RNA–Protein interactions for RNA: ENST00000587502.2

LSM7-204, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM7, Length 575 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-204ENST00000587502 TTLL6Q8N841 843 aa30.54■■■□□ 2.48
LSM7-204ENST00000587502 NBPF5PQ86XG9 351 aaPredicted RBP30.52■■■□□ 2.48
LSM7-204ENST00000587502 GPBP1L1Q9HC44 474 aaPredicted RBP30.52■■■□□ 2.48
LSM7-204ENST00000587502 TRIM35Q9UPQ4 493 aa30.52■■■□□ 2.48
LSM7-204ENST00000587502 ERVV-1B6SEH8 477 aa30.51■■■□□ 2.47
LSM7-204ENST00000587502 C1QTNF8P60827 252 aa30.5■■■□□ 2.47
LSM7-204ENST00000587502 KIF6Q6ZMV9 814 aa30.5■■■□□ 2.47
LSM7-204ENST00000587502 NIP7Q9Y221 180 aaKnown RBP eCLIP30.5■■■□□ 2.47
LSM7-204ENST00000587502 DLEC1Q9Y238 1755 aa30.49■■■□□ 2.47
LSM7-204ENST00000587502 CHL1O00533 1208 aa30.49■■■□□ 2.47
LSM7-204ENST00000587502 TPTE2Q6XPS3 522 aa30.49■■■□□ 2.47
LSM7-204ENST00000587502 NGEFQ8N5V2 710 aa30.49■■■□□ 2.47
LSM7-204ENST00000587502 MYL6BP14649 208 aa30.48■■■□□ 2.47
LSM7-204ENST00000587502 MAP3K15Q6ZN16 1313 aa30.47■■■□□ 2.47
LSM7-204ENST00000587502 HLFQ16534 295 aa30.46■■■□□ 2.47
LSM7-204ENST00000587502 ZNF622Q969S3 477 aaKnown RBP eCLIP30.46■■■□□ 2.47
LSM7-204ENST00000587502 LAS1LQ9Y4W2 734 aaKnown RBP30.46■■■□□ 2.47
LSM7-204ENST00000587502 EIF2S2P20042 333 aaKnown RBP30.45■■■□□ 2.47
LSM7-204ENST00000587502 CCDC24Q8N4L8 307 aa30.45■■■□□ 2.47
LSM7-204ENST00000587502 ANKRD31Q8N7Z5 1873 aa30.44■■■□□ 2.46
LSM7-204ENST00000587502 C9orf131Q5VYM1 1079 aa30.44■■■□□ 2.46
LSM7-204ENST00000587502 CALD1Q05682 793 aaKnown RBP30.43■■■□□ 2.46
LSM7-204ENST00000587502 STYK1Q6J9G0 422 aa30.43■■■□□ 2.46
LSM7-204ENST00000587502 ZNF526Q8TF50 670 aaPredicted RBP30.43■■■□□ 2.46
LSM7-204ENST00000587502 CNKSR1Q969H4 720 aa30.43■■■□□ 2.46
LSM7-204ENST00000587502 CFAP44Q96MT7 982 aa30.43■■■□□ 2.46
LSM7-204ENST00000587502 APAF1O14727 1248 aa30.42■■■□□ 2.46
LSM7-204ENST00000587502 ANP32CO43423 234 aa30.42■■■□□ 2.46
LSM7-204ENST00000587502 TTLL7Q6ZT98 887 aa30.42■■■□□ 2.46
LSM7-204ENST00000587502 MASTLQ96GX5 879 aa30.42■■■□□ 2.46
LSM7-204ENST00000587502 NYXQ9GZU5 481 aa30.42■■■□□ 2.46
LSM7-204ENST00000587502 SRGNP10124 158 aa30.41■■■□□ 2.46
LSM7-204ENST00000587502 GTF2E1P29083 439 aaPredicted RBP30.41■■■□□ 2.46
LSM7-204ENST00000587502 HOXB7P09629 217 aa30.4■■■□□ 2.46
LSM7-204ENST00000587502 PDIA6Q15084 440 aa30.39■■■□□ 2.46
LSM7-204ENST00000587502 RNF181Q9P0P0 153 aa30.39■■■□□ 2.46
LSM7-204ENST00000587502 ZBTB3Q9H5J0 574 aa30.38■■■□□ 2.45
LSM7-204ENST00000587502 KLRG2A4D1S0 409 aaPredicted RBP30.37■■■□□ 2.45
LSM7-204ENST00000587502 FAM177BA6PVY3 158 aa30.37■■■□□ 2.45
LSM7-204ENST00000587502 GIGYF2Q6Y7W6 1299 aaKnown RBP30.37■■■□□ 2.45
LSM7-204ENST00000587502 NUP98P52948 1817 aa30.37■■■□□ 2.45
LSM7-204ENST00000587502 LMNB1P20700 586 aa30.36■■■□□ 2.45
LSM7-204ENST00000587502 LRP10Q7Z4F1 713 aa30.36■■■□□ 2.45
LSM7-204ENST00000587502 NPR1P16066 1061 aa30.35■■■□□ 2.45
LSM7-204ENST00000587502 SOGA3Q5TF21 947 aa30.35■■■□□ 2.45
LSM7-204ENST00000587502 DDX21Q9NR30 783 aaKnown RBP eCLIP30.35■■■□□ 2.45
LSM7-204ENST00000587502 IFT57Q9NWB7 429 aa30.35■■■□□ 2.45
LSM7-204ENST00000587502 ZC3H4Q9UPT8 1303 aaKnown RBP30.35■■■□□ 2.45
LSM7-204ENST00000587502 COL11A2P13942 1736 aaPredicted RBP30.35■■■□□ 2.45
LSM7-204ENST00000587502 IBTKQ9P2D0 1353 aaPredicted RBP30.34■■■□□ 2.45
LSM7-204ENST00000587502 GNAI1P63096 354 aa30.34■■■□□ 2.45
LSM7-204ENST00000587502 C21orf2O43822 256 aa30.33■■■□□ 2.45
LSM7-204ENST00000587502 ZNF853P0CG23 659 aa30.33■■■□□ 2.45
LSM7-204ENST00000587502 ZNF34Q8IZ26 560 aa30.33■■■□□ 2.45
LSM7-204ENST00000587502 NECTIN2Q92692 538 aa30.33■■■□□ 2.45
LSM7-204ENST00000587502 SBF1O95248 1867 aa30.33■■■□□ 2.45
LSM7-204ENST00000587502 RASSF7Q02833 373 aa30.32■■■□□ 2.44
LSM7-204ENST00000587502 PROSER3Q2NL68 480 aa30.32■■■□□ 2.44
LSM7-204ENST00000587502 CCDC184Q52MB2 194 aa30.32■■■□□ 2.44
LSM7-204ENST00000587502 PARP10Q53GL7 1025 aa30.32■■■□□ 2.44
LSM7-204ENST00000587502 HDGFL1Q5TGJ6 251 aa30.32■■■□□ 2.44
LSM7-204ENST00000587502 PRPF40BQ6NWY9 871 aaKnown RBP30.32■■■□□ 2.44
LSM7-204ENST00000587502 MBIPQ9NS73 344 aa30.32■■■□□ 2.44
LSM7-204ENST00000587502 GPTP24298 496 aa30.31■■■□□ 2.44
LSM7-204ENST00000587502 KRT24Q2M2I5 525 aa30.31■■■□□ 2.44
LSM7-204ENST00000587502 HSP90AB3PQ58FF7 597 aa30.31■■■□□ 2.44
LSM7-204ENST00000587502 COPS6Q7L5N1 327 aa30.31■■■□□ 2.44
LSM7-204ENST00000587502 PPP1R42Q7Z4L9 355 aa30.31■■■□□ 2.44
LSM7-204ENST00000587502 KDM2BQ8NHM5 1336 aa30.3■■■□□ 2.44
LSM7-204ENST00000587502 ANXA1P04083 346 aa30.3■■■□□ 2.44
LSM7-204ENST00000587502 MRS2Q9HD23 443 aa30.3■■■□□ 2.44
LSM7-204ENST00000587502 UBN2Q6ZU65 1347 aa30.29■■■□□ 2.44
LSM7-204ENST00000587502 NFKBIEO00221 500 aa30.29■■■□□ 2.44
LSM7-204ENST00000587502 ALDH1B1P30837 517 aa30.29■■■□□ 2.44
LSM7-204ENST00000587502 DUSP27Q5VZP5 1158 aa30.29■■■□□ 2.44
LSM7-204ENST00000587502 XAGE3Q8WTP9 111 aa30.29■■■□□ 2.44
LSM7-204ENST00000587502 ZNF219Q9P2Y4 722 aaPredicted RBP30.29■■■□□ 2.44
LSM7-204ENST00000587502 DBF4Q9UBU7 674 aaPredicted RBP30.29■■■□□ 2.44
LSM7-204ENST00000587502 KIF3CO14782 793 aa30.28■■■□□ 2.44
LSM7-204ENST00000587502 AIMP1Q12904 312 aaKnown RBP30.28■■■□□ 2.44
LSM7-204ENST00000587502 SUSD4Q5VX71 490 aa30.28■■■□□ 2.44
LSM7-204ENST00000587502 ERFEQ4G0M1 354 aa30.27■■■□□ 2.44
LSM7-204ENST00000587502 NUTM1Q86Y26 1132 aa30.27■■■□□ 2.44
LSM7-204ENST00000587502 CHMP4AQ9BY43 222 aa30.27■■■□□ 2.44
LSM7-204ENST00000587502 CHPF2Q9P2E5 772 aa30.27■■■□□ 2.44
LSM7-204ENST00000587502 LTBP3Q9NS15 1303 aa30.26■■■□□ 2.44
LSM7-204ENST00000587502 ARFGEF2Q9Y6D5 1785 aa30.26■■■□□ 2.44
LSM7-204ENST00000587502 CCDC27Q2M243 656 aa30.26■■■□□ 2.43
LSM7-204ENST00000587502 RIC1Q4ADV7 1423 aa30.26■■■□□ 2.43
LSM7-204ENST00000587502 SLX4Q8IY92 1834 aa30.26■■■□□ 2.43
LSM7-204ENST00000587502 CRY2Q49AN0 593 aa30.25■■■□□ 2.43
LSM7-204ENST00000587502 NCBP3Q53F19 620 aaKnown RBP30.25■■■□□ 2.43
LSM7-204ENST00000587502 TAOK3Q9H2K8 898 aa30.25■■■□□ 2.43
LSM7-204ENST00000587502 HYPKQ9NX55 129 aa30.25■■■□□ 2.43
LSM7-204ENST00000587502 RNF123Q5XPI4 1314 aa30.24■■■□□ 2.43
LSM7-204ENST00000587502 NTSR2O95665 410 aa30.24■■■□□ 2.43
LSM7-204ENST00000587502 UTP14AQ9BVJ6 771 aaKnown RBP30.24■■■□□ 2.43
LSM7-204ENST00000587502 CCDC93Q567U6 631 aa30.23■■■□□ 2.43
LSM7-204ENST00000587502 C7orf43Q8WVR3 580 aa30.23■■■□□ 2.43
LSM7-204ENST00000587502 ABCC12Q96J65 1359 aa30.23■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms