RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-223ENST00000588516 HDGFL1Q5TGJ6 251 aa17.1■□□□□ 0.33
NEDD4L-223ENST00000588516 PTF1AQ7RTS3 328 aa17.1■□□□□ 0.33
NEDD4L-223ENST00000588516 PROM2Q8N271 834 aa17.1■□□□□ 0.33
NEDD4L-223ENST00000588516 IL17RAQ96F46 866 aa17.1■□□□□ 0.33
NEDD4L-223ENST00000588516 ARXQ96QS3 562 aa17.1■□□□□ 0.33
NEDD4L-223ENST00000588516 BAG4O95429 457 aaKnown RBP17.09■□□□□ 0.33
NEDD4L-223ENST00000588516 SLC15A2Q16348 729 aa17.09■□□□□ 0.33
NEDD4L-223ENST00000588516 DDB1Q16531 1140 aa17.09■□□□□ 0.33
NEDD4L-223ENST00000588516 RTN4Q9NQC3 1192 aaKnown RBP17.09■□□□□ 0.33
NEDD4L-223ENST00000588516 CEMIPQ8WUJ3 1361 aa17.09■□□□□ 0.33
NEDD4L-223ENST00000588516 SALL3Q9BXA9 1300 aa17.08■□□□□ 0.33
NEDD4L-223ENST00000588516 F6X3S4 739 aa17.08■□□□□ 0.32
NEDD4L-223ENST00000588516 APBB1O00213 710 aa17.08■□□□□ 0.32
NEDD4L-223ENST00000588516 TXNRD1Q16881 649 aa17.08■□□□□ 0.32
NEDD4L-223ENST00000588516 IL17REQ8NFR9 667 aa17.08■□□□□ 0.32
NEDD4L-223ENST00000588516 SSH3Q8TE77 659 aa17.08■□□□□ 0.32
NEDD4L-223ENST00000588516 INTS4Q96HW7 963 aaKnown RBP17.08■□□□□ 0.32
NEDD4L-223ENST00000588516 ESYT1Q9BSJ8 1104 aa17.08■□□□□ 0.32
NEDD4L-223ENST00000588516 RBM42Q9BTD8 480 aaKnown RBP17.08■□□□□ 0.32
NEDD4L-223ENST00000588516 LTN1O94822 1766 aa17.08■□□□□ 0.32
NEDD4L-223ENST00000588516 ZBTB7CA1YPR0 619 aa17.07■□□□□ 0.32
NEDD4L-223ENST00000588516 AKAP4Q5JQC9 854 aa17.07■□□□□ 0.32
NEDD4L-223ENST00000588516 DDX49Q9Y6V7 483 aaKnown RBP17.07■□□□□ 0.32
NEDD4L-223ENST00000588516 RGPD3A6NKT7 1758 aaPredicted RBP17.07■□□□□ 0.32
NEDD4L-223ENST00000588516 RGPD4Q7Z3J3 1758 aa17.07■□□□□ 0.32
NEDD4L-223ENST00000588516 CD2BP2O95400 341 aaKnown RBP17.06■□□□□ 0.32
NEDD4L-223ENST00000588516 KLHL34Q8N239 644 aa17.06■□□□□ 0.32
NEDD4L-223ENST00000588516 OTUD7AQ8TE49 926 aaPredicted RBP17.06■□□□□ 0.32
NEDD4L-223ENST00000588516 TRIM44Q96DX7 344 aaPredicted RBP17.06■□□□□ 0.32
NEDD4L-223ENST00000588516 SGIP1Q9BQI5 828 aa17.06■□□□□ 0.32
NEDD4L-223ENST00000588516 PARP4Q9UKK3 1724 aaKnown RBP17.06■□□□□ 0.32
NEDD4L-223ENST00000588516 LMO7Q8WWI1 1683 aa17.05■□□□□ 0.32
NEDD4L-223ENST00000588516 TRIM6-TRIM34B2RNG4 842 aa17.05■□□□□ 0.32
NEDD4L-223ENST00000588516 CYP2E1P05181 493 aaPredicted RBP17.05■□□□□ 0.32
NEDD4L-223ENST00000588516 SSFA2P28290 1259 aa17.05■□□□□ 0.32
NEDD4L-223ENST00000588516 TEFQ10587 303 aa17.05■□□□□ 0.32
NEDD4L-223ENST00000588516 KIF1BPQ96EK5 621 aa17.05■□□□□ 0.32
NEDD4L-223ENST00000588516 EXOC6BQ9Y2D4 811 aa17.05■□□□□ 0.32
NEDD4L-223ENST00000588516 TUBGCP6Q96RT7 1819 aa17.05■□□□□ 0.32
NEDD4L-223ENST00000588516 ALDH1L1O75891 902 aa17.04■□□□□ 0.32
NEDD4L-223ENST00000588516 CHMLP26374 656 aa17.04■□□□□ 0.32
NEDD4L-223ENST00000588516 POLA2Q14181 598 aa17.04■□□□□ 0.32
NEDD4L-223ENST00000588516 ERC1Q8IUD2 1116 aa17.04■□□□□ 0.32
NEDD4L-223ENST00000588516 USP44Q9H0E7 712 aa17.04■□□□□ 0.32
NEDD4L-223ENST00000588516 LRRFIP2Q9Y608 721 aaKnown RBP17.04■□□□□ 0.32
NEDD4L-223ENST00000588516 KDM3BQ7LBC6 1761 aa17.04■□□□□ 0.32
NEDD4L-223ENST00000588516 MBD3O95983 291 aa17.03■□□□□ 0.32
NEDD4L-223ENST00000588516 EIF4A1P60842 406 aaKnown RBP17.03■□□□□ 0.32
NEDD4L-223ENST00000588516 CCDC173Q0VFZ6 552 aa17.03■□□□□ 0.32
NEDD4L-223ENST00000588516 GPATCH3Q96I76 525 aa17.03■□□□□ 0.32
NEDD4L-223ENST00000588516 FOXD4L1Q9NU39 408 aa17.03■□□□□ 0.32
NEDD4L-223ENST00000588516 NFAT5O94916 1531 aa17.03■□□□□ 0.32
NEDD4L-223ENST00000588516 CPDO75976 1380 aa17.02■□□□□ 0.32
NEDD4L-223ENST00000588516 NEK4P51957 841 aa17.02■□□□□ 0.32
NEDD4L-223ENST00000588516 ZNF445P59923 1031 aa17.02■□□□□ 0.32
NEDD4L-223ENST00000588516 C1orf141Q5JVX7 400 aa17.02■□□□□ 0.32
NEDD4L-223ENST00000588516 TOM1L2Q6ZVM7 507 aa17.02■□□□□ 0.32
NEDD4L-223ENST00000588516 CNTROBQ8N137 903 aa17.02■□□□□ 0.32
NEDD4L-223ENST00000588516 RUFY2Q8WXA3 655 aa17.02■□□□□ 0.32
NEDD4L-223ENST00000588516 DNAAF4Q8WXU2 420 aa17.02■□□□□ 0.32
NEDD4L-223ENST00000588516 LTV1Q96GA3 475 aaPredicted RBP17.02■□□□□ 0.32
NEDD4L-223ENST00000588516 DBF4Q9UBU7 674 aaPredicted RBP17.02■□□□□ 0.32
NEDD4L-223ENST00000588516 SBF2Q86WG5 1849 aa17.02■□□□□ 0.32
NEDD4L-223ENST00000588516 TTC41PQ6P2S7 1318 aa17.02■□□□□ 0.32
NEDD4L-223ENST00000588516 PLEKHG2Q9H7P9 1386 aa17.02■□□□□ 0.31
NEDD4L-223ENST00000588516 PDIA4P13667 645 aaKnown RBP17.01■□□□□ 0.31
NEDD4L-223ENST00000588516 CUL4AQ13619 759 aa17.01■□□□□ 0.31
NEDD4L-223ENST00000588516 MARCH10Q8NA82 808 aaPredicted RBP17.01■□□□□ 0.31
NEDD4L-223ENST00000588516 RILPL2Q969X0 211 aa17.01■□□□□ 0.31
NEDD4L-223ENST00000588516 COL5A2P05997 1499 aaPredicted RBP17.01■□□□□ 0.31
NEDD4L-223ENST00000588516 SURF6O75683 361 aaKnown RBP17■□□□□ 0.31
NEDD4L-223ENST00000588516 GCP02774 474 aa17■□□□□ 0.31
NEDD4L-223ENST00000588516 CLCN1P35523 988 aa17■□□□□ 0.31
NEDD4L-223ENST00000588516 KIAA1211Q6ZU35 1233 aa17■□□□□ 0.31
NEDD4L-223ENST00000588516 SYAP1Q96A49 352 aaPredicted RBP17■□□□□ 0.31
NEDD4L-223ENST00000588516 CEP350Q5VT06 3117 aa17■□□□□ 0.31
NEDD4L-223ENST00000588516 AK9Q5TCS8 1911 aa17■□□□□ 0.31
NEDD4L-223ENST00000588516 PNMA6EA0A0J9YXQ4 647 aa16.99■□□□□ 0.31
NEDD4L-223ENST00000588516 BTBD11A6QL63 1104 aa16.99■□□□□ 0.31
NEDD4L-223ENST00000588516 DDX58O95786 925 aaKnown RBP16.99■□□□□ 0.31
NEDD4L-223ENST00000588516 NCLP19338 710 aaKnown RBP16.99■□□□□ 0.31
NEDD4L-223ENST00000588516 MCTP1Q6DN14 999 aa16.99■□□□□ 0.31
NEDD4L-223ENST00000588516 ZNF530Q6P9A1 599 aaPredicted RBP16.99■□□□□ 0.31
NEDD4L-223ENST00000588516 ANO2Q9NQ90 1003 aa16.99■□□□□ 0.31
NEDD4L-223ENST00000588516 USP42Q9H9J4 1324 aaKnown RBP16.99■□□□□ 0.31
NEDD4L-223ENST00000588516 MTX1Q13505 466 aa16.98■□□□□ 0.31
NEDD4L-223ENST00000588516 PPP1R42Q7Z4L9 355 aa16.98■□□□□ 0.31
NEDD4L-223ENST00000588516 RHPN1Q8TCX5 695 aa16.98■□□□□ 0.31
NEDD4L-223ENST00000588516 HYPKQ9NX55 129 aa16.98■□□□□ 0.31
NEDD4L-223ENST00000588516 HIP1O00291 1037 aa16.97■□□□□ 0.31
NEDD4L-223ENST00000588516 GLRX3O76003 335 aaKnown RBP16.97■□□□□ 0.31
NEDD4L-223ENST00000588516 TMX3Q96JJ7 454 aa16.97■□□□□ 0.31
NEDD4L-223ENST00000588516 SLIT3O75094 1523 aa16.97■□□□□ 0.31
NEDD4L-223ENST00000588516 SRGAP3O43295 1099 aa16.96■□□□□ 0.31
NEDD4L-223ENST00000588516 NASPP49321 788 aaPredicted RBP16.96■□□□□ 0.31
NEDD4L-223ENST00000588516 HS1BP3Q53T59 392 aa16.96■□□□□ 0.31
NEDD4L-223ENST00000588516 BEND3Q5T5X7 828 aa16.96■□□□□ 0.31
NEDD4L-223ENST00000588516 CDCA7Q9BWT1 371 aaPredicted RBP16.96■□□□□ 0.31
NEDD4L-223ENST00000588516 LMBRD1Q9NUN5 540 aa16.96■□□□□ 0.31
NEDD4L-223ENST00000588516 PHF14O94880 888 aa16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms