RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 SMC4Q9NTJ3 1288 aa18.34■□□□□ 0.53
CCDC43-203ENST00000588210 PHF14O94880 888 aa18.33■□□□□ 0.52
CCDC43-203ENST00000588210 TRAPPC3LQ5T215 181 aa18.33■□□□□ 0.52
CCDC43-203ENST00000588210 ZBTB1Q9Y2K1 713 aa18.33■□□□□ 0.52
CCDC43-203ENST00000588210 TBC1D32Q96NH3 1257 aa18.32■□□□□ 0.52
CCDC43-203ENST00000588210 UPF2Q9HAU5 1272 aaKnown RBP18.32■□□□□ 0.52
CCDC43-203ENST00000588210 TRIM27P14373 513 aa18.31■□□□□ 0.52
CCDC43-203ENST00000588210 HDAC1Q13547 482 aaPredicted RBP18.31■□□□□ 0.52
CCDC43-203ENST00000588210 SOS1Q07889 1333 aaPredicted RBP18.31■□□□□ 0.52
CCDC43-203ENST00000588210 FRAT2O75474 233 aaPredicted RBP18.3■□□□□ 0.52
CCDC43-203ENST00000588210 A1BGP04217 495 aa18.3■□□□□ 0.52
CCDC43-203ENST00000588210 SMIM5Q71RC9 77 aa18.3■□□□□ 0.52
CCDC43-203ENST00000588210 SSH1Q8WYL5 1049 aa18.3■□□□□ 0.52
CCDC43-203ENST00000588210 ARHGEF1Q92888 912 aaKnown RBP18.3■□□□□ 0.52
CCDC43-203ENST00000588210 MTFR1LQ9H019 292 aa18.3■□□□□ 0.52
CCDC43-203ENST00000588210 DDX19BQ9UMR2 479 aa18.3■□□□□ 0.52
CCDC43-203ENST00000588210 LAMB4A4D0S4 1761 aa18.3■□□□□ 0.52
CCDC43-203ENST00000588210 ATF7IPQ6VMQ6 1270 aa18.3■□□□□ 0.52
CCDC43-203ENST00000588210 HOXB7P09629 217 aa18.29■□□□□ 0.52
CCDC43-203ENST00000588210 IL6STP40189 918 aaPredicted RBP18.29■□□□□ 0.52
CCDC43-203ENST00000588210 ZBTB7AO95365 584 aa18.29■□□□□ 0.52
CCDC43-203ENST00000588210 RFC4P35249 363 aa18.29■□□□□ 0.52
CCDC43-203ENST00000588210 EIF5P55010 431 aaKnown RBP18.29■□□□□ 0.52
CCDC43-203ENST00000588210 KIF16BQ96L93 1317 aa18.28■□□□□ 0.52
CCDC43-203ENST00000588210 KRT24Q2M2I5 525 aa18.28■□□□□ 0.52
CCDC43-203ENST00000588210 SPON1Q9HCB6 807 aa18.28■□□□□ 0.52
CCDC43-203ENST00000588210 COL15A1P39059 1388 aa18.27■□□□□ 0.52
CCDC43-203ENST00000588210 ERBB4Q15303 1308 aa18.26■□□□□ 0.51
CCDC43-203ENST00000588210 A0A087WZG4 1122 aa18.26■□□□□ 0.51
CCDC43-203ENST00000588210 EIF2S2P20042 333 aaKnown RBP18.26■□□□□ 0.51
CCDC43-203ENST00000588210 ALDH1L2Q3SY69 923 aa18.26■□□□□ 0.51
CCDC43-203ENST00000588210 ATF5Q9Y2D1 282 aaPredicted RBP18.26■□□□□ 0.51
CCDC43-203ENST00000588210 NBPF26B4DH59 902 aa18.25■□□□□ 0.51
CCDC43-203ENST00000588210 NBPF10Q6P3W6 841 aaKnown RBP18.25■□□□□ 0.51
CCDC43-203ENST00000588210 ITPRIPQ8IWB1 547 aa18.25■□□□□ 0.51
CCDC43-203ENST00000588210 NBPF15Q8N660 670 aa18.25■□□□□ 0.51
CCDC43-203ENST00000588210 IL27Q8NEV9 243 aa18.25■□□□□ 0.51
CCDC43-203ENST00000588210 NOB1Q9ULX3 412 aaKnown RBP18.25■□□□□ 0.51
CCDC43-203ENST00000588210 C4AP0C0L4 1744 aa18.24■□□□□ 0.51
CCDC43-203ENST00000588210 PIP4K2AP48426 406 aaPredicted RBP18.24■□□□□ 0.51
CCDC43-203ENST00000588210 SMC5Q8IY18 1101 aa18.24■□□□□ 0.51
CCDC43-203ENST00000588210 C8orf58Q8NAV2 365 aa18.24■□□□□ 0.51
CCDC43-203ENST00000588210 CHMP4AQ9BY43 222 aa18.24■□□□□ 0.51
CCDC43-203ENST00000588210 ZNF330Q9Y3S2 320 aaPredicted RBP18.24■□□□□ 0.51
CCDC43-203ENST00000588210 USP42Q9H9J4 1324 aaKnown RBP18.24■□□□□ 0.51
CCDC43-203ENST00000588210 IPO8O15397 1037 aaKnown RBP18.24■□□□□ 0.51
CCDC43-203ENST00000588210 ZPR1O75312 459 aa18.24■□□□□ 0.51
CCDC43-203ENST00000588210 NARFQ9UHQ1 456 aa18.24■□□□□ 0.51
CCDC43-203ENST00000588210 HDGFL1Q5TGJ6 251 aa18.23■□□□□ 0.51
CCDC43-203ENST00000588210 ZNF428Q96B54 188 aa18.23■□□□□ 0.51
CCDC43-203ENST00000588210 ANTXR1Q9H6X2 564 aa18.23■□□□□ 0.51
CCDC43-203ENST00000588210 ELL2O00472 640 aaPredicted RBP18.22■□□□□ 0.51
CCDC43-203ENST00000588210 NLGN1Q8N2Q7 840 aa18.22■□□□□ 0.51
CCDC43-203ENST00000588210 TMEM57Q8N5G2 664 aa18.22■□□□□ 0.51
CCDC43-203ENST00000588210 ZBTB40Q9NUA8 1239 aa18.22■□□□□ 0.51
CCDC43-203ENST00000588210 LRP5O75197 1615 aa18.22■□□□□ 0.51
CCDC43-203ENST00000588210 COL24A1Q17RW2 1714 aa18.22■□□□□ 0.51
CCDC43-203ENST00000588210 GYS1P13807 737 aa18.22■□□□□ 0.51
CCDC43-203ENST00000588210 PTGER2P43116 358 aa18.22■□□□□ 0.51
CCDC43-203ENST00000588210 BRPF1P55201 1214 aaPredicted RBP18.22■□□□□ 0.51
CCDC43-203ENST00000588210 SGIP1Q9BQI5 828 aa18.22■□□□□ 0.51
CCDC43-203ENST00000588210 POLD1P28340 1107 aa18.21■□□□□ 0.51
CCDC43-203ENST00000588210 PDIA6Q15084 440 aa18.21■□□□□ 0.51
CCDC43-203ENST00000588210 SRP68Q9UHB9 627 aaKnown RBP18.21■□□□□ 0.51
CCDC43-203ENST00000588210 MYL6BP14649 208 aa18.21■□□□□ 0.51
CCDC43-203ENST00000588210 TWISTNBQ3B726 338 aaPredicted RBP18.21■□□□□ 0.51
CCDC43-203ENST00000588210 USPL1Q5W0Q7 1092 aa18.21■□□□□ 0.51
CCDC43-203ENST00000588210 MSL1Q68DK7 614 aa18.21■□□□□ 0.51
CCDC43-203ENST00000588210 DZIP3Q86Y13 1208 aaKnown RBP18.21■□□□□ 0.51
CCDC43-203ENST00000588210 TSPYL6Q8N831 410 aa18.21■□□□□ 0.51
CCDC43-203ENST00000588210 NECTIN2Q92692 538 aa18.21■□□□□ 0.51
CCDC43-203ENST00000588210 TBC1D2Q9BYX2 928 aa18.21■□□□□ 0.51
CCDC43-203ENST00000588210 TBC1D2BQ9UPU7 963 aa18.21■□□□□ 0.51
CCDC43-203ENST00000588210 ARXQ96QS3 562 aa18.2■□□□□ 0.5
CCDC43-203ENST00000588210 DDX21Q9NR30 783 aaKnown RBP eCLIP18.2■□□□□ 0.5
CCDC43-203ENST00000588210 DBF4Q9UBU7 674 aaPredicted RBP18.2■□□□□ 0.5
CCDC43-203ENST00000588210 SRCAPQ6ZRS2 3230 aa18.19■□□□□ 0.5
CCDC43-203ENST00000588210 CCDC30Q5VVM6 783 aa18.18■□□□□ 0.5
CCDC43-203ENST00000588210 LRP10Q7Z4F1 713 aa18.18■□□□□ 0.5
CCDC43-203ENST00000588210 SLKQ9H2G2 1235 aaPredicted RBP18.18■□□□□ 0.5
CCDC43-203ENST00000588210 CHPF2Q9P2E5 772 aa18.18■□□□□ 0.5
CCDC43-203ENST00000588210 RGL2O15211 777 aa18.17■□□□□ 0.5
CCDC43-203ENST00000588210 CAMTA2O94983 1202 aa18.17■□□□□ 0.5
CCDC43-203ENST00000588210 PROSER3Q2NL68 480 aa18.17■□□□□ 0.5
CCDC43-203ENST00000588210 BCL2L12Q9HB09 334 aa18.17■□□□□ 0.5
CCDC43-203ENST00000588210 VAMP4O75379 141 aa18.16■□□□□ 0.5
CCDC43-203ENST00000588210 ANXA1P04083 346 aa18.16■□□□□ 0.5
CCDC43-203ENST00000588210 C22orf23Q9BZE7 217 aa18.16■□□□□ 0.5
CCDC43-203ENST00000588210 HYPKQ9NX55 129 aa18.16■□□□□ 0.5
CCDC43-203ENST00000588210 CLEC4GQ6UXB4 293 aa18.16■□□□□ 0.5
CCDC43-203ENST00000588210 KIF6Q6ZMV9 814 aa18.16■□□□□ 0.5
CCDC43-203ENST00000588210 PPP1R1BQ9UD71 204 aaPredicted RBP18.16■□□□□ 0.5
CCDC43-203ENST00000588210 SCN7AQ01118 1682 aa18.15■□□□□ 0.5
CCDC43-203ENST00000588210 MMP10P09238 476 aa18.15■□□□□ 0.5
CCDC43-203ENST00000588210 NUCB1Q02818 461 aa18.15■□□□□ 0.5
CCDC43-203ENST00000588210 BRPF3Q9ULD4 1205 aa18.15■□□□□ 0.5
CCDC43-203ENST00000588210 ZNF652Q9Y2D9 606 aa18.15■□□□□ 0.5
CCDC43-203ENST00000588210 ERVV-1B6SEH8 477 aa18.14■□□□□ 0.5
CCDC43-203ENST00000588210 TM4SF1P30408 202 aa18.14■□□□□ 0.5
CCDC43-203ENST00000588210 TTLL7Q6ZT98 887 aa18.14■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 224.2 ms