RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 CCDC27Q2M243 656 aa23.8■■□□□ 1.4
DDX39A-212ENST00000590260 PRR5LQ6MZQ0 368 aa23.8■■□□□ 1.4
DDX39A-212ENST00000590260 CLEC4GQ6UXB4 293 aa23.8■■□□□ 1.4
DDX39A-212ENST00000590260 CCDC24Q8N4L8 307 aa23.8■■□□□ 1.4
DDX39A-212ENST00000590260 NECTIN2Q92692 538 aa23.8■■□□□ 1.4
DDX39A-212ENST00000590260 YY1P25490 414 aa23.79■■□□□ 1.4
DDX39A-212ENST00000590260 WWC1Q8IX03 1113 aa23.79■■□□□ 1.4
DDX39A-212ENST00000590260 NPM2Q86SE8 214 aaKnown RBP23.78■■□□□ 1.4
DDX39A-212ENST00000590260 RGL2O15211 777 aa23.77■■□□□ 1.4
DDX39A-212ENST00000590260 FAM9BQ8IZU0 186 aa23.77■■□□□ 1.4
DDX39A-212ENST00000590260 MAP3K15Q6ZN16 1313 aa23.77■■□□□ 1.4
DDX39A-212ENST00000590260 ARFGEF1Q9Y6D6 1849 aa23.77■■□□□ 1.4
DDX39A-212ENST00000590260 GNAI1P63096 354 aa23.76■■□□□ 1.39
DDX39A-212ENST00000590260 NCBP3Q53F19 620 aaKnown RBP23.76■■□□□ 1.39
DDX39A-212ENST00000590260 SETDB2Q96T68 719 aa23.76■■□□□ 1.39
DDX39A-212ENST00000590260 ERVV-1B6SEH8 477 aa23.75■■□□□ 1.39
DDX39A-212ENST00000590260 GRIN3BO60391 1043 aa23.75■■□□□ 1.39
DDX39A-212ENST00000590260 DUSP27Q5VZP5 1158 aa23.75■■□□□ 1.39
DDX39A-212ENST00000590260 C8orf58Q8NAV2 365 aa23.75■■□□□ 1.39
DDX39A-212ENST00000590260 HOXB7P09629 217 aa23.74■■□□□ 1.39
DDX39A-212ENST00000590260 ZBTB3Q9H5J0 574 aa23.74■■□□□ 1.39
DDX39A-212ENST00000590260 ATP10DQ9P241 1426 aa23.74■■□□□ 1.39
DDX39A-212ENST00000590260 CALD1Q05682 793 aaKnown RBP23.73■■□□□ 1.39
DDX39A-212ENST00000590260 TSR2Q969E8 191 aaKnown RBP23.73■■□□□ 1.39
DDX39A-212ENST00000590260 CHPF2Q9P2E5 772 aa23.73■■□□□ 1.39
DDX39A-212ENST00000590260 NIP7Q9Y221 180 aaKnown RBP eCLIP23.73■■□□□ 1.39
DDX39A-212ENST00000590260 BCS1LQ9Y276 419 aa23.73■■□□□ 1.39
DDX39A-212ENST00000590260 ZNF652Q9Y2D9 606 aa23.73■■□□□ 1.39
DDX39A-212ENST00000590260 UBN2Q6ZU65 1347 aa23.73■■□□□ 1.39
DDX39A-212ENST00000590260 HDGFL1Q5TGJ6 251 aa23.72■■□□□ 1.39
DDX39A-212ENST00000590260 DDX21Q9NR30 783 aaKnown RBP eCLIP23.72■■□□□ 1.39
DDX39A-212ENST00000590260 SALL2Q9Y467 1007 aaPredicted RBP23.72■■□□□ 1.39
DDX39A-212ENST00000590260 TNRC6CQ9HCJ0 1690 aaKnown RBP23.72■■□□□ 1.39
DDX39A-212ENST00000590260 TSPYL6Q8N831 410 aa23.71■■□□□ 1.39
DDX39A-212ENST00000590260 PIM2Q9P1W9 311 aa23.71■■□□□ 1.39
DDX39A-212ENST00000590260 ANKRD36CQ5JPF3 1778 aa23.7■■□□□ 1.39
DDX39A-212ENST00000590260 ELL2O00472 640 aaPredicted RBP23.7■■□□□ 1.38
DDX39A-212ENST00000590260 GIGYF2Q6Y7W6 1299 aaKnown RBP23.7■■□□□ 1.38
DDX39A-212ENST00000590260 KIF6Q6ZMV9 814 aa23.7■■□□□ 1.38
DDX39A-212ENST00000590260 COPS6Q7L5N1 327 aa23.7■■□□□ 1.38
DDX39A-212ENST00000590260 ZNF34Q8IZ26 560 aa23.7■■□□□ 1.38
DDX39A-212ENST00000590260 CNBD1Q8NA66 436 aa23.7■■□□□ 1.38
DDX39A-212ENST00000590260 XAGE3Q8WTP9 111 aa23.7■■□□□ 1.38
DDX39A-212ENST00000590260 BRIP1Q9BX63 1249 aa23.7■■□□□ 1.38
DDX39A-212ENST00000590260 C2CD5Q86YS7 1000 aa23.69■■□□□ 1.38
DDX39A-212ENST00000590260 SPINK5Q9NQ38 1064 aaPredicted RBP23.69■■□□□ 1.38
DDX39A-212ENST00000590260 IL16Q14005 1332 aa23.68■■□□□ 1.38
DDX39A-212ENST00000590260 FAM177BA6PVY3 158 aa23.68■■□□□ 1.38
DDX39A-212ENST00000590260 NBPF5PQ86XG9 351 aaPredicted RBP23.68■■□□□ 1.38
DDX39A-212ENST00000590260 ABCC12Q96J65 1359 aa23.67■■□□□ 1.38
DDX39A-212ENST00000590260 GPTP24298 496 aa23.67■■□□□ 1.38
DDX39A-212ENST00000590260 AIMP1Q12904 312 aaKnown RBP23.67■■□□□ 1.38
DDX39A-212ENST00000590260 DALRD3Q5D0E6 543 aaKnown RBP23.66■■□□□ 1.38
DDX39A-212ENST00000590260 SUSD4Q5VX71 490 aa23.66■■□□□ 1.38
DDX39A-212ENST00000590260 ADCY9O60503 1353 aa23.65■■□□□ 1.38
DDX39A-212ENST00000590260 DBF4Q9UBU7 674 aaPredicted RBP23.65■■□□□ 1.38
DDX39A-212ENST00000590260 CACNA1SQ13698 1873 aa23.64■■□□□ 1.38
DDX39A-212ENST00000590260 ZNF521Q96K83 1311 aa23.64■■□□□ 1.38
DDX39A-212ENST00000590260 FANCIQ9NVI1 1328 aa23.64■■□□□ 1.38
DDX39A-212ENST00000590260 KLRG2A4D1S0 409 aaPredicted RBP23.64■■□□□ 1.37
DDX39A-212ENST00000590260 H0YIN7 160 aa23.64■■□□□ 1.37
DDX39A-212ENST00000590260 NTSR2O95665 410 aa23.64■■□□□ 1.37
DDX39A-212ENST00000590260 PDE6BP35913 854 aa23.64■■□□□ 1.37
DDX39A-212ENST00000590260 ST5P78524 1137 aa23.64■■□□□ 1.37
DDX39A-212ENST00000590260 NUTM1Q86Y26 1132 aa23.64■■□□□ 1.37
DDX39A-212ENST00000590260 WDR63Q8IWG1 891 aa23.64■■□□□ 1.37
DDX39A-212ENST00000590260 ZNF784Q8NCA9 323 aaPredicted RBP23.64■■□□□ 1.37
DDX39A-212ENST00000590260 ARFGEF2Q9Y6D5 1785 aa23.64■■□□□ 1.37
DDX39A-212ENST00000590260 IBTKQ9P2D0 1353 aaPredicted RBP23.64■■□□□ 1.37
DDX39A-212ENST00000590260 SRGNP10124 158 aa23.63■■□□□ 1.37
DDX39A-212ENST00000590260 PHAXQ9H814 394 aaKnown RBP23.63■■□□□ 1.37
DDX39A-212ENST00000590260 SLX4Q8IY92 1834 aa23.63■■□□□ 1.37
DDX39A-212ENST00000590260 ERFEQ4G0M1 354 aa23.62■■□□□ 1.37
DDX39A-212ENST00000590260 TPTE2Q6XPS3 522 aa23.62■■□□□ 1.37
DDX39A-212ENST00000590260 CCER2I3L3R5 266 aa23.61■■□□□ 1.37
DDX39A-212ENST00000590260 ARHGAP27Q6ZUM4 889 aa23.61■■□□□ 1.37
DDX39A-212ENST00000590260 TTLL6Q8N841 843 aa23.61■■□□□ 1.37
DDX39A-212ENST00000590260 PRELPP51888 382 aa23.6■■□□□ 1.37
DDX39A-212ENST00000590260 HYPKQ9NX55 129 aa23.6■■□□□ 1.37
DDX39A-212ENST00000590260 SBF1O95248 1867 aa23.6■■□□□ 1.37
DDX39A-212ENST00000590260 RIC1Q4ADV7 1423 aa23.59■■□□□ 1.37
DDX39A-212ENST00000590260 TCIRG1Q13488 830 aa23.59■■□□□ 1.37
DDX39A-212ENST00000590260 PLBD2Q8NHP8 589 aa23.59■■□□□ 1.37
DDX39A-212ENST00000590260 ZNF622Q969S3 477 aaKnown RBP eCLIP23.59■■□□□ 1.376e-12■□□□□ 10.2
DDX39A-212ENST00000590260 TCERG1O14776 1098 aaKnown RBP23.58■■□□□ 1.37
DDX39A-212ENST00000590260 NPHP1O15259 732 aa23.58■■□□□ 1.37
DDX39A-212ENST00000590260 ANKRD13DQ6ZTN6 518 aa23.58■■□□□ 1.37
DDX39A-212ENST00000590260 C3orf67Q6ZVT6 689 aa23.58■■□□□ 1.37
DDX39A-212ENST00000590260 NLRP10Q86W26 655 aa23.58■■□□□ 1.37
DDX39A-212ENST00000590260 PDZRN3Q9UPQ7 1066 aa23.58■■□□□ 1.37
DDX39A-212ENST00000590260 LAMB2P55268 1798 aa23.57■■□□□ 1.36
DDX39A-212ENST00000590260 TWISTNBQ3B726 338 aaPredicted RBP23.57■■□□□ 1.36
DDX39A-212ENST00000590260 STYK1Q6J9G0 422 aa23.57■■□□□ 1.36
DDX39A-212ENST00000590260 SYNE4Q8N205 404 aa23.57■■□□□ 1.36
DDX39A-212ENST00000590260 NYXQ9GZU5 481 aa23.57■■□□□ 1.36
DDX39A-212ENST00000590260 FER1L6Q2WGJ9 1857 aa23.56■■□□□ 1.36
DDX39A-212ENST00000590260 EXOSC9Q06265 439 aaKnown RBP23.56■■□□□ 1.36
DDX39A-212ENST00000590260 CRY2Q49AN0 593 aa23.56■■□□□ 1.36
DDX39A-212ENST00000590260 PARP10Q53GL7 1025 aa23.56■■□□□ 1.36
DDX39A-212ENST00000590260 ZNF428Q96B54 188 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms