RNA–Protein interactions for RNA: ENST00000588260.1

AC003043.1-201, humanhuman

TSL 3 BASIC

Gene AC003043.1, Length 337 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003043.1-201ENST00000588260 DUSP27Q5VZP5 1158 aa17.93■□□□□ 0.46
AC003043.1-201ENST00000588260 WWC3Q9ULE0 1092 aa17.93■□□□□ 0.46
AC003043.1-201ENST00000588260 SALL2Q9Y467 1007 aaPredicted RBP17.93■□□□□ 0.46
AC003043.1-201ENST00000588260 ERVV-1B6SEH8 477 aa17.92■□□□□ 0.46
AC003043.1-201ENST00000588260 DPEP1P16444 411 aa17.92■□□□□ 0.46
AC003043.1-201ENST00000588260 YBX3P16989 372 aaKnown RBP eCLIP17.92■□□□□ 0.46
AC003043.1-201ENST00000588260 MAP3K15Q6ZN16 1313 aa17.92■□□□□ 0.46
AC003043.1-201ENST00000588260 CHD4Q14839 1912 aa17.92■□□□□ 0.46
AC003043.1-201ENST00000588260 TTLL7Q6ZT98 887 aa17.91■□□□□ 0.46
AC003043.1-201ENST00000588260 CNBD1Q8NA66 436 aa17.91■□□□□ 0.46
AC003043.1-201ENST00000588260 ZBTB3Q9H5J0 574 aa17.91■□□□□ 0.46
AC003043.1-201ENST00000588260 NIP7Q9Y221 180 aaKnown RBP eCLIP17.91■□□□□ 0.46
AC003043.1-201ENST00000588260 IL16Q14005 1332 aa17.91■□□□□ 0.46
AC003043.1-201ENST00000588260 NUP98P52948 1817 aa17.91■□□□□ 0.46
AC003043.1-201ENST00000588260 CCER2I3L3R5 266 aa17.9■□□□□ 0.46
AC003043.1-201ENST00000588260 ANXA1P04083 346 aa17.9■□□□□ 0.46
AC003043.1-201ENST00000588260 YY1P25490 414 aa17.9■□□□□ 0.46
AC003043.1-201ENST00000588260 ST5P78524 1137 aa17.9■□□□□ 0.46
AC003043.1-201ENST00000588260 PDIA6Q15084 440 aa17.9■□□□□ 0.46
AC003043.1-201ENST00000588260 HLFQ16534 295 aa17.9■□□□□ 0.46
AC003043.1-201ENST00000588260 PROSER3Q2NL68 480 aa17.9■□□□□ 0.46
AC003043.1-201ENST00000588260 NBPF5PQ86XG9 351 aaPredicted RBP17.9■□□□□ 0.46
AC003043.1-201ENST00000588260 CHMP4AQ9BY43 222 aa17.9■□□□□ 0.46
AC003043.1-201ENST00000588260 DDX21Q9NR30 783 aaKnown RBP eCLIP17.9■□□□□ 0.46
AC003043.1-201ENST00000588260 ELL2O00472 640 aaPredicted RBP17.89■□□□□ 0.45
AC003043.1-201ENST00000588260 PRR5LQ6MZQ0 368 aa17.89■□□□□ 0.45
AC003043.1-201ENST00000588260 PIM2Q9P1W9 311 aa17.89■□□□□ 0.45
AC003043.1-201ENST00000588260 CHPF2Q9P2E5 772 aa17.89■□□□□ 0.45
AC003043.1-201ENST00000588260 DBF4Q9UBU7 674 aaPredicted RBP17.89■□□□□ 0.45
AC003043.1-201ENST00000588260 BCS1LQ9Y276 419 aa17.89■□□□□ 0.45
AC003043.1-201ENST00000588260 BRCA1P38398 1863 aaKnown RBP17.88■□□□□ 0.45
AC003043.1-201ENST00000588260 CHRNA5P30532 468 aa17.88■□□□□ 0.45
AC003043.1-201ENST00000588260 CACNB1Q02641 598 aaPredicted RBP17.88■□□□□ 0.45
AC003043.1-201ENST00000588260 AIMP1Q12904 312 aaKnown RBP17.88■□□□□ 0.45
AC003043.1-201ENST00000588260 DIEXFQ68CQ4 756 aaKnown RBP17.88■□□□□ 0.45
AC003043.1-201ENST00000588260 WDR63Q8IWG1 891 aa17.88■□□□□ 0.45
AC003043.1-201ENST00000588260 TSR2Q969E8 191 aaKnown RBP17.88■□□□□ 0.45
AC003043.1-201ENST00000588260 H0YIN7 160 aa17.87■□□□□ 0.45
AC003043.1-201ENST00000588260 PDE6BP35913 854 aa17.87■□□□□ 0.45
AC003043.1-201ENST00000588260 TPTE2Q6XPS3 522 aa17.87■□□□□ 0.45
AC003043.1-201ENST00000588260 COPS6Q7L5N1 327 aa17.87■□□□□ 0.45
AC003043.1-201ENST00000588260 LRP10Q7Z4F1 713 aa17.87■□□□□ 0.45
AC003043.1-201ENST00000588260 C2CD5Q86YS7 1000 aa17.87■□□□□ 0.45
AC003043.1-201ENST00000588260 XAGE3Q8WTP9 111 aa17.87■□□□□ 0.45
AC003043.1-201ENST00000588260 BRIP1Q9BX63 1249 aa17.87■□□□□ 0.45
AC003043.1-201ENST00000588260 PDZRN3Q9UPQ7 1066 aa17.87■□□□□ 0.45
AC003043.1-201ENST00000588260 ATP10DQ9P241 1426 aa17.87■□□□□ 0.45
AC003043.1-201ENST00000588260 FAM177BA6PVY3 158 aa17.86■□□□□ 0.45
AC003043.1-201ENST00000588260 GTF2E1P29083 439 aaPredicted RBP17.86■□□□□ 0.45
AC003043.1-201ENST00000588260 DALRD3Q5D0E6 543 aaKnown RBP17.86■□□□□ 0.45
AC003043.1-201ENST00000588260 GIGYF2Q6Y7W6 1299 aaKnown RBP17.86■□□□□ 0.45
AC003043.1-201ENST00000588260 CCDC24Q8N4L8 307 aa17.86■□□□□ 0.45
AC003043.1-201ENST00000588260 C8orf58Q8NAV2 365 aa17.86■□□□□ 0.45
AC003043.1-201ENST00000588260 HYPKQ9NX55 129 aa17.86■□□□□ 0.45
AC003043.1-201ENST00000588260 DLEC1Q9Y238 1755 aa17.86■□□□□ 0.45
AC003043.1-201ENST00000588260 ANKRD31Q8N7Z5 1873 aa17.86■□□□□ 0.45
AC003043.1-201ENST00000588260 KCNA3P22001 575 aa17.85■□□□□ 0.45
AC003043.1-201ENST00000588260 MAPK8IP2Q13387 824 aaPredicted RBP17.85■□□□□ 0.45
AC003043.1-201ENST00000588260 NYXQ9GZU5 481 aa17.85■□□□□ 0.45
AC003043.1-201ENST00000588260 ARFGEF1Q9Y6D6 1849 aa17.84■□□□□ 0.45
AC003043.1-201ENST00000588260 GPTP24298 496 aa17.84■□□□□ 0.45
AC003043.1-201ENST00000588260 HSP90AB3PQ58FF7 597 aa17.84■□□□□ 0.45
AC003043.1-201ENST00000588260 CCDC30Q5VVM6 783 aa17.84■□□□□ 0.45
AC003043.1-201ENST00000588260 FANCIQ9NVI1 1328 aa17.83■□□□□ 0.44
AC003043.1-201ENST00000588260 MYH16Q9H6N6 1097 aa17.83■□□□□ 0.44
AC003043.1-201ENST00000588260 ANKRD36CQ5JPF3 1778 aa17.83■□□□□ 0.44
AC003043.1-201ENST00000588260 GOLGA2Q08379 1002 aa17.82■□□□□ 0.44
AC003043.1-201ENST00000588260 TWISTNBQ3B726 338 aaPredicted RBP17.82■□□□□ 0.44
AC003043.1-201ENST00000588260 PARP10Q53GL7 1025 aa17.82■□□□□ 0.44
AC003043.1-201ENST00000588260 PPP1R42Q7Z4L9 355 aa17.82■□□□□ 0.44
AC003043.1-201ENST00000588260 ZNF34Q8IZ26 560 aa17.82■□□□□ 0.44
AC003043.1-201ENST00000588260 ZNF622Q969S3 477 aaKnown RBP eCLIP17.82■□□□□ 0.44
AC003043.1-201ENST00000588260 STK31Q9BXU1 1019 aa17.82■□□□□ 0.44
AC003043.1-201ENST00000588260 COL11A2P13942 1736 aaPredicted RBP17.81■□□□□ 0.44
AC003043.1-201ENST00000588260 IBTKQ9P2D0 1353 aaPredicted RBP17.81■□□□□ 0.44
AC003043.1-201ENST00000588260 GOLGB1Q14789 3259 aaKnown RBP17.81■□□□□ 0.44
AC003043.1-201ENST00000588260 ANKRD13DQ6ZTN6 518 aa17.81■□□□□ 0.44
AC003043.1-201ENST00000588260 ARHGAP27Q6ZUM4 889 aa17.81■□□□□ 0.44
AC003043.1-201ENST00000588260 TSPYL6Q8N831 410 aa17.81■□□□□ 0.44
AC003043.1-201ENST00000588260 TTLL6Q8N841 843 aa17.81■□□□□ 0.44
AC003043.1-201ENST00000588260 PLBD2Q8NHP8 589 aa17.81■□□□□ 0.44
AC003043.1-201ENST00000588260 UBN2Q6ZU65 1347 aa17.8■□□□□ 0.44
AC003043.1-201ENST00000588260 SUSD4Q5VX71 490 aa17.79■□□□□ 0.44
AC003043.1-201ENST00000588260 DDX58O95786 925 aaKnown RBP17.78■□□□□ 0.44
AC003043.1-201ENST00000588260 TCIRG1Q13488 830 aa17.78■□□□□ 0.44
AC003043.1-201ENST00000588260 STYK1Q6J9G0 422 aa17.78■□□□□ 0.44
AC003043.1-201ENST00000588260 NUTM1Q86Y26 1132 aa17.78■□□□□ 0.44
AC003043.1-201ENST00000588260 CNKSR1Q969H4 720 aa17.78■□□□□ 0.44
AC003043.1-201ENST00000588260 MASTLQ96GX5 879 aa17.78■□□□□ 0.44
AC003043.1-201ENST00000588260 UTP14AQ9BVJ6 771 aaKnown RBP17.78■□□□□ 0.44
AC003043.1-201ENST00000588260 ARFGEF2Q9Y6D5 1785 aa17.78■□□□□ 0.44
AC003043.1-201ENST00000588260 UTRNP46939 3433 aa17.77■□□□□ 0.44
AC003043.1-201ENST00000588260 NTSR2O95665 410 aa17.77■□□□□ 0.44
AC003043.1-201ENST00000588260 SRGNP10124 158 aa17.77■□□□□ 0.44
AC003043.1-201ENST00000588260 EXOSC9Q06265 439 aaKnown RBP17.77■□□□□ 0.44
AC003043.1-201ENST00000588260 ERFEQ4G0M1 354 aa17.77■□□□□ 0.44
AC003043.1-201ENST00000588260 RIC3Q7Z5B4 369 aa17.77■□□□□ 0.44
AC003043.1-201ENST00000588260 MIER1Q8N108 512 aa17.77■□□□□ 0.44
AC003043.1-201ENST00000588260 PHAXQ9H814 394 aaKnown RBP17.77■□□□□ 0.44
AC003043.1-201ENST00000588260 RNF123Q5XPI4 1314 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms