RNA–Protein interactions for RNA: ENST00000588815.5

CAPNS1-206, Transcript of calpain small subunit 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CAPNS1, Length 1,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-206ENST00000588815 KDM2BQ8NHM5 1336 aa39.04■■■■□ 3.84
CAPNS1-206ENST00000588815 RWDD1Q9H446 243 aaPredicted RBP39.03■■■■□ 3.84
CAPNS1-206ENST00000588815 MEIS3Q99687 375 aa39.02■■■■□ 3.84
CAPNS1-206ENST00000588815 ZBTB1Q9Y2K1 713 aa39.02■■■■□ 3.84
CAPNS1-206ENST00000588815 ANKRD36CQ5JPF3 1778 aa39.01■■■■□ 3.84
CAPNS1-206ENST00000588815 CRKLP46109 303 aaKnown RBP39■■■■□ 3.83
CAPNS1-206ENST00000588815 HDAC1Q13547 482 aaPredicted RBP39■■■■□ 3.83
CAPNS1-206ENST00000588815 NPM2Q86SE8 214 aaKnown RBP39■■■■□ 3.83
CAPNS1-206ENST00000588815 NUP98P52948 1817 aa39■■■■□ 3.83
CAPNS1-206ENST00000588815 HMGB2P26583 209 aaKnown RBP38.99■■■■□ 3.83
CAPNS1-206ENST00000588815 KIF6Q6ZMV9 814 aa38.98■■■■□ 3.83
CAPNS1-206ENST00000588815 HDAC5Q9UQL6 1122 aa38.98■■■■□ 3.83
CAPNS1-206ENST00000588815 CNTNAP4Q9C0A0 1308 aa38.98■■■■□ 3.83
CAPNS1-206ENST00000588815 INTS5Q6P9B9 1019 aaKnown RBP38.98■■■■□ 3.83
CAPNS1-206ENST00000588815 TTLL7Q6ZT98 887 aa38.98■■■■□ 3.83
CAPNS1-206ENST00000588815 USP44Q9H0E7 712 aa38.98■■■■□ 3.83
CAPNS1-206ENST00000588815 RC3H1Q5TC82 1133 aaKnown RBP38.96■■■■□ 3.83
CAPNS1-206ENST00000588815 GNAI2P04899 355 aa38.95■■■■□ 3.83
CAPNS1-206ENST00000588815 EIF5P55010 431 aaKnown RBP38.95■■■■□ 3.83
CAPNS1-206ENST00000588815 RPAP2Q8IXW5 612 aaPredicted RBP38.95■■■■□ 3.83
CAPNS1-206ENST00000588815 CCNL1Q9UK58 526 aaPredicted RBP38.95■■■■□ 3.83
CAPNS1-206ENST00000588815 TRIM37O94972 964 aa38.93■■■■□ 3.82
CAPNS1-206ENST00000588815 UBTFL1P0CB47 393 aaPredicted RBP38.93■■■■□ 3.82
CAPNS1-206ENST00000588815 MYD88Q99836 296 aa38.93■■■■□ 3.82
CAPNS1-206ENST00000588815 RGPD3A6NKT7 1758 aaPredicted RBP38.93■■■■□ 3.82
CAPNS1-206ENST00000588815 RGPD4Q7Z3J3 1758 aa38.93■■■■□ 3.82
CAPNS1-206ENST00000588815 MAP3K15Q6ZN16 1313 aa38.93■■■■□ 3.82
CAPNS1-206ENST00000588815 IGHDP01880 384 aa38.92■■■■□ 3.82
CAPNS1-206ENST00000588815 NEURL1BA8MQ27 555 aa38.92■■■■□ 3.82
CAPNS1-206ENST00000588815 IGKV5-2P06315 115 aa38.92■■■■□ 3.82
CAPNS1-206ENST00000588815 LINC00116Q8NCU8 138 aa38.92■■■■□ 3.82
CAPNS1-206ENST00000588815 ZNF330Q9Y3S2 320 aaPredicted RBP38.92■■■■□ 3.82
CAPNS1-206ENST00000588815 C4BP0C0L5 1744 aa38.91■■■■□ 3.82
CAPNS1-206ENST00000588815 TNS1Q9HBL0 1735 aaKnown RBP38.91■■■■□ 3.82
CAPNS1-206ENST00000588815 PELP1Q8IZL8 1130 aaKnown RBP38.91■■■■□ 3.82
CAPNS1-206ENST00000588815 UTYO14607 1347 aa38.9■■■■□ 3.82
CAPNS1-206ENST00000588815 BCORQ6W2J9 1755 aa38.9■■■■□ 3.82
CAPNS1-206ENST00000588815 ERVV-1B6SEH8 477 aa38.9■■■■□ 3.82
CAPNS1-206ENST00000588815 SLC27A3Q5K4L6 730 aa38.9■■■■□ 3.82
CAPNS1-206ENST00000588815 C1orf115Q9H7X2 142 aa38.9■■■■□ 3.82
CAPNS1-206ENST00000588815 C9orf78Q9NZ63 289 aaPredicted RBP38.9■■■■□ 3.82
CAPNS1-206ENST00000588815 CWF19L2Q2TBE0 894 aaKnown RBP38.89■■■■□ 3.82
CAPNS1-206ENST00000588815 ANKRD44Q8N8A2 993 aa38.89■■■■□ 3.82
CAPNS1-206ENST00000588815 HSP90AB3PQ58FF7 597 aa38.88■■■■□ 3.81
CAPNS1-206ENST00000588815 ZBTB3Q9H5J0 574 aa38.88■■■■□ 3.81
CAPNS1-206ENST00000588815 GRM8O00222 908 aa38.86■■■■□ 3.81
CAPNS1-206ENST00000588815 GCKRQ14397 625 aa38.86■■■■□ 3.81
CAPNS1-206ENST00000588815 GIGYF2Q6Y7W6 1299 aaKnown RBP38.86■■■■□ 3.81
CAPNS1-206ENST00000588815 A0A087WZG4 1122 aa38.86■■■■□ 3.81
CAPNS1-206ENST00000588815 CEP85Q6P2H3 762 aa38.86■■■■□ 3.81
CAPNS1-206ENST00000588815 DZIP3Q86Y13 1208 aaKnown RBP38.86■■■■□ 3.81
CAPNS1-206ENST00000588815 TRIM28Q13263 835 aaKnown RBP38.85■■■■□ 3.81
CAPNS1-206ENST00000588815 TCIRG1Q13488 830 aa38.85■■■■□ 3.81
CAPNS1-206ENST00000588815 COL15A1P39059 1388 aa38.84■■■■□ 3.81
CAPNS1-206ENST00000588815 PLSCR1O15162 318 aa38.84■■■■□ 3.81
CAPNS1-206ENST00000588815 CCDC191Q8NCU4 936 aa38.84■■■■□ 3.81
CAPNS1-206ENST00000588815 HMMRO75330 724 aa38.83■■■■□ 3.81
CAPNS1-206ENST00000588815 NBPF7P0C2Y1 421 aaPredicted RBP38.83■■■■□ 3.81
CAPNS1-206ENST00000588815 RGL2O15211 777 aa38.82■■■■□ 3.81
CAPNS1-206ENST00000588815 SIRT2Q8IXJ6 389 aa38.81■■■■□ 3.8
CAPNS1-206ENST00000588815 ISCA1Q9BUE6 129 aa38.81■■■■□ 3.8
CAPNS1-206ENST00000588815 LRRFIP2Q9Y608 721 aaKnown RBP38.81■■■■□ 3.8
CAPNS1-206ENST00000588815 EP400Q96L91 3159 aa38.81■■■■□ 3.8
CAPNS1-206ENST00000588815 RPS6KA4O75676 772 aa38.8■■■■□ 3.8
CAPNS1-206ENST00000588815 CWC25Q9NXE8 425 aaPredicted RBP38.8■■■■□ 3.8
CAPNS1-206ENST00000588815 SCN7AQ01118 1682 aa38.79■■■■□ 3.8
CAPNS1-206ENST00000588815 UBR3Q6ZT12 1888 aa38.79■■■■□ 3.8
CAPNS1-206ENST00000588815 SMC5Q8IY18 1101 aa38.79■■■■□ 3.8
CAPNS1-206ENST00000588815 GCC1Q96CN9 775 aa38.79■■■■□ 3.8
CAPNS1-206ENST00000588815 ARXQ96QS3 562 aa38.79■■■■□ 3.8
CAPNS1-206ENST00000588815 KCNQ4P56696 695 aa38.78■■■■□ 3.8
CAPNS1-206ENST00000588815 ATP5J2-PTCD1G3V325 749 aa38.77■■■■□ 3.8
CAPNS1-206ENST00000588815 ATP8B2P98198 1209 aa38.77■■■■□ 3.8
CAPNS1-206ENST00000588815 TBC1D2BQ9UPU7 963 aa38.76■■■■□ 3.8
CAPNS1-206ENST00000588815 C4AP0C0L4 1744 aa38.74■■■■□ 3.79
CAPNS1-206ENST00000588815 ILDR1Q86SU0 546 aaPredicted RBP38.74■■■■□ 3.79
CAPNS1-206ENST00000588815 RTCBQ9Y3I0 505 aaKnown RBP38.74■■■■□ 3.79
CAPNS1-206ENST00000588815 LRRC4BQ9NT99 713 aa38.73■■■■□ 3.79
CAPNS1-206ENST00000588815 CAMTA2O94983 1202 aa38.73■■■■□ 3.79
CAPNS1-206ENST00000588815 APBA3O96018 575 aa38.73■■■■□ 3.79
CAPNS1-206ENST00000588815 MTX1Q13505 466 aa38.73■■■■□ 3.79
CAPNS1-206ENST00000588815 HLFQ16534 295 aa38.73■■■■□ 3.79
CAPNS1-206ENST00000588815 ZNF652Q9Y2D9 606 aa38.73■■■■□ 3.79
CAPNS1-206ENST00000588815 TXNRD1Q16881 649 aa38.72■■■■□ 3.79
CAPNS1-206ENST00000588815 CLEC4GQ6UXB4 293 aa38.72■■■■□ 3.79
CAPNS1-206ENST00000588815 DCTPP1Q9H773 170 aa38.72■■■■□ 3.79
CAPNS1-206ENST00000588815 H7C1W4 665 aa38.71■■■■□ 3.79
CAPNS1-206ENST00000588815 GNPATO15228 680 aa38.71■■■■□ 3.79
CAPNS1-206ENST00000588815 AK7Q96M32 723 aa38.7■■■■□ 3.79
CAPNS1-206ENST00000588815 MYH3P11055 1940 aa38.7■■■■□ 3.79
CAPNS1-206ENST00000588815 ADRA2BP18089 450 aa38.68■■■■□ 3.78
CAPNS1-206ENST00000588815 SSH3Q8TE77 659 aa38.68■■■■□ 3.78
CAPNS1-206ENST00000588815 CASP7P55210 303 aa38.67■■■■□ 3.78
CAPNS1-206ENST00000588815 UBE3BQ7Z3V4 1068 aa38.67■■■■□ 3.78
CAPNS1-206ENST00000588815 ZNF34Q8IZ26 560 aa38.67■■■■□ 3.78
CAPNS1-206ENST00000588815 SUCLG2Q96I99 432 aa38.67■■■■□ 3.78
CAPNS1-206ENST00000588815 NARFQ9UHQ1 456 aa38.66■■■■□ 3.78
CAPNS1-206ENST00000588815 PCCAP05165 728 aaPredicted RBP38.65■■■■□ 3.78
CAPNS1-206ENST00000588815 POLA2Q14181 598 aa38.65■■■■□ 3.78
CAPNS1-206ENST00000588815 NLRP10Q86W26 655 aa38.65■■■■□ 3.78
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms