RNA–Protein interactions for RNA: ENST00000587470.1

VMP1-205, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-205ENST00000587470 C7orf43Q8WVR3 580 aa8.88□□□□□ -0.99
VMP1-205ENST00000587470 NEUROD4Q9HD90 331 aa8.88□□□□□ -0.99
VMP1-205ENST00000587470 DCDC2BA2VCK2 349 aa8.87□□□□□ -0.99
VMP1-205ENST00000587470 FAM196BA6NMK8 535 aa8.87□□□□□ -0.99
VMP1-205ENST00000587470 KHNYNO15037 678 aaKnown RBP8.87□□□□□ -0.99
VMP1-205ENST00000587470 ADAM23O75077 832 aa8.87□□□□□ -0.99
VMP1-205ENST00000587470 FAM157BP0CG42 384 aa8.87□□□□□ -0.99
VMP1-205ENST00000587470 HIRAP54198 1017 aaPredicted RBP8.87□□□□□ -0.99
VMP1-205ENST00000587470 CRTC2Q53ET0 693 aaPredicted RBP8.87□□□□□ -0.99
VMP1-205ENST00000587470 FAM182BQ5T319 152 aa8.87□□□□□ -0.99
VMP1-205ENST00000587470 C1orf53Q5VUE5 145 aa8.87□□□□□ -0.99
VMP1-205ENST00000587470 POTEAQ6S8J7 498 aa8.87□□□□□ -0.99
VMP1-205ENST00000587470 LINC00114Q6XXX2 140 aa8.87□□□□□ -0.99
VMP1-205ENST00000587470 PODNQ7Z5L7 613 aa8.87□□□□□ -0.99
VMP1-205ENST00000587470 GALNT6Q8NCL4 622 aa8.87□□□□□ -0.99
VMP1-205ENST00000587470 GAS2L2Q8NHY3 880 aa8.87□□□□□ -0.99
VMP1-205ENST00000587470 ATAD2Q6PL18 1390 aa8.86□□□□□ -0.99
VMP1-205ENST00000587470 PPP1R12BO60237 982 aaPredicted RBP8.86□□□□□ -0.99
VMP1-205ENST00000587470 DPYDQ12882 1025 aa8.86□□□□□ -0.99
VMP1-205ENST00000587470 SH3PXD2AQ5TCZ1 1133 aa8.86□□□□□ -0.99
VMP1-205ENST00000587470 USP17L15C9J2P7 530 aa8.85□□□□□ -0.99
VMP1-205ENST00000587470 USP17L10C9JJH3 530 aa8.85□□□□□ -0.99
VMP1-205ENST00000587470 USP17L13C9JLJ4 530 aa8.85□□□□□ -0.99
VMP1-205ENST00000587470 USP17L12C9JPN9 530 aa8.85□□□□□ -0.99
VMP1-205ENST00000587470 USP17L11C9JVI0 530 aa8.85□□□□□ -0.99
VMP1-205ENST00000587470 USP17L21D6R901 530 aa8.85□□□□□ -0.99
VMP1-205ENST00000587470 USP17L18D6R9N7 530 aa8.85□□□□□ -0.99
VMP1-205ENST00000587470 USP17L22D6RA61 530 aa8.85□□□□□ -0.99
VMP1-205ENST00000587470 USP17L17D6RBQ6 530 aa8.85□□□□□ -0.99
VMP1-205ENST00000587470 USP17L19D6RCP7 530 aa8.85□□□□□ -0.99
VMP1-205ENST00000587470 USP17L20D6RJB6 530 aa8.85□□□□□ -0.99
VMP1-205ENST00000587470 C21orf2O43822 256 aa8.85□□□□□ -0.99
VMP1-205ENST00000587470 ARAFP10398 606 aa8.85□□□□□ -0.99
VMP1-205ENST00000587470 USP17L24Q0WX57 530 aa8.85□□□□□ -0.99
VMP1-205ENST00000587470 LAMC2Q13753 1193 aa8.85□□□□□ -0.99
VMP1-205ENST00000587470 LRRC69Q6ZNQ3 347 aa8.85□□□□□ -0.99
VMP1-205ENST00000587470 ANKMY2Q8IV38 441 aa8.85□□□□□ -0.99
VMP1-205ENST00000587470 STAG2Q8N3U4 1231 aa8.85□□□□□ -0.99
VMP1-205ENST00000587470 RHPN1Q8TCX5 695 aa8.85□□□□□ -0.99
VMP1-205ENST00000587470 EDARADDQ8WWZ3 215 aa8.85□□□□□ -0.99
VMP1-205ENST00000587470 GGA1Q9UJY5 639 aa8.85□□□□□ -0.99
VMP1-205ENST00000587470 HCN4Q9Y3Q4 1203 aa8.85□□□□□ -0.99
VMP1-205ENST00000587470 CD33P20138 364 aa8.84□□□□□ -0.99
VMP1-205ENST00000587470 CFAP70Q5T0N1 1121 aa8.84□□□□□ -0.99
VMP1-205ENST00000587470 SLCO4C1Q6ZQN7 724 aa8.84□□□□□ -0.99
VMP1-205ENST00000587470 HINFPQ9BQA5 517 aa8.84□□□□□ -0.99
VMP1-205ENST00000587470 MARK1Q9P0L2 795 aa8.84□□□□□ -0.99
VMP1-205ENST00000587470 EFSO43281 561 aa8.83□□□□□ -1
VMP1-205ENST00000587470 SCG3Q8WXD2 468 aaKnown RBP8.83□□□□□ -1
VMP1-205ENST00000587470 PHACTR1Q9C0D0 580 aa8.83□□□□□ -1
VMP1-205ENST00000587470 ZMYND15Q9H091 742 aa8.83□□□□□ -1
VMP1-205ENST00000587470 AVENQ9NQS1 362 aaPredicted RBP8.83□□□□□ -1
VMP1-205ENST00000587470 ANKIB1Q9P2G1 1089 aa8.83□□□□□ -1
VMP1-205ENST00000587470 C2orf49Q9BVC5 232 aaPredicted RBP8.82□□□□□ -1
VMP1-205ENST00000587470 SUV39H2Q9H5I1 410 aa8.82□□□□□ -1
VMP1-205ENST00000587470 KLF15Q9UIH9 416 aa8.82□□□□□ -1
VMP1-205ENST00000587470 EPXP11678 715 aa8.81□□□□□ -1
VMP1-205ENST00000587470 ALDH16A1Q8IZ83 802 aa8.81□□□□□ -1
VMP1-205ENST00000587470 CHMP7Q8WUX9 453 aaPredicted RBP8.81□□□□□ -1
VMP1-205ENST00000587470 MKL2Q9ULH7 1088 aa8.81□□□□□ -1
VMP1-205ENST00000587470 NEURL1BA8MQ27 555 aa8.8□□□□□ -1
VMP1-205ENST00000587470 ADH6P28332 368 aa8.8□□□□□ -1
VMP1-205ENST00000587470 ARXQ96QS3 562 aa8.8□□□□□ -1
VMP1-205ENST00000587470 STRN4Q9NRL3 753 aa8.8□□□□□ -1
VMP1-205ENST00000587470 PRR12Q9ULL5 1215 aa8.8□□□□□ -1
VMP1-205ENST00000587470 RFX1P22670 979 aa8.79□□□□□ -1
VMP1-205ENST00000587470 IGFBP4P22692 258 aa8.79□□□□□ -1
VMP1-205ENST00000587470 DGKGP49619 791 aa8.79□□□□□ -1
VMP1-205ENST00000587470 BTBD6Q96KE9 485 aa8.79□□□□□ -1
VMP1-205ENST00000587470 AMPD1P23109 780 aa8.78□□□□□ -1
VMP1-205ENST00000587470 CDCA8Q53HL2 280 aa8.78□□□□□ -1
VMP1-205ENST00000587470 ZNF468Q5VIY5 522 aaPredicted RBP8.78□□□□□ -1
VMP1-205ENST00000587470 FAM200AQ8TCP9 573 aa8.78□□□□□ -1
VMP1-205ENST00000587470 SUSD3Q96L08 255 aa8.78□□□□□ -1
VMP1-205ENST00000587470 RRAGCQ9HB90 399 aa8.78□□□□□ -1
VMP1-205ENST00000587470 GTF3C3Q9Y5Q9 886 aa8.78□□□□□ -1
VMP1-205ENST00000587470 BAG6P46379 1132 aa8.77□□□□□ -1.01
VMP1-205ENST00000587470 SFSWAPQ12872 951 aaKnown RBP8.77□□□□□ -1.01
VMP1-205ENST00000587470 HIF1AQ16665 826 aa8.77□□□□□ -1.01
VMP1-205ENST00000587470 XP32Q5T750 250 aa8.77□□□□□ -1.01
VMP1-205ENST00000587470 ALYREFQ86V81 257 aaKnown RBP8.77□□□□□ -1.01
VMP1-205ENST00000587470 ZNF280CQ8ND82 737 aa8.77□□□□□ -1.01
VMP1-205ENST00000587470 HSH2DQ96JZ2 352 aa8.77□□□□□ -1.01
VMP1-205ENST00000587470 CEP63Q96MT8 703 aa8.77□□□□□ -1.01
VMP1-205ENST00000587470 LGR5O75473 907 aa8.76□□□□□ -1.01
VMP1-205ENST00000587470 PCBP4P57723 403 aaKnown RBP8.76□□□□□ -1.01
VMP1-205ENST00000587470 FCHSD1Q86WN1 690 aa8.76□□□□□ -1.01
VMP1-205ENST00000587470 NGLY1Q96IV0 654 aa8.76□□□□□ -1.01
VMP1-205ENST00000587470 MDFIQ99750 246 aa8.75□□□□□ -1.01
VMP1-205ENST00000587470 BRD7Q9NPI1 651 aa8.75□□□□□ -1.01
VMP1-205ENST00000587470 WEE1P30291 646 aa8.74□□□□□ -1.01
VMP1-205ENST00000587470 KCNQ4P56696 695 aa8.74□□□□□ -1.01
VMP1-205ENST00000587470 RTN1Q16799 776 aa8.74□□□□□ -1.01
VMP1-205ENST00000587470 NOVA2Q9UNW9 492 aaKnown RBP8.74□□□□□ -1.01
VMP1-205ENST00000587470 KCNH4Q9UQ05 1017 aa8.74□□□□□ -1.01
VMP1-205ENST00000587470 PIK3R2O00459 728 aa8.73□□□□□ -1.01
VMP1-205ENST00000587470 FOXO3O43524 673 aa8.73□□□□□ -1.01
VMP1-205ENST00000587470 SIN3BO75182 1162 aa8.73□□□□□ -1.01
VMP1-205ENST00000587470 TYRO3Q06418 890 aa8.73□□□□□ -1.01
VMP1-205ENST00000587470 CHSY3Q70JA7 882 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 279.1 ms