RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 TBC1D8O95759 1140 aa4.59□□□□□ -1.67
VRK3-204ENST00000593912 KDRP35968 1356 aa4.59□□□□□ -1.67
VRK3-204ENST00000593912 CSRNP1Q96S65 589 aa4.59□□□□□ -1.67
VRK3-204ENST00000593912 ANKRD26Q9UPS8 1709 aa4.59□□□□□ -1.67
VRK3-204ENST00000593912 ARFGEF2Q9Y6D5 1785 aa4.59□□□□□ -1.67
VRK3-204ENST00000593912 GJA3Q9Y6H8 435 aa4.59□□□□□ -1.67
VRK3-204ENST00000593912 COL4A5P29400 1685 aa4.58□□□□□ -1.68
VRK3-204ENST00000593912 SMG6Q86US8 1419 aaKnown RBP4.58□□□□□ -1.68
VRK3-204ENST00000593912 PCDH11XQ9BZA7 1347 aa4.58□□□□□ -1.68
VRK3-204ENST00000593912 PCDH11YQ9BZA8 1340 aa4.58□□□□□ -1.68
VRK3-204ENST00000593912 DSG3P32926 999 aa4.58□□□□□ -1.68
VRK3-204ENST00000593912 SCNN1DP51172 638 aa4.58□□□□□ -1.68
VRK3-204ENST00000593912 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.58□□□□□ -1.68
VRK3-204ENST00000593912 MTMR10Q9NXD2 777 aa4.58□□□□□ -1.68
VRK3-204ENST00000593912 CD163L1Q9NR16 1453 aa4.57□□□□□ -1.68
VRK3-204ENST00000593912 TTC21AQ8NDW8 1320 aa4.57□□□□□ -1.68
VRK3-204ENST00000593912 CNTNAP4Q9C0A0 1308 aa4.57□□□□□ -1.68
VRK3-204ENST00000593912 SERPINB2P05120 415 aa4.57□□□□□ -1.68
VRK3-204ENST00000593912 LMOD1P29536 600 aaPredicted RBP4.57□□□□□ -1.68
VRK3-204ENST00000593912 APLP2Q06481 763 aa4.57□□□□□ -1.68
VRK3-204ENST00000593912 MAP3K12Q12852 859 aa4.57□□□□□ -1.68
VRK3-204ENST00000593912 NFIXQ14938 502 aa4.57□□□□□ -1.68
VRK3-204ENST00000593912 USPL1Q5W0Q7 1092 aa4.57□□□□□ -1.68
VRK3-204ENST00000593912 RGMBQ6NW40 437 aa4.57□□□□□ -1.68
VRK3-204ENST00000593912 OLFM4Q6UX06 510 aa4.57□□□□□ -1.68
VRK3-204ENST00000593912 NME9Q86XW9 330 aa4.57□□□□□ -1.68
VRK3-204ENST00000593912 GPC2Q8N158 579 aa4.57□□□□□ -1.68
VRK3-204ENST00000593912 RBM42Q9BTD8 480 aaKnown RBP4.57□□□□□ -1.68
VRK3-204ENST00000593912 ATG3Q9NT62 314 aa4.57□□□□□ -1.68
VRK3-204ENST00000593912 KDM2AQ9Y2K7 1162 aa4.57□□□□□ -1.68
VRK3-204ENST00000593912 FZD9O00144 591 aa4.56□□□□□ -1.68
VRK3-204ENST00000593912 GPR25O00155 361 aa4.56□□□□□ -1.68
VRK3-204ENST00000593912 FBLN1P23142 703 aa4.56□□□□□ -1.68
VRK3-204ENST00000593912 ZNF157P51786 506 aaPredicted RBP4.56□□□□□ -1.68
VRK3-204ENST00000593912 RC3H1Q5TC82 1133 aaKnown RBP4.56□□□□□ -1.68
VRK3-204ENST00000593912 NBPF6Q5VWK0 638 aa4.56□□□□□ -1.68
VRK3-204ENST00000593912 INTS3Q68E01 1043 aaKnown RBP4.56□□□□□ -1.68
VRK3-204ENST00000593912 PRPF40BQ6NWY9 871 aaKnown RBP4.56□□□□□ -1.68
VRK3-204ENST00000593912 ALYREFQ86V81 257 aaKnown RBP4.56□□□□□ -1.68
VRK3-204ENST00000593912 IP6K1Q92551 441 aa4.56□□□□□ -1.68
VRK3-204ENST00000593912 NBPF4Q96M43 638 aa4.56□□□□□ -1.68
VRK3-204ENST00000593912 R3HDMLQ9H3Y0 253 aa4.56□□□□□ -1.68
VRK3-204ENST00000593912 TMOD3Q9NYL9 352 aa4.56□□□□□ -1.68
VRK3-204ENST00000593912 ZNF831Q5JPB2 1677 aa4.56□□□□□ -1.68
VRK3-204ENST00000593912 TJP1Q07157 1748 aa4.55□□□□□ -1.68
VRK3-204ENST00000593912 SYNGAP1Q96PV0 1343 aa4.55□□□□□ -1.68
VRK3-204ENST00000593912 POLR2AP24928 1970 aaKnown RBP4.55□□□□□ -1.68
VRK3-204ENST00000593912 WTIPA6NIX2 430 aaPredicted RBP4.55□□□□□ -1.68
VRK3-204ENST00000593912 MYCP01106 439 aaPredicted RBP4.55□□□□□ -1.68
VRK3-204ENST00000593912 SLC10A3P09131 477 aa4.55□□□□□ -1.68
VRK3-204ENST00000593912 TATP17735 454 aaPredicted RBP4.55□□□□□ -1.68
VRK3-204ENST00000593912 CRKLP46109 303 aaKnown RBP4.55□□□□□ -1.68
VRK3-204ENST00000593912 USP50Q70EL3 339 aaPredicted RBP4.55□□□□□ -1.68
VRK3-204ENST00000593912 RAPGEF4Q8WZA2 1011 aa4.55□□□□□ -1.68
VRK3-204ENST00000593912 DPF3Q92784 378 aa4.55□□□□□ -1.68
VRK3-204ENST00000593912 TRIM17Q9Y577 477 aa4.55□□□□□ -1.68
VRK3-204ENST00000593912 KTN1Q86UP2 1357 aaKnown RBP4.54□□□□□ -1.68
VRK3-204ENST00000593912 RPTORQ8N122 1335 aa4.54□□□□□ -1.68
VRK3-204ENST00000593912 TNFRSF10AO00220 468 aa4.54□□□□□ -1.68
VRK3-204ENST00000593912 FKTNO75072 461 aa4.54□□□□□ -1.68
VRK3-204ENST00000593912 HOXC9P31274 260 aa4.54□□□□□ -1.68
VRK3-204ENST00000593912 IARSP41252 1262 aaKnown RBP4.54□□□□□ -1.68
VRK3-204ENST00000593912 FKBP4Q02790 459 aaKnown RBP eCLIP4.54□□□□□ -1.68
VRK3-204ENST00000593912 ANKRD13DQ6ZTN6 518 aa4.54□□□□□ -1.68
VRK3-204ENST00000593912 OTOP1Q7RTM1 612 aa4.54□□□□□ -1.68
VRK3-204ENST00000593912 USP48Q86UV5 1035 aa4.54□□□□□ -1.68
VRK3-204ENST00000593912 RASAL3Q86YV0 1011 aa4.54□□□□□ -1.68
VRK3-204ENST00000593912 CCDC102AQ96A19 550 aa4.54□□□□□ -1.68
VRK3-204ENST00000593912 BCL2L12Q9HB09 334 aa4.54□□□□□ -1.68
VRK3-204ENST00000593912 GBA2Q9HCG7 927 aaPredicted RBP4.54□□□□□ -1.68
VRK3-204ENST00000593912 PIEZO1Q92508 2521 aa4.54□□□□□ -1.68
VRK3-204ENST00000593912 CGNL1Q0VF96 1302 aa4.53□□□□□ -1.68
VRK3-204ENST00000593912 MAP3K19Q56UN5 1328 aa4.53□□□□□ -1.68
VRK3-204ENST00000593912 ZPR1O75312 459 aa4.53□□□□□ -1.68
VRK3-204ENST00000593912 HIRAP54198 1017 aaPredicted RBP4.53□□□□□ -1.68
VRK3-204ENST00000593912 CCDC93Q567U6 631 aa4.53□□□□□ -1.68
VRK3-204ENST00000593912 TRPM4Q8TD43 1214 aa4.53□□□□□ -1.68
VRK3-204ENST00000593912 C7orf43Q8WVR3 580 aa4.53□□□□□ -1.68
VRK3-204ENST00000593912 FAM161BQ96MY7 647 aa4.53□□□□□ -1.68
VRK3-204ENST00000593912 GUCD1Q96NT3 240 aa4.53□□□□□ -1.68
VRK3-204ENST00000593912 TMEM106CQ9BVX2 250 aa4.53□□□□□ -1.68
VRK3-204ENST00000593912 ADARB2Q9NS39 739 aaKnown RBP4.53□□□□□ -1.68
VRK3-204ENST00000593912 STAP2Q9UGK3 403 aa4.53□□□□□ -1.68
VRK3-204ENST00000593912 A0A1W2PPC1 479 aa4.52□□□□□ -1.69
VRK3-204ENST00000593912 SHTN1A0MZ66 631 aa4.52□□□□□ -1.69
VRK3-204ENST00000593912 ZBTB7BO15156 539 aaPredicted RBP4.52□□□□□ -1.69
VRK3-204ENST00000593912 EIF6P56537 245 aaKnown RBP4.52□□□□□ -1.69
VRK3-204ENST00000593912 CAP1Q01518 475 aa4.52□□□□□ -1.69
VRK3-204ENST00000593912 SLC4A8Q2Y0W8 1093 aa4.52□□□□□ -1.69
VRK3-204ENST00000593912 SLC51AQ86UW1 340 aa4.52□□□□□ -1.69
VRK3-204ENST00000593912 CNKSR1Q969H4 720 aa4.52□□□□□ -1.69
VRK3-204ENST00000593912 ARMC5Q96C12 935 aa4.52□□□□□ -1.69
VRK3-204ENST00000593912 ZNF692Q9BU19 519 aaPredicted RBP4.52□□□□□ -1.69
VRK3-204ENST00000593912 GPRC5DQ9NZD1 345 aa4.52□□□□□ -1.69
VRK3-204ENST00000593912 CDH23Q9H251 3354 aa4.51□□□□□ -1.69
VRK3-204ENST00000593912 ADM5C9JUS6 153 aa4.51□□□□□ -1.69
VRK3-204ENST00000593912 PPEF1O14829 653 aaPredicted RBP4.51□□□□□ -1.69
VRK3-204ENST00000593912 PTCD1O75127 700 aaKnown RBP4.51□□□□□ -1.69
VRK3-204ENST00000593912 SRGNP10124 158 aa4.51□□□□□ -1.69
VRK3-204ENST00000593912 PDE6BP35913 854 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms