RNA–Protein interactions for RNA: ENST00000593093.5

CIRBP-242, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,528 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-242ENST00000593093 CAMSAP1Q5T5Y3 1602 aa16.91■□□□□ 0.3
CIRBP-242ENST00000593093 PTH1RQ03431 593 aa16.91■□□□□ 0.3
CIRBP-242ENST00000593093 CDC37L1Q7L3B6 337 aa16.91■□□□□ 0.3
CIRBP-242ENST00000593093 CBX8Q9HC52 389 aa16.91■□□□□ 0.3
CIRBP-242ENST00000593093 LMTK2Q8IWU2 1503 aa16.91■□□□□ 0.3
CIRBP-242ENST00000593093 PNPLA6Q8IY17 1366 aa16.91■□□□□ 0.3
CIRBP-242ENST00000593093 SIGLEC1Q9BZZ2 1709 aa16.91■□□□□ 0.3
CIRBP-242ENST00000593093 HDGFL1Q5TGJ6 251 aa16.91■□□□□ 0.3
CIRBP-242ENST00000593093 MTMR6Q9Y217 621 aa16.91■□□□□ 0.3
CIRBP-242ENST00000593093 IFIT2P09913 472 aaKnown RBP16.9■□□□□ 0.3
CIRBP-242ENST00000593093 SIL1Q9H173 461 aa16.9■□□□□ 0.3
CIRBP-242ENST00000593093 OSBPL3Q9H4L5 887 aa16.9■□□□□ 0.3
CIRBP-242ENST00000593093 NCBP1Q09161 790 aaKnown RBP16.9■□□□□ 0.3
CIRBP-242ENST00000593093 TPM3P06753 285 aa16.9■□□□□ 0.3
CIRBP-242ENST00000593093 CCDC61Q9Y6R9 512 aa16.9■□□□□ 0.3
CIRBP-242ENST00000593093 ADGRB2O60241 1585 aa16.89■□□□□ 0.3
CIRBP-242ENST00000593093 WASLO00401 505 aaPredicted RBP16.89■□□□□ 0.29
CIRBP-242ENST00000593093 SGSM2O43147 1006 aa16.89■□□□□ 0.29
CIRBP-242ENST00000593093 SPTLC3Q9NUV7 552 aa16.89■□□□□ 0.29
CIRBP-242ENST00000593093 COL3A1P02461 1466 aaPredicted RBP16.89■□□□□ 0.29
CIRBP-242ENST00000593093 PA2G4Q9UQ80 394 aaKnown RBP16.89■□□□□ 0.29
CIRBP-242ENST00000593093 ZRSR1Q15695 479 aaKnown RBP16.88■□□□□ 0.29
CIRBP-242ENST00000593093 ME3Q16798 604 aa16.88■□□□□ 0.29
CIRBP-242ENST00000593093 RGS12O14924 1447 aa16.88■□□□□ 0.29
CIRBP-242ENST00000593093 TAF7Q15545 349 aaPredicted RBP16.88■□□□□ 0.29
CIRBP-242ENST00000593093 CEP135Q66GS9 1140 aa16.88■□□□□ 0.29
CIRBP-242ENST00000593093 RPAP1Q9BWH6 1393 aaPredicted RBP16.88■□□□□ 0.29
CIRBP-242ENST00000593093 USHBP1Q8N6Y0 703 aa16.88■□□□□ 0.29
CIRBP-242ENST00000593093 LRRC2Q9BYS8 371 aa16.88■□□□□ 0.29
CIRBP-242ENST00000593093 USP16Q9Y5T5 823 aa16.88■□□□□ 0.29
CIRBP-242ENST00000593093 RUFY2Q8WXA3 655 aa16.87■□□□□ 0.29
CIRBP-242ENST00000593093 CCDC8Q9H0W5 538 aaPredicted RBP16.87■□□□□ 0.29
CIRBP-242ENST00000593093 GLI2P10070 1586 aa16.87■□□□□ 0.29
CIRBP-242ENST00000593093 CLASRPQ8N2M8 674 aaKnown RBP16.87■□□□□ 0.29
CIRBP-242ENST00000593093 C9orf78Q9NZ63 289 aaPredicted RBP16.87■□□□□ 0.29
CIRBP-242ENST00000593093 PTPN14Q15678 1187 aa16.87■□□□□ 0.29
CIRBP-242ENST00000593093 CACTINQ8WUQ7 758 aaKnown RBP16.87■□□□□ 0.29
CIRBP-242ENST00000593093 SECISBP2LQ93073 1101 aaKnown RBP16.87■□□□□ 0.29
CIRBP-242ENST00000593093 MRVI1Q9Y6F6 885 aa16.87■□□□□ 0.29
CIRBP-242ENST00000593093 RAD50Q92878 1312 aa16.86■□□□□ 0.29
CIRBP-242ENST00000593093 ADGRB1O14514 1584 aa16.86■□□□□ 0.29
CIRBP-242ENST00000593093 NBPF7P0C2Y1 421 aaPredicted RBP16.86■□□□□ 0.29
CIRBP-242ENST00000593093 IRX3P78415 501 aaPredicted RBP16.86■□□□□ 0.29
CIRBP-242ENST00000593093 GUCY1B3Q02153 619 aa16.86■□□□□ 0.29
CIRBP-242ENST00000593093 USP44Q9H0E7 712 aa16.86■□□□□ 0.29
CIRBP-242ENST00000593093 OGFRQ9NZT2 677 aa16.86■□□□□ 0.29
CIRBP-242ENST00000593093 ZSCAN25Q6NSZ9 544 aa16.86■□□□□ 0.29
CIRBP-242ENST00000593093 ZFYVE9O95405 1425 aa16.86■□□□□ 0.29
CIRBP-242ENST00000593093 METP08581 1390 aa16.86■□□□□ 0.29
CIRBP-242ENST00000593093 GTF2F1P35269 517 aaKnown RBP eCLIP16.86■□□□□ 0.292e-6■□□□□ 11.1
CIRBP-242ENST00000593093 BOLA2Q9H3K6 86 aa16.86■□□□□ 0.29
CIRBP-242ENST00000593093 ST7Q9NRC1 585 aa16.86■□□□□ 0.29
CIRBP-242ENST00000593093 ZNF215Q9UL58 517 aaPredicted RBP16.86■□□□□ 0.29
CIRBP-242ENST00000593093 LARP1Q6PKG0 1096 aaKnown RBP16.85■□□□□ 0.29
CIRBP-242ENST00000593093 AACSQ86V21 672 aa16.85■□□□□ 0.29
CIRBP-242ENST00000593093 FAM177A1Q8N128 213 aaPredicted RBP16.85■□□□□ 0.29
CIRBP-242ENST00000593093 NEXMIFQ5QGS0 1516 aa16.85■□□□□ 0.29
CIRBP-242ENST00000593093 NR1I2O75469 434 aa16.85■□□□□ 0.29
CIRBP-242ENST00000593093 KIF1BPQ96EK5 621 aa16.85■□□□□ 0.29
CIRBP-242ENST00000593093 HYPKQ9NX55 129 aa16.85■□□□□ 0.29
CIRBP-242ENST00000593093 SKILP12757 684 aa16.84■□□□□ 0.29
CIRBP-242ENST00000593093 AIMP1Q12904 312 aaKnown RBP16.84■□□□□ 0.29
CIRBP-242ENST00000593093 ELF2Q15723 593 aa16.84■□□□□ 0.29
CIRBP-242ENST00000593093 HOMER1Q86YM7 354 aa16.84■□□□□ 0.29
CIRBP-242ENST00000593093 FAM227BQ96M60 508 aa16.84■□□□□ 0.29
CIRBP-242ENST00000593093 FSD1Q9BTV5 496 aa16.84■□□□□ 0.29
CIRBP-242ENST00000593093 NRXN1Q9ULB1 1477 aa16.84■□□□□ 0.29
CIRBP-242ENST00000593093 NGDNQ8NEJ9 315 aaKnown RBP16.84■□□□□ 0.29
CIRBP-242ENST00000593093 LSG1Q9H089 658 aaKnown RBP16.84■□□□□ 0.29
CIRBP-242ENST00000593093 TPCN1Q9ULQ1 816 aa16.84■□□□□ 0.29
CIRBP-242ENST00000593093 SOS1Q07889 1333 aaPredicted RBP16.84■□□□□ 0.29
CIRBP-242ENST00000593093 USP27XA6NNY8 438 aa16.84■□□□□ 0.29
CIRBP-242ENST00000593093 HDGFP51858 240 aaKnown RBP16.84■□□□□ 0.29
CIRBP-242ENST00000593093 BLOC1S2Q6QNY1 142 aa16.84■□□□□ 0.29
CIRBP-242ENST00000593093 GTF3C6Q969F1 213 aa16.84■□□□□ 0.29
CIRBP-242ENST00000593093 RBM8AQ9Y5S9 174 aaKnown RBP16.84■□□□□ 0.29
CIRBP-242ENST00000593093 SMTNL1A8MU46 457 aa16.83■□□□□ 0.29
CIRBP-242ENST00000593093 ZNF75DP51815 510 aa16.83■□□□□ 0.29
CIRBP-242ENST00000593093 COL9A3Q14050 684 aaPredicted RBP16.83■□□□□ 0.29
CIRBP-242ENST00000593093 PI4KAP2A4QPH2 592 aa16.83■□□□□ 0.28
CIRBP-242ENST00000593093 POLR3GO15318 223 aaPredicted RBP16.83■□□□□ 0.28
CIRBP-242ENST00000593093 LTKP29376 864 aa16.83■□□□□ 0.28
CIRBP-242ENST00000593093 CCDC144BQ3MJ40 725 aa16.83■□□□□ 0.28
CIRBP-242ENST00000593093 CCDC144CPQ8IYA2 1237 aa16.83■□□□□ 0.28
CIRBP-242ENST00000593093 PI4KAP1Q8N8J0 262 aa16.83■□□□□ 0.28
CIRBP-242ENST00000593093 CHMP4CQ96CF2 233 aa16.83■□□□□ 0.28
CIRBP-242ENST00000593093 MYO5BQ9ULV0 1848 aa16.83■□□□□ 0.28
CIRBP-242ENST00000593093 PIK3C2BO00750 1634 aa16.83■□□□□ 0.28
CIRBP-242ENST00000593093 RICTORQ6R327 1708 aa16.83■□□□□ 0.28
CIRBP-242ENST00000593093 TMX1Q9H3N1 280 aa16.83■□□□□ 0.28
CIRBP-242ENST00000593093 PPLO60437 1756 aa16.83■□□□□ 0.28
CIRBP-242ENST00000593093 ISM2Q6H9L7 571 aa16.82■□□□□ 0.28
CIRBP-242ENST00000593093 ARHGEF40Q8TER5 1519 aa16.82■□□□□ 0.28
CIRBP-242ENST00000593093 JAK2O60674 1132 aa16.82■□□□□ 0.28
CIRBP-242ENST00000593093 MAP3K19Q56UN5 1328 aa16.82■□□□□ 0.28
CIRBP-242ENST00000593093 SMC2O95347 1197 aa16.82■□□□□ 0.28
CIRBP-242ENST00000593093 FEZ1Q99689 392 aa16.82■□□□□ 0.28
CIRBP-242ENST00000593093 EID1Q9Y6B2 187 aa16.82■□□□□ 0.28
CIRBP-242ENST00000593093 NDUFB9Q9Y6M9 179 aa16.82■□□□□ 0.28
CIRBP-242ENST00000593093 GPATCH3Q96I76 525 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms