RNA–Protein interactions for RNA: ENST00000587171.1

H3F3B-205, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-205ENST00000587171 RUNDC1Q96C34 613 aa17.33■□□□□ 0.36
H3F3B-205ENST00000587171 BABAM1Q9NWV8 329 aa17.33■□□□□ 0.36
H3F3B-205ENST00000587171 CACNA1SQ13698 1873 aa17.33■□□□□ 0.36
H3F3B-205ENST00000587171 ARFGEF2Q9Y6D5 1785 aa17.33■□□□□ 0.36
H3F3B-205ENST00000587171 C9orf131Q5VYM1 1079 aa17.32■□□□□ 0.36
H3F3B-205ENST00000587171 CCDC24Q8N4L8 307 aa17.32■□□□□ 0.36
H3F3B-205ENST00000587171 ADAMTS8Q9UP79 889 aa17.32■□□□□ 0.36
H3F3B-205ENST00000587171 RRP7AQ9Y3A4 280 aaKnown RBP17.32■□□□□ 0.36
H3F3B-205ENST00000587171 ST5P78524 1137 aa17.31■□□□□ 0.36
H3F3B-205ENST00000587171 ERBB4Q15303 1308 aa17.3■□□□□ 0.36
H3F3B-205ENST00000587171 NPHP1O15259 732 aa17.3■□□□□ 0.36
H3F3B-205ENST00000587171 NEUROD2Q15784 382 aa17.3■□□□□ 0.36
H3F3B-205ENST00000587171 HLFQ16534 295 aa17.3■□□□□ 0.36
H3F3B-205ENST00000587171 NBPF5PQ86XG9 351 aaPredicted RBP17.3■□□□□ 0.36
H3F3B-205ENST00000587171 NIP7Q9Y221 180 aaKnown RBP eCLIP17.3■□□□□ 0.36
H3F3B-205ENST00000587171 FER1L6Q2WGJ9 1857 aa17.3■□□□□ 0.36
H3F3B-205ENST00000587171 SLX4Q8IY92 1834 aa17.3■□□□□ 0.36
H3F3B-205ENST00000587171 RNF181Q9P0P0 153 aa17.29■□□□□ 0.36
H3F3B-205ENST00000587171 TRIM35Q9UPQ4 493 aa17.29■□□□□ 0.36
H3F3B-205ENST00000587171 MAP3K15Q6ZN16 1313 aa17.28■□□□□ 0.36
H3F3B-205ENST00000587171 ERVV-1B6SEH8 477 aa17.28■□□□□ 0.36
H3F3B-205ENST00000587171 KIF3CO14782 793 aa17.28■□□□□ 0.36
H3F3B-205ENST00000587171 SRGNP10124 158 aa17.28■□□□□ 0.36
H3F3B-205ENST00000587171 RASSF7Q02833 373 aa17.28■□□□□ 0.36
H3F3B-205ENST00000587171 NGEFQ8N5V2 710 aa17.28■□□□□ 0.36
H3F3B-205ENST00000587171 ZNF622Q969S3 477 aaKnown RBP eCLIP17.28■□□□□ 0.364e-13■□□□□ 10.8
H3F3B-205ENST00000587171 DICER1Q9UPY3 1922 aaKnown RBP17.27■□□□□ 0.36
H3F3B-205ENST00000587171 SENP3-EIF4A1A0A087X0R7 540 aa17.27■□□□□ 0.36
H3F3B-205ENST00000587171 CHL1O00533 1208 aa17.27■□□□□ 0.36
H3F3B-205ENST00000587171 MYL6BP14649 208 aa17.27■□□□□ 0.36
H3F3B-205ENST00000587171 TPTE2Q6XPS3 522 aa17.27■□□□□ 0.36
H3F3B-205ENST00000587171 TTLL7Q6ZT98 887 aa17.27■□□□□ 0.36
H3F3B-205ENST00000587171 TIAM2Q8IVF5 1701 aa17.27■□□□□ 0.35
H3F3B-205ENST00000587171 NFKBIEO00221 500 aa17.26■□□□□ 0.35
H3F3B-205ENST00000587171 PDIA6Q15084 440 aa17.26■□□□□ 0.35
H3F3B-205ENST00000587171 STYK1Q6J9G0 422 aa17.26■□□□□ 0.35
H3F3B-205ENST00000587171 KIF6Q6ZMV9 814 aa17.26■□□□□ 0.35
H3F3B-205ENST00000587171 LRP10Q7Z4F1 713 aa17.26■□□□□ 0.35
H3F3B-205ENST00000587171 MASTLQ96GX5 879 aa17.26■□□□□ 0.35
H3F3B-205ENST00000587171 ZC3H4Q9UPT8 1303 aaKnown RBP17.25■□□□□ 0.35
H3F3B-205ENST00000587171 KLRG2A4D1S0 409 aaPredicted RBP17.25■□□□□ 0.35
H3F3B-205ENST00000587171 LMNB1P20700 586 aa17.25■□□□□ 0.35
H3F3B-205ENST00000587171 PRELPP51888 382 aa17.25■□□□□ 0.35
H3F3B-205ENST00000587171 CNKSR1Q969H4 720 aa17.25■□□□□ 0.35
H3F3B-205ENST00000587171 TNRC6CQ9HCJ0 1690 aaKnown RBP17.25■□□□□ 0.35
H3F3B-205ENST00000587171 C21orf2O43822 256 aa17.24■□□□□ 0.35
H3F3B-205ENST00000587171 EIF2S2P20042 333 aaKnown RBP17.24■□□□□ 0.35
H3F3B-205ENST00000587171 ZBTB3Q9H5J0 574 aa17.24■□□□□ 0.35
H3F3B-205ENST00000587171 IBTKQ9P2D0 1353 aaPredicted RBP17.24■□□□□ 0.35
H3F3B-205ENST00000587171 ANKRD36CQ5JPF3 1778 aa17.23■□□□□ 0.35
H3F3B-205ENST00000587171 FAM177BA6PVY3 158 aa17.23■□□□□ 0.35
H3F3B-205ENST00000587171 PROSER3Q2NL68 480 aa17.23■□□□□ 0.35
H3F3B-205ENST00000587171 PRPF40BQ6NWY9 871 aaKnown RBP17.23■□□□□ 0.35
H3F3B-205ENST00000587171 NMRK2Q9NPI5 230 aa17.23■□□□□ 0.35
H3F3B-205ENST00000587171 UBN2Q6ZU65 1347 aa17.22■□□□□ 0.35
H3F3B-205ENST00000587171 KRT24Q2M2I5 525 aa17.22■□□□□ 0.35
H3F3B-205ENST00000587171 GIGYF2Q6Y7W6 1299 aaKnown RBP17.22■□□□□ 0.35
H3F3B-205ENST00000587171 NYXQ9GZU5 481 aa17.22■□□□□ 0.35
H3F3B-205ENST00000587171 ABCC12Q96J65 1359 aa17.22■□□□□ 0.35
H3F3B-205ENST00000587171 KDM2BQ8NHM5 1336 aa17.21■□□□□ 0.35
H3F3B-205ENST00000587171 RIC1Q4ADV7 1423 aa17.21■□□□□ 0.35
H3F3B-205ENST00000587171 APAF1O14727 1248 aa17.21■□□□□ 0.35
H3F3B-205ENST00000587171 ANXA1P04083 346 aa17.21■□□□□ 0.35
H3F3B-205ENST00000587171 NPR1P16066 1061 aa17.21■□□□□ 0.35
H3F3B-205ENST00000587171 ZNF34Q8IZ26 560 aa17.21■□□□□ 0.35
H3F3B-205ENST00000587171 CFAP44Q96MT7 982 aa17.21■□□□□ 0.35
H3F3B-205ENST00000587171 ZNF219Q9P2Y4 722 aaPredicted RBP17.21■□□□□ 0.35
H3F3B-205ENST00000587171 LAS1LQ9Y4W2 734 aaKnown RBP17.21■□□□□ 0.35
H3F3B-205ENST00000587171 LTBP3Q9NS15 1303 aa17.21■□□□□ 0.34
H3F3B-205ENST00000587171 HOXB7P09629 217 aa17.2■□□□□ 0.34
H3F3B-205ENST00000587171 GPTP24298 496 aa17.2■□□□□ 0.34
H3F3B-205ENST00000587171 GTF2E1P29083 439 aaPredicted RBP17.2■□□□□ 0.34
H3F3B-205ENST00000587171 SOGA3Q5TF21 947 aa17.2■□□□□ 0.34
H3F3B-205ENST00000587171 C7orf43Q8WVR3 580 aa17.2■□□□□ 0.34
H3F3B-205ENST00000587171 TOMM70O94826 608 aa17.19■□□□□ 0.34
H3F3B-205ENST00000587171 CRY2Q49AN0 593 aa17.19■□□□□ 0.34
H3F3B-205ENST00000587171 NUTM1Q86Y26 1132 aa17.19■□□□□ 0.34
H3F3B-205ENST00000587171 NECTIN2Q92692 538 aa17.19■□□□□ 0.34
H3F3B-205ENST00000587171 DDX21Q9NR30 783 aaKnown RBP eCLIP17.19■□□□□ 0.34
H3F3B-205ENST00000587171 ZNF316A6NFI3 1004 aaPredicted RBP17.18■□□□□ 0.34
H3F3B-205ENST00000587171 NTSR2O95665 410 aa17.18■□□□□ 0.34
H3F3B-205ENST00000587171 ZNF853P0CG23 659 aa17.18■□□□□ 0.34
H3F3B-205ENST00000587171 ERFEQ4G0M1 354 aa17.18■□□□□ 0.34
H3F3B-205ENST00000587171 CCDC184Q52MB2 194 aa17.18■□□□□ 0.34
H3F3B-205ENST00000587171 SUSD4Q5VX71 490 aa17.18■□□□□ 0.34
H3F3B-205ENST00000587171 TAOK3Q9H2K8 898 aa17.18■□□□□ 0.34
H3F3B-205ENST00000587171 HSPA6P17066 643 aa17.17■□□□□ 0.34
H3F3B-205ENST00000587171 PARP10Q53GL7 1025 aa17.17■□□□□ 0.34
H3F3B-205ENST00000587171 COPS6Q7L5N1 327 aa17.17■□□□□ 0.34
H3F3B-205ENST00000587171 XAGE3Q8WTP9 111 aa17.17■□□□□ 0.34
H3F3B-205ENST00000587171 MBIPQ9NS73 344 aa17.17■□□□□ 0.34
H3F3B-205ENST00000587171 GLTPD2A6NH11 291 aa17.16■□□□□ 0.34
H3F3B-205ENST00000587171 ALDH1B1P30837 517 aa17.16■□□□□ 0.34
H3F3B-205ENST00000587171 CCDC93Q567U6 631 aa17.16■□□□□ 0.34
H3F3B-205ENST00000587171 HDGFL1Q5TGJ6 251 aa17.16■□□□□ 0.34
H3F3B-205ENST00000587171 IFT57Q9NWB7 429 aa17.16■□□□□ 0.34
H3F3B-205ENST00000587171 CHPF2Q9P2E5 772 aa17.16■□□□□ 0.34
H3F3B-205ENST00000587171 CALD1Q05682 793 aaKnown RBP17.15■□□□□ 0.34
H3F3B-205ENST00000587171 AIMP1Q12904 312 aaKnown RBP17.15■□□□□ 0.34
H3F3B-205ENST00000587171 DUSP27Q5VZP5 1158 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms