RNA–Protein interactions for RNA: ENST00000589445.1

R3HDM4-205, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 705 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-205ENST00000589445 TTLL7Q6ZT98 887 aa28.82■■■□□ 2.2
R3HDM4-205ENST00000589445 XAGE3Q8WTP9 111 aa28.82■■■□□ 2.2
R3HDM4-205ENST00000589445 HYPKQ9NX55 129 aa28.82■■■□□ 2.2
R3HDM4-205ENST00000589445 GYS1P13807 737 aa28.81■■■□□ 2.2
R3HDM4-205ENST00000589445 ZBTB3Q9H5J0 574 aa28.81■■■□□ 2.2
R3HDM4-205ENST00000589445 LRP10Q7Z4F1 713 aa28.8■■■□□ 2.2
R3HDM4-205ENST00000589445 ZNF784Q8NCA9 323 aaPredicted RBP28.8■■■□□ 2.2
R3HDM4-205ENST00000589445 CAMTA2O94983 1202 aa28.79■■■□□ 2.2
R3HDM4-205ENST00000589445 MAP3K15Q6ZN16 1313 aa28.78■■■□□ 2.2
R3HDM4-205ENST00000589445 COPS6Q7L5N1 327 aa28.78■■■□□ 2.2
R3HDM4-205ENST00000589445 FKBP8Q14318 412 aa28.77■■■□□ 2.2
R3HDM4-205ENST00000589445 PHAXQ9H814 394 aaKnown RBP28.77■■■□□ 2.2
R3HDM4-205ENST00000589445 ZNF652Q9Y2D9 606 aa28.77■■■□□ 2.2
R3HDM4-205ENST00000589445 SLC4A2P04920 1241 aa28.76■■■□□ 2.19
R3HDM4-205ENST00000589445 BCL2L13Q9BXK5 485 aa28.76■■■□□ 2.19
R3HDM4-205ENST00000589445 AFDNP55196 1824 aaKnown RBP28.76■■■□□ 2.19
R3HDM4-205ENST00000589445 POLD1P28340 1107 aa28.75■■■□□ 2.19
R3HDM4-205ENST00000589445 BCL2L12Q9HB09 334 aa28.75■■■□□ 2.19
R3HDM4-205ENST00000589445 CT47B1P0C2W7 299 aaPredicted RBP28.74■■■□□ 2.19
R3HDM4-205ENST00000589445 BICDL1Q6ZP65 573 aa28.74■■■□□ 2.19
R3HDM4-205ENST00000589445 NLGN1Q8N2Q7 840 aa28.74■■■□□ 2.19
R3HDM4-205ENST00000589445 SMC4Q9NTJ3 1288 aa28.74■■■□□ 2.19
R3HDM4-205ENST00000589445 MMP10P09238 476 aa28.72■■■□□ 2.19
R3HDM4-205ENST00000589445 HLFQ16534 295 aa28.72■■■□□ 2.19
R3HDM4-205ENST00000589445 G2E3Q7L622 706 aa28.72■■■□□ 2.19
R3HDM4-205ENST00000589445 DDX58O95786 925 aaKnown RBP28.71■■■□□ 2.19
R3HDM4-205ENST00000589445 ZNF428Q96B54 188 aa28.71■■■□□ 2.19
R3HDM4-205ENST00000589445 ATP10DQ9P241 1426 aa28.7■■■□□ 2.19
R3HDM4-205ENST00000589445 ERVV-1B6SEH8 477 aa28.7■■■□□ 2.18
R3HDM4-205ENST00000589445 FLIIQ13045 1269 aa28.7■■■□□ 2.18
R3HDM4-205ENST00000589445 TBC1D9BQ66K14 1250 aa28.7■■■□□ 2.18
R3HDM4-205ENST00000589445 SSH1Q8WYL5 1049 aa28.7■■■□□ 2.18
R3HDM4-205ENST00000589445 FKBP5Q13451 457 aaPredicted RBP28.69■■■□□ 2.18
R3HDM4-205ENST00000589445 RIC3Q7Z5B4 369 aa28.69■■■□□ 2.18
R3HDM4-205ENST00000589445 NRXN2Q9P2S2 1712 aa28.69■■■□□ 2.18
R3HDM4-205ENST00000589445 CARMIL3Q8ND23 1372 aa28.68■■■□□ 2.18
R3HDM4-205ENST00000589445 PTGER2P43116 358 aa28.68■■■□□ 2.18
R3HDM4-205ENST00000589445 NFIXQ14938 502 aa28.68■■■□□ 2.18
R3HDM4-205ENST00000589445 ALDH1L2Q3SY69 923 aa28.68■■■□□ 2.18
R3HDM4-205ENST00000589445 PLBD2Q8NHP8 589 aa28.68■■■□□ 2.18
R3HDM4-205ENST00000589445 GPTP24298 496 aa28.67■■■□□ 2.18
R3HDM4-205ENST00000589445 DDR1Q08345 913 aa28.67■■■□□ 2.18
R3HDM4-205ENST00000589445 IFFO2Q5TF58 517 aa28.67■■■□□ 2.18
R3HDM4-205ENST00000589445 ANKRD13DQ6ZTN6 518 aa28.67■■■□□ 2.18
R3HDM4-205ENST00000589445 NIP7Q9Y221 180 aaKnown RBP eCLIP28.67■■■□□ 2.18
R3HDM4-205ENST00000589445 PARP3Q9Y6F1 533 aa28.67■■■□□ 2.18
R3HDM4-205ENST00000589445 CLEC4GQ6UXB4 293 aa28.66■■■□□ 2.18
R3HDM4-205ENST00000589445 GIGYF2Q6Y7W6 1299 aaKnown RBP28.66■■■□□ 2.18
R3HDM4-205ENST00000589445 KLHL34Q8N239 644 aa28.66■■■□□ 2.18
R3HDM4-205ENST00000589445 MRPL50Q8N5N7 158 aaKnown RBP28.66■■■□□ 2.18
R3HDM4-205ENST00000589445 ADCY9O60503 1353 aa28.65■■■□□ 2.18
R3HDM4-205ENST00000589445 C1QTNF8P60827 252 aa28.65■■■□□ 2.18
R3HDM4-205ENST00000589445 SETDB2Q96T68 719 aa28.65■■■□□ 2.18
R3HDM4-205ENST00000589445 SGIP1Q9BQI5 828 aa28.65■■■□□ 2.18
R3HDM4-205ENST00000589445 CHD4Q14839 1912 aa28.65■■■□□ 2.18
R3HDM4-205ENST00000589445 RGL2O15211 777 aa28.64■■■□□ 2.18
R3HDM4-205ENST00000589445 RARSP54136 660 aaKnown RBP28.64■■■□□ 2.18
R3HDM4-205ENST00000589445 MAP3K2Q9Y2U5 619 aa28.64■■■□□ 2.18
R3HDM4-205ENST00000589445 N4BP2Q86UW6 1770 aaPredicted RBP28.64■■■□□ 2.18
R3HDM4-205ENST00000589445 FAM177BA6PVY3 158 aa28.63■■■□□ 2.17
R3HDM4-205ENST00000589445 POLRMTO00411 1230 aaKnown RBP28.63■■■□□ 2.17
R3HDM4-205ENST00000589445 NPHP1O15259 732 aa28.63■■■□□ 2.17
R3HDM4-205ENST00000589445 HSP90AB3PQ58FF7 597 aa28.63■■■□□ 2.17
R3HDM4-205ENST00000589445 KIF13BQ9NQT8 1826 aa28.62■■■□□ 2.17
R3HDM4-205ENST00000589445 PI4KAP2A4QPH2 592 aa28.62■■■□□ 2.17
R3HDM4-205ENST00000589445 PI4KAP1Q8N8J0 262 aa28.62■■■□□ 2.17
R3HDM4-205ENST00000589445 TM4SF1P30408 202 aa28.61■■■□□ 2.17
R3HDM4-205ENST00000589445 KSR2Q6VAB6 950 aa28.61■■■□□ 2.17
R3HDM4-205ENST00000589445 MYD88Q99836 296 aa28.61■■■□□ 2.17
R3HDM4-205ENST00000589445 UBN2Q6ZU65 1347 aa28.61■■■□□ 2.17
R3HDM4-205ENST00000589445 ANKRD31Q8N7Z5 1873 aa28.6■■■□□ 2.17
R3HDM4-205ENST00000589445 KIF16BQ96L93 1317 aa28.6■■■□□ 2.17
R3HDM4-205ENST00000589445 ATP5J2-PTCD1G3V325 749 aa28.59■■■□□ 2.17
R3HDM4-205ENST00000589445 NBPF5PQ86XG9 351 aaPredicted RBP28.59■■■□□ 2.17
R3HDM4-205ENST00000589445 C10orf71Q711Q0 1435 aa28.59■■■□□ 2.17
R3HDM4-205ENST00000589445 LAMB2P55268 1798 aa28.58■■■□□ 2.17
R3HDM4-205ENST00000589445 F6X3S4 739 aa28.58■■■□□ 2.17
R3HDM4-205ENST00000589445 SERPINB2P05120 415 aa28.58■■■□□ 2.17
R3HDM4-205ENST00000589445 TCIRG1Q13488 830 aa28.58■■■□□ 2.17
R3HDM4-205ENST00000589445 CNBD1Q8NA66 436 aa28.58■■■□□ 2.17
R3HDM4-205ENST00000589445 PTPRCP08575 1304 aa28.58■■■□□ 2.17
R3HDM4-205ENST00000589445 TNRC6CQ9HCJ0 1690 aaKnown RBP28.58■■■□□ 2.16
R3HDM4-205ENST00000589445 BCAR3O75815 825 aa28.57■■■□□ 2.16
R3HDM4-205ENST00000589445 NEXNQ0ZGT2 675 aa28.57■■■□□ 2.16
R3HDM4-205ENST00000589445 DNAAF4Q8WXU2 420 aa28.57■■■□□ 2.16
R3HDM4-205ENST00000589445 UTRNP46939 3433 aa28.57■■■□□ 2.16
R3HDM4-205ENST00000589445 COL11A2P13942 1736 aaPredicted RBP28.56■■■□□ 2.16
R3HDM4-205ENST00000589445 ZNF34Q8IZ26 560 aa28.56■■■□□ 2.16
R3HDM4-205ENST00000589445 METTL22Q9BUU2 404 aaPredicted RBP28.56■■■□□ 2.16
R3HDM4-205ENST00000589445 FHDC1Q9C0D6 1143 aaPredicted RBP28.56■■■□□ 2.16
R3HDM4-205ENST00000589445 PXDNLA1KZ92 1463 aa28.55■■■□□ 2.16
R3HDM4-205ENST00000589445 PARP10Q53GL7 1025 aa28.55■■■□□ 2.16
R3HDM4-205ENST00000589445 SLC4A10Q6U841 1118 aa28.55■■■□□ 2.16
R3HDM4-205ENST00000589445 FRAT1Q92837 279 aaPredicted RBP28.55■■■□□ 2.16
R3HDM4-205ENST00000589445 SYT17Q9BSW7 474 aa28.55■■■□□ 2.16
R3HDM4-205ENST00000589445 KIAA1551Q9HCM1 1747 aa28.55■■■□□ 2.16
R3HDM4-205ENST00000589445 IBTKQ9P2D0 1353 aaPredicted RBP28.54■■■□□ 2.16
R3HDM4-205ENST00000589445 CCDC24Q8N4L8 307 aa28.54■■■□□ 2.16
R3HDM4-205ENST00000589445 NOB1Q9ULX3 412 aaKnown RBP28.54■■■□□ 2.16
R3HDM4-205ENST00000589445 DDX60Q8IY21 1712 aaKnown RBP28.53■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms