RNA–Protein interactions for RNA: ENST00000585920.1

DNMT1-205, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-205ENST00000585920 DBF4Q9UBU7 674 aaPredicted RBP16.85■□□□□ 0.29
DNMT1-205ENST00000585920 RGL2O15211 777 aa16.84■□□□□ 0.29
DNMT1-205ENST00000585920 ZPR1O75312 459 aa16.84■□□□□ 0.29
DNMT1-205ENST00000585920 VAMP4O75379 141 aa16.84■□□□□ 0.29
DNMT1-205ENST00000585920 DDX21Q9NR30 783 aaKnown RBP eCLIP16.84■□□□□ 0.29
DNMT1-205ENST00000585920 CHPF2Q9P2E5 772 aa16.84■□□□□ 0.29
DNMT1-205ENST00000585920 COL5A3P25940 1745 aaPredicted RBP16.84■□□□□ 0.29
DNMT1-205ENST00000585920 COL15A1P39059 1388 aa16.83■□□□□ 0.28
DNMT1-205ENST00000585920 PDIA6Q15084 440 aa16.83■□□□□ 0.28
DNMT1-205ENST00000585920 STK31Q9BXU1 1019 aa16.83■□□□□ 0.28
DNMT1-205ENST00000585920 TBC1D2BQ9UPU7 963 aa16.83■□□□□ 0.28
DNMT1-205ENST00000585920 ZBTB7AO95365 584 aa16.82■□□□□ 0.28
DNMT1-205ENST00000585920 ANXA1P04083 346 aa16.82■□□□□ 0.28
DNMT1-205ENST00000585920 PROSER3Q2NL68 480 aa16.82■□□□□ 0.28
DNMT1-205ENST00000585920 DZIP3Q86Y13 1208 aaKnown RBP16.82■□□□□ 0.28
DNMT1-205ENST00000585920 MTFR1LQ9H019 292 aa16.82■□□□□ 0.28
DNMT1-205ENST00000585920 HYPKQ9NX55 129 aa16.82■□□□□ 0.28
DNMT1-205ENST00000585920 NARFQ9UHQ1 456 aa16.82■□□□□ 0.28
DNMT1-205ENST00000585920 CIZ1Q9ULV3 898 aaPredicted RBP16.82■□□□□ 0.28
DNMT1-205ENST00000585920 TCERG1O14776 1098 aaKnown RBP16.81■□□□□ 0.28
DNMT1-205ENST00000585920 SRP68Q9UHB9 627 aaKnown RBP16.81■□□□□ 0.28
DNMT1-205ENST00000585920 MYH14Q7Z406 1995 aaKnown RBP16.8■□□□□ 0.28
DNMT1-205ENST00000585920 AIMP1Q12904 312 aaKnown RBP16.8■□□□□ 0.28
DNMT1-205ENST00000585920 USPL1Q5W0Q7 1092 aa16.8■□□□□ 0.28
DNMT1-205ENST00000585920 KIF6Q6ZMV9 814 aa16.8■□□□□ 0.28
DNMT1-205ENST00000585920 COPS6Q7L5N1 327 aa16.8■□□□□ 0.28
DNMT1-205ENST00000585920 NLGN1Q8N2Q7 840 aa16.8■□□□□ 0.28
DNMT1-205ENST00000585920 SPDYE1Q8NFV5 336 aaPredicted RBP16.8■□□□□ 0.28
DNMT1-205ENST00000585920 USP42Q9H9J4 1324 aaKnown RBP16.79■□□□□ 0.28
DNMT1-205ENST00000585920 GYS1P13807 737 aa16.79■□□□□ 0.28
DNMT1-205ENST00000585920 MSL1Q68DK7 614 aa16.79■□□□□ 0.28
DNMT1-205ENST00000585920 XAGE3Q8WTP9 111 aa16.79■□□□□ 0.28
DNMT1-205ENST00000585920 SPON1Q9HCB6 807 aa16.79■□□□□ 0.28
DNMT1-205ENST00000585920 CT47B1P0C2W7 299 aaPredicted RBP16.78■□□□□ 0.28
DNMT1-205ENST00000585920 TTLL7Q6ZT98 887 aa16.78■□□□□ 0.28
DNMT1-205ENST00000585920 LRP10Q7Z4F1 713 aa16.78■□□□□ 0.28
DNMT1-205ENST00000585920 UBR3Q6ZT12 1888 aa16.78■□□□□ 0.28
DNMT1-205ENST00000585920 LAMB4A4D0S4 1761 aa16.77■□□□□ 0.28
DNMT1-205ENST00000585920 CAMTA2O94983 1202 aa16.77■□□□□ 0.28
DNMT1-205ENST00000585920 POLD1P28340 1107 aa16.77■□□□□ 0.28
DNMT1-205ENST00000585920 ZNF428Q96B54 188 aa16.77■□□□□ 0.28
DNMT1-205ENST00000585920 PHAXQ9H814 394 aaKnown RBP16.77■□□□□ 0.28
DNMT1-205ENST00000585920 ZNF652Q9Y2D9 606 aa16.77■□□□□ 0.28
DNMT1-205ENST00000585920 ERVV-1B6SEH8 477 aa16.76■□□□□ 0.27
DNMT1-205ENST00000585920 ZBTB3Q9H5J0 574 aa16.76■□□□□ 0.27
DNMT1-205ENST00000585920 BCL2L12Q9HB09 334 aa16.76■□□□□ 0.27
DNMT1-205ENST00000585920 MAP3K15Q6ZN16 1313 aa16.75■□□□□ 0.27
DNMT1-205ENST00000585920 CLEC4GQ6UXB4 293 aa16.75■□□□□ 0.27
DNMT1-205ENST00000585920 ANKRD13DQ6ZTN6 518 aa16.75■□□□□ 0.27
DNMT1-205ENST00000585920 QSER1Q2KHR3 1735 aa16.75■□□□□ 0.27
DNMT1-205ENST00000585920 DDX58O95786 925 aaKnown RBP16.74■□□□□ 0.27
DNMT1-205ENST00000585920 HLFQ16534 295 aa16.74■□□□□ 0.27
DNMT1-205ENST00000585920 CLEC11AQ9Y240 323 aa16.74■□□□□ 0.27
DNMT1-205ENST00000585920 TUBGCP6Q96RT7 1819 aa16.74■□□□□ 0.27
DNMT1-205ENST00000585920 MMP10P09238 476 aa16.73■□□□□ 0.27
DNMT1-205ENST00000585920 ALDH1L2Q3SY69 923 aa16.73■□□□□ 0.27
DNMT1-205ENST00000585920 BICDL1Q6ZP65 573 aa16.73■□□□□ 0.27
DNMT1-205ENST00000585920 G2E3Q7L622 706 aa16.73■□□□□ 0.27
DNMT1-205ENST00000585920 RIC3Q7Z5B4 369 aa16.73■□□□□ 0.27
DNMT1-205ENST00000585920 REM2Q8IYK8 340 aaPredicted RBP16.73■□□□□ 0.27
DNMT1-205ENST00000585920 PLBD2Q8NHP8 589 aa16.73■□□□□ 0.27
DNMT1-205ENST00000585920 SSH1Q8WYL5 1049 aa16.73■□□□□ 0.27
DNMT1-205ENST00000585920 TM4SF1P30408 202 aa16.72■□□□□ 0.27
DNMT1-205ENST00000585920 TBC1D9BQ66K14 1250 aa16.72■□□□□ 0.27
DNMT1-205ENST00000585920 GIGYF2Q6Y7W6 1299 aaKnown RBP16.72■□□□□ 0.27
DNMT1-205ENST00000585920 MRPL50Q8N5N7 158 aaKnown RBP16.72■□□□□ 0.27
DNMT1-205ENST00000585920 SETDB2Q96T68 719 aa16.72■□□□□ 0.27
DNMT1-205ENST00000585920 SMC4Q9NTJ3 1288 aa16.72■□□□□ 0.27
DNMT1-205ENST00000585920 PARP3Q9Y6F1 533 aa16.72■□□□□ 0.27
DNMT1-205ENST00000585920 CASZ1Q86V15 1759 aa16.72■□□□□ 0.27
DNMT1-205ENST00000585920 PTGER2P43116 358 aa16.71■□□□□ 0.27
DNMT1-205ENST00000585920 FLIIQ13045 1269 aa16.71■□□□□ 0.27
DNMT1-205ENST00000585920 NFIXQ14938 502 aa16.71■□□□□ 0.27
DNMT1-205ENST00000585920 HSP90AB3PQ58FF7 597 aa16.71■□□□□ 0.27
DNMT1-205ENST00000585920 BCL2L13Q9BXK5 485 aa16.71■□□□□ 0.27
DNMT1-205ENST00000585920 RARSP54136 660 aaKnown RBP16.7■□□□□ 0.26
DNMT1-205ENST00000585920 FKBP5Q13451 457 aaPredicted RBP16.7■□□□□ 0.26
DNMT1-205ENST00000585920 KSR2Q6VAB6 950 aa16.7■□□□□ 0.26
DNMT1-205ENST00000585920 BBXQ8WY36 941 aaPredicted RBP16.7■□□□□ 0.26
DNMT1-205ENST00000585920 SGIP1Q9BQI5 828 aa16.7■□□□□ 0.26
DNMT1-205ENST00000585920 PPP1R1BQ9UD71 204 aaPredicted RBP16.7■□□□□ 0.26
DNMT1-205ENST00000585920 NIP7Q9Y221 180 aaKnown RBP eCLIP16.7■□□□□ 0.26
DNMT1-205ENST00000585920 PI4KAP2A4QPH2 592 aa16.69■□□□□ 0.26
DNMT1-205ENST00000585920 TCIRG1Q13488 830 aa16.69■□□□□ 0.26
DNMT1-205ENST00000585920 PI4KAP1Q8N8J0 262 aa16.69■□□□□ 0.26
DNMT1-205ENST00000585920 SERPINB2P05120 415 aa16.68■□□□□ 0.26
DNMT1-205ENST00000585920 GPTP24298 496 aa16.68■□□□□ 0.26
DNMT1-205ENST00000585920 MAP3K2Q9Y2U5 619 aa16.68■□□□□ 0.26
DNMT1-205ENST00000585920 C4AP0C0L4 1744 aa16.67■□□□□ 0.26
DNMT1-205ENST00000585920 POLRMTO00411 1230 aaKnown RBP16.67■□□□□ 0.26
DNMT1-205ENST00000585920 NPHP1O15259 732 aa16.67■□□□□ 0.26
DNMT1-205ENST00000585920 DDR1Q08345 913 aa16.67■□□□□ 0.26
DNMT1-205ENST00000585920 ZNF34Q8IZ26 560 aa16.67■□□□□ 0.26
DNMT1-205ENST00000585920 CREBZFQ9NS37 354 aa16.67■□□□□ 0.26
DNMT1-205ENST00000585920 FAM177BA6PVY3 158 aa16.66■□□□□ 0.26
DNMT1-205ENST00000585920 PRR29P0C7W0 189 aa16.66■□□□□ 0.26
DNMT1-205ENST00000585920 NUBP1P53384 320 aa16.66■□□□□ 0.26
DNMT1-205ENST00000585920 NEXNQ0ZGT2 675 aa16.66■□□□□ 0.26
DNMT1-205ENST00000585920 PARP10Q53GL7 1025 aa16.66■□□□□ 0.26
DNMT1-205ENST00000585920 MYD88Q99836 296 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms