RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 DIAPH3Q9NSV4 1193 aa19.85■□□□□ 0.77
LIG1-206ENST00000594067 LTN1O94822 1766 aa19.85■□□□□ 0.77
LIG1-206ENST00000594067 DTNBO60941 627 aa19.85■□□□□ 0.77
LIG1-206ENST00000594067 CLASRPQ8N2M8 674 aaKnown RBP19.85■□□□□ 0.77
LIG1-206ENST00000594067 C9orf78Q9NZ63 289 aaPredicted RBP19.85■□□□□ 0.77
LIG1-206ENST00000594067 LIMCH1Q9UPQ0 1083 aa19.85■□□□□ 0.77
LIG1-206ENST00000594067 CNPY2Q9Y2B0 182 aa19.85■□□□□ 0.77
LIG1-206ENST00000594067 CASTP20810 708 aaKnown RBP19.84■□□□□ 0.77
LIG1-206ENST00000594067 PLEKHO1Q53GL0 409 aaPredicted RBP19.84■□□□□ 0.77
LIG1-206ENST00000594067 ESCO1Q5FWF5 840 aa19.84■□□□□ 0.77
LIG1-206ENST00000594067 DBF4Q9UBU7 674 aaPredicted RBP19.84■□□□□ 0.77
LIG1-206ENST00000594067 TTC41PQ6P2S7 1318 aa19.84■□□□□ 0.77
LIG1-206ENST00000594067 CHMP4AQ9BY43 222 aa19.84■□□□□ 0.77
LIG1-206ENST00000594067 USP42Q9H9J4 1324 aaKnown RBP19.84■□□□□ 0.77
LIG1-206ENST00000594067 PTH1RQ03431 593 aa19.83■□□□□ 0.77
LIG1-206ENST00000594067 MAP7D2Q96T17 732 aa19.83■□□□□ 0.77
LIG1-206ENST00000594067 NFAT5O94916 1531 aa19.83■□□□□ 0.76
LIG1-206ENST00000594067 PRAMEF22A3QJZ6 481 aa19.83■□□□□ 0.76
LIG1-206ENST00000594067 LARGE1O95461 756 aa19.83■□□□□ 0.76
LIG1-206ENST00000594067 ZSCAN22P10073 491 aaPredicted RBP19.83■□□□□ 0.76
LIG1-206ENST00000594067 CWF19L2Q2TBE0 894 aaKnown RBP19.83■□□□□ 0.76
LIG1-206ENST00000594067 RNMTO43148 476 aaKnown RBP19.82■□□□□ 0.76
LIG1-206ENST00000594067 SYT1P21579 422 aa19.82■□□□□ 0.76
LIG1-206ENST00000594067 SMC3Q9UQE7 1217 aa19.82■□□□□ 0.76
LIG1-206ENST00000594067 MTX1Q13505 466 aa19.82■□□□□ 0.76
LIG1-206ENST00000594067 ECHDC1Q9NTX5 307 aa19.82■□□□□ 0.76
LIG1-206ENST00000594067 STX6O43752 255 aa19.81■□□□□ 0.76
LIG1-206ENST00000594067 PRPF40BQ6NWY9 871 aaKnown RBP19.81■□□□□ 0.76
LIG1-206ENST00000594067 KCNH5Q8NCM2 988 aa19.81■□□□□ 0.76
LIG1-206ENST00000594067 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.81■□□□□ 0.76
LIG1-206ENST00000594067 KDM3BQ7LBC6 1761 aa19.81■□□□□ 0.76
LIG1-206ENST00000594067 IFIT2P09913 472 aaKnown RBP19.81■□□□□ 0.76
LIG1-206ENST00000594067 ADCK5Q3MIX3 580 aa19.81■□□□□ 0.76
LIG1-206ENST00000594067 C1orf141Q5JVX7 400 aa19.81■□□□□ 0.76
LIG1-206ENST00000594067 DDX54Q8TDD1 881 aaKnown RBP19.81■□□□□ 0.76
LIG1-206ENST00000594067 DYNC1I1O14576 645 aa19.8■□□□□ 0.76
LIG1-206ENST00000594067 PHF14O94880 888 aa19.8■□□□□ 0.76
LIG1-206ENST00000594067 RUFY2Q8WXA3 655 aa19.8■□□□□ 0.76
LIG1-206ENST00000594067 JAKMIP1Q96N16 626 aaKnown RBP19.8■□□□□ 0.76
LIG1-206ENST00000594067 GIGYF1O75420 1035 aaPredicted RBP19.8■□□□□ 0.76
LIG1-206ENST00000594067 SASS6Q6UVJ0 657 aa19.8■□□□□ 0.76
LIG1-206ENST00000594067 KSR2Q6VAB6 950 aa19.8■□□□□ 0.76
LIG1-206ENST00000594067 CCDC83Q8IWF9 413 aa19.8■□□□□ 0.76
LIG1-206ENST00000594067 HYPKQ9NX55 129 aa19.8■□□□□ 0.76
LIG1-206ENST00000594067 ALDH1L1O75891 902 aa19.79■□□□□ 0.76
LIG1-206ENST00000594067 AACSQ86V21 672 aa19.79■□□□□ 0.76
LIG1-206ENST00000594067 TMEM87AQ8NBN3 555 aa19.79■□□□□ 0.76
LIG1-206ENST00000594067 PXDNQ92626 1479 aa19.79■□□□□ 0.76
LIG1-206ENST00000594067 FER1L4A9Z1Z3 1794 aa19.79■□□□□ 0.76
LIG1-206ENST00000594067 PDRG1Q9NUG6 133 aa19.79■□□□□ 0.76
LIG1-206ENST00000594067 F13A1P00488 732 aa19.79■□□□□ 0.76
LIG1-206ENST00000594067 AMOTQ4VCS5 1084 aa19.79■□□□□ 0.76
LIG1-206ENST00000594067 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.79■□□□□ 0.76
LIG1-206ENST00000594067 RGPD2P0DJD1 1756 aa19.78■□□□□ 0.76
LIG1-206ENST00000594067 FIBPO43427 364 aa19.78■□□□□ 0.76
LIG1-206ENST00000594067 GPATCH3Q96I76 525 aa19.78■□□□□ 0.76
LIG1-206ENST00000594067 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.78■□□□□ 0.76
LIG1-206ENST00000594067 PTMAP06454 111 aaKnown RBP19.78■□□□□ 0.76
LIG1-206ENST00000594067 TCHHQ07283 1943 aa19.77■□□□□ 0.76
LIG1-206ENST00000594067 GJB2P29033 226 aa19.77■□□□□ 0.76
LIG1-206ENST00000594067 AIMP1Q12904 312 aaKnown RBP19.77■□□□□ 0.76
LIG1-206ENST00000594067 CCDC183Q5T5S1 534 aa19.77■□□□□ 0.76
LIG1-206ENST00000594067 LMOD2Q6P5Q4 547 aa19.77■□□□□ 0.76
LIG1-206ENST00000594067 SUCLG2Q96I99 432 aa19.77■□□□□ 0.76
LIG1-206ENST00000594067 ERC1Q8IUD2 1116 aa19.77■□□□□ 0.75
LIG1-206ENST00000594067 GCP02774 474 aa19.76■□□□□ 0.75
LIG1-206ENST00000594067 EVI5LQ96CN4 794 aa19.76■□□□□ 0.75
LIG1-206ENST00000594067 KIAA2012Q0VF49 1180 aa19.76■□□□□ 0.75
LIG1-206ENST00000594067 VPS53Q5VIR6 699 aa19.76■□□□□ 0.75
LIG1-206ENST00000594067 ANKRD24Q8TF21 1146 aa19.76■□□□□ 0.75
LIG1-206ENST00000594067 CCDC8Q9H0W5 538 aaPredicted RBP19.76■□□□□ 0.75
LIG1-206ENST00000594067 CYP46A1Q9Y6A2 500 aa19.76■□□□□ 0.75
LIG1-206ENST00000594067 CRYBG1Q9Y4K1 1723 aa19.75■□□□□ 0.75
LIG1-206ENST00000594067 UBE2HP62256 183 aa19.75■□□□□ 0.75
LIG1-206ENST00000594067 FAM227BQ96M60 508 aa19.75■□□□□ 0.75
LIG1-206ENST00000594067 ZSWIM6Q9HCJ5 1215 aa19.75■□□□□ 0.75
LIG1-206ENST00000594067 LMO7Q8WWI1 1683 aa19.75■□□□□ 0.75
LIG1-206ENST00000594067 SASH1O94885 1247 aa19.75■□□□□ 0.75
LIG1-206ENST00000594067 MPNDQ8N594 471 aa19.75■□□□□ 0.75
LIG1-206ENST00000594067 KAZALD1Q96I82 304 aa19.75■□□□□ 0.75
LIG1-206ENST00000594067 BICC1Q9H694 974 aaKnown RBP19.75■□□□□ 0.75
LIG1-206ENST00000594067 CCDC171Q6TFL3 1326 aa19.74■□□□□ 0.75
LIG1-206ENST00000594067 GRM8O00222 908 aa19.74■□□□□ 0.75
LIG1-206ENST00000594067 UVSSAQ2YD98 709 aa19.74■□□□□ 0.75
LIG1-206ENST00000594067 ARHGEF25Q86VW2 580 aa19.74■□□□□ 0.75
LIG1-206ENST00000594067 EAF2Q96CJ1 260 aaPredicted RBP19.74■□□□□ 0.75
LIG1-206ENST00000594067 RBM8AQ9Y5S9 174 aaKnown RBP19.74■□□□□ 0.75
LIG1-206ENST00000594067 KCNJ4P48050 445 aa19.74■□□□□ 0.75
LIG1-206ENST00000594067 NECTIN1Q15223 517 aa19.74■□□□□ 0.75
LIG1-206ENST00000594067 NECAB1Q8N987 351 aa19.74■□□□□ 0.75
LIG1-206ENST00000594067 FAM184AQ8NB25 1140 aa19.74■□□□□ 0.75
LIG1-206ENST00000594067 ORAI2Q96SN7 254 aa19.74■□□□□ 0.75
LIG1-206ENST00000594067 MTMR6Q9Y217 621 aa19.74■□□□□ 0.75
LIG1-206ENST00000594067 DNM1Q05193 864 aaKnown RBP19.73■□□□□ 0.75
LIG1-206ENST00000594067 ST3GAL1Q11201 340 aa19.73■□□□□ 0.75
LIG1-206ENST00000594067 G3BP1Q13283 466 aaKnown RBP eCLIP19.73■□□□□ 0.754e-6■■■■□ 21.1
LIG1-206ENST00000594067 NMIQ13287 307 aaPredicted RBP19.73■□□□□ 0.75
LIG1-206ENST00000594067 MTERF4Q7Z6M4 381 aaKnown RBP19.73■□□□□ 0.75
LIG1-206ENST00000594067 LINS1Q8NG48 757 aa19.73■□□□□ 0.75
LIG1-206ENST00000594067 SIL1Q9H173 461 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 246.5 ms