RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 COL11A2P13942 1736 aaPredicted RBP18.8■□□□□ 0.6
DNMT1-213ENST00000587604 POTECB2RU33 542 aa18.79■□□□□ 0.6
DNMT1-213ENST00000587604 SNRPA1P09661 255 aaKnown RBP18.79■□□□□ 0.6
DNMT1-213ENST00000587604 U2AF1L5P0DN76 240 aaPredicted RBP18.79■□□□□ 0.6
DNMT1-213ENST00000587604 SRGNP10124 158 aa18.79■□□□□ 0.6
DNMT1-213ENST00000587604 U2AF1Q01081 240 aaKnown RBP eCLIP18.79■□□□□ 0.6
DNMT1-213ENST00000587604 CLEC4GQ6UXB4 293 aa18.79■□□□□ 0.6
DNMT1-213ENST00000587604 SLX4Q8IY92 1834 aa18.79■□□□□ 0.6
DNMT1-213ENST00000587604 LTBP3Q9NS15 1303 aa18.78■□□□□ 0.6
DNMT1-213ENST00000587604 MASTLQ96GX5 879 aa18.78■□□□□ 0.6
DNMT1-213ENST00000587604 BCORQ6W2J9 1755 aa18.78■□□□□ 0.6
DNMT1-213ENST00000587604 PRAMEF22A3QJZ6 481 aa18.77■□□□□ 0.6
DNMT1-213ENST00000587604 PPP2R1AP30153 589 aa18.77■□□□□ 0.6
DNMT1-213ENST00000587604 PIP4K2AP48426 406 aaPredicted RBP18.77■□□□□ 0.6
DNMT1-213ENST00000587604 SOGA3Q5TF21 947 aa18.77■□□□□ 0.6
DNMT1-213ENST00000587604 MCM10Q7L590 875 aa18.77■□□□□ 0.6
DNMT1-213ENST00000587604 TAOK3Q9H2K8 898 aa18.77■□□□□ 0.6
DNMT1-213ENST00000587604 CACNA1SQ13698 1873 aa18.76■□□□□ 0.59
DNMT1-213ENST00000587604 HTATSF1O43719 755 aaKnown RBP18.76■□□□□ 0.59
DNMT1-213ENST00000587604 PRPF40BQ6NWY9 871 aaKnown RBP18.76■□□□□ 0.59
DNMT1-213ENST00000587604 ZNF652Q9Y2D9 606 aa18.76■□□□□ 0.59
DNMT1-213ENST00000587604 RGL2O15211 777 aa18.75■□□□□ 0.59
DNMT1-213ENST00000587604 NBPF5PQ86XG9 351 aaPredicted RBP18.75■□□□□ 0.59
DNMT1-213ENST00000587604 ARFGEF2Q9Y6D5 1785 aa18.74■□□□□ 0.59
DNMT1-213ENST00000587604 DCTN1Q14203 1278 aa18.73■□□□□ 0.59
DNMT1-213ENST00000587604 TPTE2Q6XPS3 522 aa18.73■□□□□ 0.59
DNMT1-213ENST00000587604 C7orf43Q8WVR3 580 aa18.73■□□□□ 0.59
DNMT1-213ENST00000587604 KLRG2A4D1S0 409 aaPredicted RBP18.72■□□□□ 0.59
DNMT1-213ENST00000587604 NBPF26B4DH59 902 aa18.72■□□□□ 0.59
DNMT1-213ENST00000587604 TAF7Q15545 349 aaPredicted RBP18.72■□□□□ 0.59
DNMT1-213ENST00000587604 COL13A1Q5TAT6 717 aaPredicted RBP18.72■□□□□ 0.59
DNMT1-213ENST00000587604 NBPF10Q6P3W6 841 aaKnown RBP18.72■□□□□ 0.59
DNMT1-213ENST00000587604 NBPF15Q8N660 670 aa18.72■□□□□ 0.59
DNMT1-213ENST00000587604 DDNO94850 711 aaPredicted RBP18.71■□□□□ 0.59
DNMT1-213ENST00000587604 NPR1P16066 1061 aa18.71■□□□□ 0.59
DNMT1-213ENST00000587604 NIP7Q9Y221 180 aaKnown RBP eCLIP18.71■□□□□ 0.59
DNMT1-213ENST00000587604 CCDC93Q567U6 631 aa18.69■□□□□ 0.58
DNMT1-213ENST00000587604 CHADLQ6NUI6 762 aa18.69■□□□□ 0.58
DNMT1-213ENST00000587604 MIS18AQ9NYP9 233 aa18.68■□□□□ 0.58
DNMT1-213ENST00000587604 IQCA1LA6NCM1 817 aa18.67■□□□□ 0.58
DNMT1-213ENST00000587604 HLFQ16534 295 aa18.67■□□□□ 0.58
DNMT1-213ENST00000587604 SCN4AP35499 1836 aa18.67■□□□□ 0.58
DNMT1-213ENST00000587604 FAM177BA6PVY3 158 aa18.66■□□□□ 0.58
DNMT1-213ENST00000587604 NEFMP07197 916 aa18.66■□□□□ 0.58
DNMT1-213ENST00000587604 ALDH1B1P30837 517 aa18.66■□□□□ 0.58
DNMT1-213ENST00000587604 FKBP4Q02790 459 aaKnown RBP eCLIP18.66■□□□□ 0.58
DNMT1-213ENST00000587604 RTKN2Q8IZC4 609 aa18.66■□□□□ 0.58
DNMT1-213ENST00000587604 PNISRQ8TF01 805 aaKnown RBP18.66■□□□□ 0.58
DNMT1-213ENST00000587604 L3MBTL3Q96JM7 780 aaPredicted RBP18.66■□□□□ 0.58
DNMT1-213ENST00000587604 CREBZFQ9NS37 354 aa18.66■□□□□ 0.58
DNMT1-213ENST00000587604 DLG5Q8TDM6 1919 aa18.66■□□□□ 0.58
DNMT1-213ENST00000587604 POTEIP0CG38 1075 aa18.65■□□□□ 0.58
DNMT1-213ENST00000587604 POTEJP0CG39 1038 aa18.65■□□□□ 0.58
DNMT1-213ENST00000587604 HSPA1AP0DMV8 641 aaKnown RBP18.65■□□□□ 0.58
DNMT1-213ENST00000587604 HSPA1BP0DMV9 641 aaKnown RBP18.65■□□□□ 0.58
DNMT1-213ENST00000587604 GTF2E1P29083 439 aaPredicted RBP18.65■□□□□ 0.58
DNMT1-213ENST00000587604 ERVV-1B6SEH8 477 aa18.64■□□□□ 0.57
DNMT1-213ENST00000587604 ZNF277Q9NRM2 450 aaPredicted RBP18.64■□□□□ 0.57
DNMT1-213ENST00000587604 LAMB4A4D0S4 1761 aa18.63■□□□□ 0.57
DNMT1-213ENST00000587604 NUP98P52948 1817 aa18.63■□□□□ 0.57
DNMT1-213ENST00000587604 OLFM4Q6UX06 510 aa18.63■□□□□ 0.57
DNMT1-213ENST00000587604 LDHDQ86WU2 507 aa18.63■□□□□ 0.57
DNMT1-213ENST00000587604 TNS4Q8IZW8 715 aa18.63■□□□□ 0.57
DNMT1-213ENST00000587604 NYXQ9GZU5 481 aa18.63■□□□□ 0.57
DNMT1-213ENST00000587604 TAF1DQ9H5J8 278 aaPredicted RBP18.63■□□□□ 0.57
DNMT1-213ENST00000587604 NGEFQ8N5V2 710 aa18.62■□□□□ 0.57
DNMT1-213ENST00000587604 PLEKHF1Q96S99 279 aa18.62■□□□□ 0.57
DNMT1-213ENST00000587604 KDM3BQ7LBC6 1761 aa18.62■□□□□ 0.57
DNMT1-213ENST00000587604 MAP3K15Q6ZN16 1313 aa18.61■□□□□ 0.57
DNMT1-213ENST00000587604 PASKQ96RG2 1323 aa18.61■□□□□ 0.57
DNMT1-213ENST00000587604 EIF4A1P60842 406 aaKnown RBP18.61■□□□□ 0.57
DNMT1-213ENST00000587604 CRY2Q49AN0 593 aa18.61■□□□□ 0.57
DNMT1-213ENST00000587604 SYNE4Q8N205 404 aa18.61■□□□□ 0.57
DNMT1-213ENST00000587604 ZNF541Q9H0D2 1346 aa18.6■□□□□ 0.57
DNMT1-213ENST00000587604 IARSP41252 1262 aaKnown RBP18.6■□□□□ 0.57
DNMT1-213ENST00000587604 MKRN1Q9UHC7 482 aaKnown RBP18.6■□□□□ 0.57
DNMT1-213ENST00000587604 RRP7AQ9Y3A4 280 aaKnown RBP18.6■□□□□ 0.57
DNMT1-213ENST00000587604 FZD9O00144 591 aa18.59■□□□□ 0.57
DNMT1-213ENST00000587604 NFE2L2Q16236 605 aa18.59■□□□□ 0.57
DNMT1-213ENST00000587604 CC2D2BQ6DHV5 1058 aa18.59■□□□□ 0.57
DNMT1-213ENST00000587604 KIF6Q6ZMV9 814 aa18.59■□□□□ 0.57
DNMT1-213ENST00000587604 NUTM1Q86Y26 1132 aa18.59■□□□□ 0.57
DNMT1-213ENST00000587604 PSMD1Q99460 953 aa18.59■□□□□ 0.57
DNMT1-213ENST00000587604 PNNQ9H307 717 aaKnown RBP18.59■□□□□ 0.57
DNMT1-213ENST00000587604 HACL1Q9UJ83 578 aa18.59■□□□□ 0.57
DNMT1-213ENST00000587604 ITGBL1O95965 494 aaPredicted RBP18.58■□□□□ 0.56
DNMT1-213ENST00000587604 TTLL7Q6ZT98 887 aa18.58■□□□□ 0.56
DNMT1-213ENST00000587604 ABCC12Q96J65 1359 aa18.57■□□□□ 0.56
DNMT1-213ENST00000587604 MYL6BP14649 208 aa18.57■□□□□ 0.56
DNMT1-213ENST00000587604 HOXA10P31260 410 aaPredicted RBP18.57■□□□□ 0.56
DNMT1-213ENST00000587604 EPHX2P34913 555 aa18.57■□□□□ 0.56
DNMT1-213ENST00000587604 EAPPQ56P03 285 aaPredicted RBP18.57■□□□□ 0.56
DNMT1-213ENST00000587604 PNMA8AQ86V59 439 aaPredicted RBP18.57■□□□□ 0.56
DNMT1-213ENST00000587604 THUMPD2Q9BTF0 503 aaKnown RBP18.57■□□□□ 0.56
DNMT1-213ENST00000587604 GRIPAP1Q4V328 841 aa18.56■□□□□ 0.56
DNMT1-213ENST00000587604 SUSD4Q5VX71 490 aa18.56■□□□□ 0.56
DNMT1-213ENST00000587604 GPC2Q8N158 579 aa18.56■□□□□ 0.56
DNMT1-213ENST00000587604 JDP2Q8WYK2 163 aa18.56■□□□□ 0.56
DNMT1-213ENST00000587604 CLEC11AQ9Y240 323 aa18.56■□□□□ 0.56
DNMT1-213ENST00000587604 SNED1Q8TER0 1413 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms