RNA–Protein interactions for RNA: ENST00000587427.5

GHDC-207, Transcript of GH3 domain containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GHDC, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-207ENST00000587427 FLT4P35916 1363 aa19.3■□□□□ 0.68
GHDC-207ENST00000587427 MX1P20591 662 aa19.3■□□□□ 0.68
GHDC-207ENST00000587427 TPRNQ4KMQ1 711 aa19.3■□□□□ 0.68
GHDC-207ENST00000587427 LARP1Q6PKG0 1096 aaKnown RBP19.3■□□□□ 0.68
GHDC-207ENST00000587427 C17orf53Q8N3J3 647 aaPredicted RBP19.3■□□□□ 0.68
GHDC-207ENST00000587427 LRRCC1Q9C099 1032 aa19.3■□□□□ 0.68
GHDC-207ENST00000587427 LMO7Q8WWI1 1683 aa19.3■□□□□ 0.68
GHDC-207ENST00000587427 USP48Q86UV5 1035 aa19.29■□□□□ 0.68
GHDC-207ENST00000587427 ANKRD24Q8TF21 1146 aa19.29■□□□□ 0.68
GHDC-207ENST00000587427 PRIMPOLQ96LW4 560 aa19.29■□□□□ 0.68
GHDC-207ENST00000587427 ANO2Q9NQ90 1003 aa19.29■□□□□ 0.68
GHDC-207ENST00000587427 STAP2Q9UGK3 403 aa19.29■□□□□ 0.68
GHDC-207ENST00000587427 USP21Q9UK80 565 aa19.29■□□□□ 0.68
GHDC-207ENST00000587427 BCL9LQ86UU0 1499 aa19.29■□□□□ 0.68
GHDC-207ENST00000587427 USHBP1Q8N6Y0 703 aa19.29■□□□□ 0.68
GHDC-207ENST00000587427 PIBF1Q8WXW3 757 aa19.29■□□□□ 0.68
GHDC-207ENST00000587427 CCDC94Q9BW85 323 aaPredicted RBP19.29■□□□□ 0.68
GHDC-207ENST00000587427 EVA1CP58658 441 aa19.28■□□□□ 0.68
GHDC-207ENST00000587427 USP25Q9UHP3 1055 aa19.28■□□□□ 0.68
GHDC-207ENST00000587427 EXOC6BQ9Y2D4 811 aa19.28■□□□□ 0.68
GHDC-207ENST00000587427 COL14A1Q05707 1796 aaKnown RBP19.28■□□□□ 0.68
GHDC-207ENST00000587427 CSB-PGBD3P0DP91 1061 aa19.28■□□□□ 0.68
GHDC-207ENST00000587427 FNBP4Q8N3X1 1017 aaPredicted RBP19.28■□□□□ 0.68
GHDC-207ENST00000587427 SRCIN1Q9C0H9 1055 aa19.28■□□□□ 0.68
GHDC-207ENST00000587427 TTC12Q9H892 705 aaPredicted RBP19.28■□□□□ 0.68
GHDC-207ENST00000587427 SLIT2O94813 1529 aa19.28■□□□□ 0.68
GHDC-207ENST00000587427 COL5A2P05997 1499 aaPredicted RBP19.28■□□□□ 0.68
GHDC-207ENST00000587427 TUBGCP6Q96RT7 1819 aa19.27■□□□□ 0.68
GHDC-207ENST00000587427 ERBB3P21860 1342 aa19.27■□□□□ 0.68
GHDC-207ENST00000587427 FAM177BA6PVY3 158 aa19.27■□□□□ 0.68
GHDC-207ENST00000587427 NOLC1Q14978 699 aaKnown RBP eCLIP19.27■□□□□ 0.68
GHDC-207ENST00000587427 CCDC183Q5T5S1 534 aa19.27■□□□□ 0.68
GHDC-207ENST00000587427 SLC4A10Q6U841 1118 aa19.27■□□□□ 0.68
GHDC-207ENST00000587427 LETM1O95202 739 aaPredicted RBP19.27■□□□□ 0.67
GHDC-207ENST00000587427 G2E3Q7L622 706 aa19.27■□□□□ 0.67
GHDC-207ENST00000587427 ZNF710Q8N1W2 664 aa19.27■□□□□ 0.67
GHDC-207ENST00000587427 KLHL34Q8N239 644 aa19.27■□□□□ 0.67
GHDC-207ENST00000587427 UPF3BQ9BZI7 483 aaKnown RBP19.27■□□□□ 0.67
GHDC-207ENST00000587427 RGS17Q9UGC6 210 aaPredicted RBP19.27■□□□□ 0.67
GHDC-207ENST00000587427 AOX1Q06278 1338 aa19.26■□□□□ 0.67
GHDC-207ENST00000587427 F6X3S4 739 aa19.26■□□□□ 0.67
GHDC-207ENST00000587427 HMGN5P82970 282 aaKnown RBP19.26■□□□□ 0.67
GHDC-207ENST00000587427 GTF2F1P35269 517 aaKnown RBP eCLIP19.26■□□□□ 0.67
GHDC-207ENST00000587427 ZHX1Q9UKY1 873 aaPredicted RBP19.26■□□□□ 0.67
GHDC-207ENST00000587427 CCDC9Q9Y3X0 531 aaKnown RBP19.26■□□□□ 0.67
GHDC-207ENST00000587427 RPAP1Q9BWH6 1393 aaPredicted RBP19.25■□□□□ 0.67
GHDC-207ENST00000587427 UNC5CLQ8IV45 518 aa19.25■□□□□ 0.67
GHDC-207ENST00000587427 RGPD2P0DJD1 1756 aa19.25■□□□□ 0.67
GHDC-207ENST00000587427 TRIM6-TRIM34B2RNG4 842 aa19.25■□□□□ 0.67
GHDC-207ENST00000587427 ATP8B2P98198 1209 aa19.25■□□□□ 0.67
GHDC-207ENST00000587427 NBPF6Q5VWK0 638 aa19.25■□□□□ 0.67
GHDC-207ENST00000587427 RILPL2Q969X0 211 aa19.25■□□□□ 0.67
GHDC-207ENST00000587427 NBPF4Q96M43 638 aa19.25■□□□□ 0.67
GHDC-207ENST00000587427 ADCY5O95622 1261 aa19.24■□□□□ 0.67
GHDC-207ENST00000587427 GNAI3P08754 354 aa19.24■□□□□ 0.67
GHDC-207ENST00000587427 HSPA4P34932 840 aa19.24■□□□□ 0.67
GHDC-207ENST00000587427 TOM1L2Q6ZVM7 507 aa19.24■□□□□ 0.67
GHDC-207ENST00000587427 NLRP2Q9NX02 1062 aa19.24■□□□□ 0.67
GHDC-207ENST00000587427 EP400Q96L91 3159 aa19.24■□□□□ 0.67
GHDC-207ENST00000587427 SPTLC3Q9NUV7 552 aa19.24■□□□□ 0.67
GHDC-207ENST00000587427 NRAPQ86VF7 1730 aa19.22■□□□□ 0.67
GHDC-207ENST00000587427 HCLS1P14317 486 aaPredicted RBP19.22■□□□□ 0.67
GHDC-207ENST00000587427 EYA1Q99502 592 aa19.22■□□□□ 0.67
GHDC-207ENST00000587427 MIS18AQ9NYP9 233 aa19.22■□□□□ 0.67
GHDC-207ENST00000587427 PNMA6EA0A0J9YXQ4 647 aa19.21■□□□□ 0.67
GHDC-207ENST00000587427 ZSCAN20P17040 1043 aaPredicted RBP19.21■□□□□ 0.67
GHDC-207ENST00000587427 TSPYL4Q9UJ04 414 aa19.21■□□□□ 0.67
GHDC-207ENST00000587427 WDR17Q8IZU2 1322 aa19.21■□□□□ 0.67
GHDC-207ENST00000587427 UBE2HP62256 183 aa19.21■□□□□ 0.67
GHDC-207ENST00000587427 CBX1P83916 185 aa19.21■□□□□ 0.67
GHDC-207ENST00000587427 QTRT2Q9H974 415 aaKnown RBP19.21■□□□□ 0.67
GHDC-207ENST00000587427 ZSCAN22P10073 491 aaPredicted RBP19.2■□□□□ 0.66
GHDC-207ENST00000587427 CNPY2Q9Y2B0 182 aa19.2■□□□□ 0.66
GHDC-207ENST00000587427 RGPD1P0DJD0 1748 aa19.2■□□□□ 0.66
GHDC-207ENST00000587427 FKBP5Q13451 457 aaPredicted RBP19.2■□□□□ 0.66
GHDC-207ENST00000587427 POTEAQ6S8J7 498 aa19.19■□□□□ 0.66
GHDC-207ENST00000587427 STK31Q9BXU1 1019 aa19.19■□□□□ 0.66
GHDC-207ENST00000587427 NWD2Q9ULI1 1742 aa19.19■□□□□ 0.66
GHDC-207ENST00000587427 KDM4AO75164 1064 aa19.19■□□□□ 0.66
GHDC-207ENST00000587427 PLCB2Q00722 1185 aa19.19■□□□□ 0.66
GHDC-207ENST00000587427 DMTNQ08495 405 aa19.19■□□□□ 0.66
GHDC-207ENST00000587427 IL25Q9H293 177 aa19.19■□□□□ 0.66
GHDC-207ENST00000587427 TCHHQ07283 1943 aa19.18■□□□□ 0.66
GHDC-207ENST00000587427 RTF1Q92541 710 aaKnown RBP19.18■□□□□ 0.66
GHDC-207ENST00000587427 TTC14Q96N46 770 aa19.18■□□□□ 0.66
GHDC-207ENST00000587427 LARP6Q9BRS8 491 aaKnown RBP19.18■□□□□ 0.66
GHDC-207ENST00000587427 KIF3AQ9Y496 699 aa19.18■□□□□ 0.66
GHDC-207ENST00000587427 FLIIQ13045 1269 aa19.17■□□□□ 0.66
GHDC-207ENST00000587427 ATP2B3Q16720 1220 aa19.17■□□□□ 0.66
GHDC-207ENST00000587427 PPP4R3BQ5MIZ7 849 aa19.17■□□□□ 0.66
GHDC-207ENST00000587427 FUCA2Q9BTY2 467 aa19.17■□□□□ 0.66
GHDC-207ENST00000587427 RAD50Q92878 1312 aa19.17■□□□□ 0.66
GHDC-207ENST00000587427 FAM98CQ17RN3 349 aaKnown RBP19.17■□□□□ 0.66
GHDC-207ENST00000587427 ATP6V1DQ9Y5K8 247 aa19.17■□□□□ 0.66
GHDC-207ENST00000587427 SPATA31A1Q5TZJ5 1347 aa19.16■□□□□ 0.66
GHDC-207ENST00000587427 SPATA31A5Q5VU36 1347 aa19.16■□□□□ 0.66
GHDC-207ENST00000587427 SPATA31A7Q8IWB4 1347 aa19.16■□□□□ 0.66
GHDC-207ENST00000587427 STX6O43752 255 aa19.16■□□□□ 0.66
GHDC-207ENST00000587427 VPS72Q15906 364 aa19.16■□□□□ 0.66
GHDC-207ENST00000587427 UTP14CQ5TAP6 766 aaKnown RBP19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms