RNA–Protein interactions for RNA: ENST00000585421.5

TIMP2-203, Transcript of TIMP metallopeptidase inhibitor 2, humanhuman

TSL 3 BASIC

Gene TIMP2, Length 3,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP2-203ENST00000585421 PIGBQ92521 554 aa11.78□□□□□ -0.52
TIMP2-203ENST00000585421 BABAM1Q9NWV8 329 aa11.78□□□□□ -0.52
TIMP2-203ENST00000585421 SHANK3Q9BYB0 1731 aa11.78□□□□□ -0.52
TIMP2-203ENST00000585421 SLIT2O94813 1529 aa11.78□□□□□ -0.52
TIMP2-203ENST00000585421 DISP2A7MBM2 1401 aa11.78□□□□□ -0.52
TIMP2-203ENST00000585421 BCL9LQ86UU0 1499 aa11.78□□□□□ -0.52
TIMP2-203ENST00000585421 PRIM1P49642 420 aaKnown RBP11.78□□□□□ -0.52
TIMP2-203ENST00000585421 ZBTB40Q9NUA8 1239 aa11.78□□□□□ -0.52
TIMP2-203ENST00000585421 ZBTB7BO15156 539 aaPredicted RBP11.78□□□□□ -0.52
TIMP2-203ENST00000585421 ARHGAP45Q92619 1136 aa11.78□□□□□ -0.52
TIMP2-203ENST00000585421 RBM42Q9BTD8 480 aaKnown RBP11.78□□□□□ -0.52
TIMP2-203ENST00000585421 PI4KAP2A4QPH2 592 aa11.77□□□□□ -0.52
TIMP2-203ENST00000585421 PI4KAP1Q8N8J0 262 aa11.77□□□□□ -0.52
TIMP2-203ENST00000585421 MARCH10Q8NA82 808 aaPredicted RBP11.77□□□□□ -0.52
TIMP2-203ENST00000585421 CHMP5Q9NZZ3 219 aa11.77□□□□□ -0.52
TIMP2-203ENST00000585421 NASPP49321 788 aaPredicted RBP11.77□□□□□ -0.53
TIMP2-203ENST00000585421 TAF3Q5VWG9 929 aa11.77□□□□□ -0.53
TIMP2-203ENST00000585421 DHX37Q8IY37 1157 aaKnown RBP11.76□□□□□ -0.53
TIMP2-203ENST00000585421 FMNL2Q96PY5 1086 aa11.76□□□□□ -0.53
TIMP2-203ENST00000585421 AFF2P51816 1311 aa11.76□□□□□ -0.53
TIMP2-203ENST00000585421 SIPA1L3O60292 1781 aaPredicted RBP11.76□□□□□ -0.53
TIMP2-203ENST00000585421 KCNQ2O43526 872 aa11.76□□□□□ -0.53
TIMP2-203ENST00000585421 PTF1AQ7RTS3 328 aa11.76□□□□□ -0.53
TIMP2-203ENST00000585421 NRAPQ86VF7 1730 aa11.76□□□□□ -0.53
TIMP2-203ENST00000585421 NKX1-1Q15270 411 aaPredicted RBP11.76□□□□□ -0.53
TIMP2-203ENST00000585421 CHMP4AQ9BY43 222 aa11.76□□□□□ -0.53
TIMP2-203ENST00000585421 PTPRCP08575 1304 aa11.76□□□□□ -0.53
TIMP2-203ENST00000585421 ADAMTS7Q9UKP4 1686 aa11.75□□□□□ -0.53
TIMP2-203ENST00000585421 TOGARAM1Q9Y4F4 1720 aa11.75□□□□□ -0.53
TIMP2-203ENST00000585421 A1BGP04217 495 aa11.75□□□□□ -0.53
TIMP2-203ENST00000585421 DBF4Q9UBU7 674 aaPredicted RBP11.75□□□□□ -0.53
TIMP2-203ENST00000585421 ERVV-2B6SEH9 535 aa11.75□□□□□ -0.53
TIMP2-203ENST00000585421 KCNQ4P56696 695 aa11.75□□□□□ -0.53
TIMP2-203ENST00000585421 PDIA6Q15084 440 aa11.75□□□□□ -0.53
TIMP2-203ENST00000585421 PPP1R9BQ96SB3 815 aa11.75□□□□□ -0.53
TIMP2-203ENST00000585421 HEG1Q9ULI3 1381 aa11.75□□□□□ -0.53
TIMP2-203ENST00000585421 APBB1O00213 710 aa11.75□□□□□ -0.53
TIMP2-203ENST00000585421 SNRPA1P09661 255 aaKnown RBP11.75□□□□□ -0.53
TIMP2-203ENST00000585421 BRD2P25440 801 aaKnown RBP11.75□□□□□ -0.53
TIMP2-203ENST00000585421 C5P01031 1676 aa11.74□□□□□ -0.53
TIMP2-203ENST00000585421 TEX2Q8IWB9 1127 aa11.74□□□□□ -0.53
TIMP2-203ENST00000585421 SECISBP2LQ93073 1101 aaKnown RBP11.74□□□□□ -0.53
TIMP2-203ENST00000585421 SPATA31A6Q5VVP1 1343 aa11.74□□□□□ -0.53
TIMP2-203ENST00000585421 MRC1P22897 1456 aa11.74□□□□□ -0.53
TIMP2-203ENST00000585421 INTS3Q68E01 1043 aaKnown RBP11.74□□□□□ -0.53
TIMP2-203ENST00000585421 FNBP4Q8N3X1 1017 aaPredicted RBP11.74□□□□□ -0.53
TIMP2-203ENST00000585421 XAGE3Q8WTP9 111 aa11.74□□□□□ -0.53
TIMP2-203ENST00000585421 ATG3Q9NT62 314 aa11.74□□□□□ -0.53
TIMP2-203ENST00000585421 MAP3K2Q9Y2U5 619 aa11.74□□□□□ -0.53
TIMP2-203ENST00000585421 TNS2Q63HR2 1409 aa11.74□□□□□ -0.53
TIMP2-203ENST00000585421 CWF19L2Q2TBE0 894 aaKnown RBP11.73□□□□□ -0.53
TIMP2-203ENST00000585421 DNAJC10Q8IXB1 793 aa11.73□□□□□ -0.53
TIMP2-203ENST00000585421 SIRT2Q8IXJ6 389 aa11.73□□□□□ -0.53
TIMP2-203ENST00000585421 JARID2Q92833 1246 aaPredicted RBP11.73□□□□□ -0.53
TIMP2-203ENST00000585421 CSPP1Q1MSJ5 1256 aa11.73□□□□□ -0.53
TIMP2-203ENST00000585421 SASS6Q6UVJ0 657 aa11.73□□□□□ -0.53
TIMP2-203ENST00000585421 COPS6Q7L5N1 327 aa11.73□□□□□ -0.53
TIMP2-203ENST00000585421 ADCY9O60503 1353 aa11.73□□□□□ -0.53
TIMP2-203ENST00000585421 HOXB7P09629 217 aa11.73□□□□□ -0.53
TIMP2-203ENST00000585421 VPS72Q15906 364 aa11.73□□□□□ -0.53
TIMP2-203ENST00000585421 NBPF26B4DH59 902 aa11.72□□□□□ -0.53
TIMP2-203ENST00000585421 IGSF3O75054 1194 aa11.72□□□□□ -0.53
TIMP2-203ENST00000585421 NBPF14Q5TI25 921 aa11.72□□□□□ -0.53
TIMP2-203ENST00000585421 NBPF10Q6P3W6 841 aaKnown RBP11.72□□□□□ -0.53
TIMP2-203ENST00000585421 NBPF15Q8N660 670 aa11.72□□□□□ -0.53
TIMP2-203ENST00000585421 SLC4A9Q96Q91 983 aa11.72□□□□□ -0.53
TIMP2-203ENST00000585421 IRX3P78415 501 aaPredicted RBP11.72□□□□□ -0.53
TIMP2-203ENST00000585421 DDX21Q9NR30 783 aaKnown RBP eCLIP11.72□□□□□ -0.53
TIMP2-203ENST00000585421 DNAAF4Q8WXU2 420 aa11.71□□□□□ -0.53
TIMP2-203ENST00000585421 ZNF500O60304 480 aaPredicted RBP11.71□□□□□ -0.53
TIMP2-203ENST00000585421 PDZRN3Q9UPQ7 1066 aa11.71□□□□□ -0.53
TIMP2-203ENST00000585421 TTLL7Q6ZT98 887 aa11.71□□□□□ -0.54
TIMP2-203ENST00000585421 RWDD1Q9H446 243 aaPredicted RBP11.71□□□□□ -0.54
TIMP2-203ENST00000585421 THRAP3Q9Y2W1 955 aaKnown RBP11.71□□□□□ -0.54
TIMP2-203ENST00000585421 NBPF7P0C2Y1 421 aaPredicted RBP11.7□□□□□ -0.54
TIMP2-203ENST00000585421 RIC3Q7Z5B4 369 aa11.7□□□□□ -0.54
TIMP2-203ENST00000585421 ATP5J2-PTCD1G3V325 749 aa11.7□□□□□ -0.54
TIMP2-203ENST00000585421 BARGINQ6ZT62 677 aa11.7□□□□□ -0.54
TIMP2-203ENST00000585421 ZBTB3Q9H5J0 574 aa11.7□□□□□ -0.54
TIMP2-203ENST00000585421 NOL7Q9UMY1 257 aaKnown RBP11.7□□□□□ -0.54
TIMP2-203ENST00000585421 CCT4P50991 539 aaKnown RBP11.7□□□□□ -0.54
TIMP2-203ENST00000585421 ZNF771Q7L3S4 317 aaPredicted RBP11.7□□□□□ -0.54
TIMP2-203ENST00000585421 GJD4Q96KN9 370 aaPredicted RBP11.7□□□□□ -0.54
TIMP2-203ENST00000585421 LNPKQ9C0E8 428 aa11.7□□□□□ -0.54
TIMP2-203ENST00000585421 SRCIN1Q9C0H9 1055 aa11.7□□□□□ -0.54
TIMP2-203ENST00000585421 LRRFIP2Q9Y608 721 aaKnown RBP11.7□□□□□ -0.54
TIMP2-203ENST00000585421 BCL9O00512 1426 aa11.69□□□□□ -0.54
TIMP2-203ENST00000585421 KCPQ6ZWJ8 1503 aa11.69□□□□□ -0.54
TIMP2-203ENST00000585421 SMIM5Q71RC9 77 aa11.69□□□□□ -0.54
TIMP2-203ENST00000585421 USP44Q9H0E7 712 aa11.69□□□□□ -0.54
TIMP2-203ENST00000585421 SOS1Q07889 1333 aaPredicted RBP11.69□□□□□ -0.54
TIMP2-203ENST00000585421 NWD2Q9ULI1 1742 aa11.69□□□□□ -0.54
TIMP2-203ENST00000585421 TBC1D32Q96NH3 1257 aa11.69□□□□□ -0.54
TIMP2-203ENST00000585421 CDCA7Q9BWT1 371 aaPredicted RBP11.69□□□□□ -0.54
TIMP2-203ENST00000585421 HYPKQ9NX55 129 aa11.69□□□□□ -0.54
TIMP2-203ENST00000585421 GOLGB1Q14789 3259 aaKnown RBP11.69□□□□□ -0.54
TIMP2-203ENST00000585421 GLI3P10071 1580 aa11.69□□□□□ -0.54
TIMP2-203ENST00000585421 ITGB4P16144 1822 aa11.69□□□□□ -0.54
TIMP2-203ENST00000585421 BEND3Q5T5X7 828 aa11.68□□□□□ -0.54
TIMP2-203ENST00000585421 LRP10Q7Z4F1 713 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms