57■□□□□ 0.4
TRPM4-205ENST00000595519 TERF2Q15554 542 aa17.57■□□□□ 0.4
TRPM4-205ENST00000595519 HTATSF1O43719 755 aaKnown RBP17.56■□□□□ 0.4
TRPM4-205ENST00000595519 IRX3P78415 501 aaPredicted RBP17.56■□□□□ 0.4
TRPM4-205ENST00000595519 FMNL2Q96PY5 1086 aa17.56■□□□□ 0.4
TRPM4-205ENST00000595519 SMTNL1A8MU46 457 aa17.56■□□□□ 0.4
TRPM4-205ENST00000595519 ANO6Q4KMQ2 910 aa17.56■□□□□ 0.4
TRPM4-205ENST00000595519 C10orf67Q8IYJ2 551 aa17.56■□□□□ 0.4
TRPM4-205ENST00000595519 CHMP4CQ96CF2 233 aa17.56■□□□□ 0.4
TRPM4-205ENST00000595519 LTN1O94822 1766 aa17.56■□□□□ 0.4
TRPM4-205ENST00000595519 AP5Z1O43299 807 aa17.56■□□□□ 0.4
TRPM4-205ENST00000595519 MAP3K11Q16584 847 aa17.56■□□□□ 0.4
TRPM4-205ENST00000595519 MIS18AQ9NYP9 233 aa17.56■□□□□ 0.4
TRPM4-205ENST00000595519 KCNA6P17658 529 aa17.55■□□□□ 0.4
TRPM4-205ENST00000595519 IGSF1Q8N6C5 1336 aa17.55■□□□□ 0.4
TRPM4-205ENST00000595519 OS9Q13438 667 aaPredicted RBP17.55■□□□□ 0.4
TRPM4-205ENST00000595519 TOMM22Q9NS69 142 aa17.55■□□□□ 0.4
TRPM4-205ENST00000595519 SLFN14P0C7P3 912 aa17.55■□□□□ 0.4
TRPM4-205ENST00000595519 ZRSR1Q15695 479 aaKnown RBP17.55■□□□□ 0.4
TRPM4-205ENST00000595519 NEK11Q8NG66 645 aa17.55■□□□□ 0.4
TRPM4-205ENST00000595519 PHRF1Q9P1Y6 1649 aaKnown RBP17.55■□□□□ 0.4
TRPM4-205ENST00000595519 ZSCAN22P10073 491 aaPredicted RBP17.54■□□□□ 0.4
TRPM4-205ENST00000595519 SYT1P21579 422 aa17.54■□□□□ 0.4
TRPM4-205ENST00000595519 TAF7LQ5H9L4 462 aa17.54■□□□□ 0.4
TRPM4-205ENST00000595519 SPTLC3Q9NUV7 552 aa17.54■□□□□ 0.4
TRPM4-205ENST00000595519 NUTM1Q86Y26 1132 aa17.54■□□□□ 0.4
TRPM4-205ENST00000595519 NECAB1Q8N987 351 aa17.54■□□□□ 0.4
TRPM4-205ENST00000595519 KIF18AQ8NI77 898 aa17.54■□□□□ 0.4
TRPM4-205ENST00000595519 PDE1AP54750 535 aa17.53■□□□□ 0.4
TRPM4-205ENST00000595519 STK3Q13188 491 aa17.53■□□□□ 0.4
TRPM4-205ENST00000595519 ANKRD7Q92527 254 aa17.53■□□□□ 0.4
TRPM4-205ENST00000595519 DNAJC25Q9H1X3 360 aa17.53■□□□□ 0.4
TRPM4-205ENST00000595519 DDX41Q9UJV9 622 aaKnown RBP17.53■□□□□ 0.4
TRPM4-205ENST00000595519 TEX35Q5T0J7 233 aa17.53■□□□□ 0.4
TRPM4-205ENST00000595519 N4BP2Q86UW6 1770 aaPredicted RBP17.53■□□□□ 0.4
TRPM4-205ENST00000595519 ARID5BQ14865 1188 aa17.52■□□□□ 0.4
TRPM4-205ENST00000595519 SPG7Q9UQ90 795 aa17.52■□□□□ 0.4
TRPM4-205ENST00000595519 ESYT1Q9BSJ8 1104 aa17.52■□□□□ 0.4
TRPM4-205ENST00000595519 FAM208AQ9UK61 1670 aaKnown RBP17.52■□□□□ 0.4
TRPM4-205ENST00000595519 SLC4A2P04920 1241 aa17.52■□□□□ 0.39
TRPM4-205ENST00000595519 ZNF165P49910 485 aa17.52■□□□□ 0.39
TRPM4-205ENST00000595519 ZNF397Q8NF99 534 aaPredicted RBP17.52■□□□□ 0.39
TRPM4-205ENST00000595519 TCEANC2Q96MN5 208 aa17.52■□□□□ 0.39
TRPM4-205ENST00000595519 DACT1Q9NYF0 836 aa17.52■□□□□ 0.39
TRPM4-205ENST00000595519 CWC27Q6UX04 472 aaKnown RBP17.51■□□□□ 0.39
TRPM4-205ENST00000595519 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.51■□□□□ 0.39
TRPM4-205ENST00000595519 TYRO3Q06418 890 aa17.51■□□□□ 0.39
TRPM4-205ENST00000595519 MCM10Q7L590 875 aa17.51■□□□□ 0.39
TRPM4-205ENST00000595519 FAM200AQ8TCP9 573 aa17.51■□□□□ 0.39
TRPM4-205ENST00000595519 CASTP20810 708 aaKnown RBP17.51■□□□□ 0.39
TRPM4-205ENST00000595519 GJB2P29033 226 aa17.51■□□□□ 0.39
TRPM4-205ENST00000595519 HNRNPH2P55795 449 aaKnown RBP17.51■□□□□ 0.39
TRPM4-205ENST00000595519 KMT5BQ4FZB7 885 aa17.51■□□□□ 0.39
TRPM4-205ENST00000595519 LARP1BQ659C4 914 aaKnown RBP17.51■□□□□ 0.39
TRPM4-205ENST00000595519 NFAT5O94916 1531 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms