RNA–Protein interactions for RNA: ENST00000583753.5

RNF43-207, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-207ENST00000583753 CHST3Q7LGC8 479 aa12.5□□□□□ -0.41
RNF43-207ENST00000583753 FAM200AQ8TCP9 573 aa12.5□□□□□ -0.41
RNF43-207ENST00000583753 ZSCAN31Q96LW9 406 aaPredicted RBP12.5□□□□□ -0.41
RNF43-207ENST00000583753 USP44Q9H0E7 712 aa12.5□□□□□ -0.41
RNF43-207ENST00000583753 TOMM22Q9NS69 142 aa12.5□□□□□ -0.41
RNF43-207ENST00000583753 SGSM2O43147 1006 aa12.5□□□□□ -0.41
RNF43-207ENST00000583753 PTPN14Q15678 1187 aa12.5□□□□□ -0.41
RNF43-207ENST00000583753 PDILTQ8N807 584 aa12.5□□□□□ -0.41
RNF43-207ENST00000583753 PPP6R1Q9UPN7 881 aa12.5□□□□□ -0.41
RNF43-207ENST00000583753 MAP3K4Q9Y6R4 1608 aa12.49□□□□□ -0.41
RNF43-207ENST00000583753 CEBPAP49715 358 aaPredicted RBP12.49□□□□□ -0.41
RNF43-207ENST00000583753 LARP1Q6PKG0 1096 aaKnown RBP12.49□□□□□ -0.41
RNF43-207ENST00000583753 MAP3K2Q9Y2U5 619 aa12.49□□□□□ -0.41
RNF43-207ENST00000583753 HSPA4P34932 840 aa12.49□□□□□ -0.41
RNF43-207ENST00000583753 NMIQ13287 307 aaPredicted RBP12.49□□□□□ -0.41
RNF43-207ENST00000583753 SKIDA1Q1XH10 827 aa12.49□□□□□ -0.41
RNF43-207ENST00000583753 CPLX1O14810 134 aa12.49□□□□□ -0.41
RNF43-207ENST00000583753 TTLL5Q6EMB2 1281 aa12.49□□□□□ -0.41
RNF43-207ENST00000583753 SOS1Q07889 1333 aaPredicted RBP12.49□□□□□ -0.41
RNF43-207ENST00000583753 PSME1Q06323 249 aa12.48□□□□□ -0.41
RNF43-207ENST00000583753 ME3Q16798 604 aa12.48□□□□□ -0.41
RNF43-207ENST00000583753 WASHC4Q2M389 1173 aa12.48□□□□□ -0.41
RNF43-207ENST00000583753 IBTKQ9P2D0 1353 aaPredicted RBP12.48□□□□□ -0.41
RNF43-207ENST00000583753 JAK2O60674 1132 aa12.48□□□□□ -0.41
RNF43-207ENST00000583753 ATP2B3Q16720 1220 aa12.48□□□□□ -0.41
RNF43-207ENST00000583753 NCBP3Q53F19 620 aaKnown RBP12.48□□□□□ -0.41
RNF43-207ENST00000583753 SMAP1Q8IYB5 467 aaPredicted RBP12.48□□□□□ -0.41
RNF43-207ENST00000583753 MNS1Q8NEH6 495 aa12.48□□□□□ -0.41
RNF43-207ENST00000583753 BRF1Q92994 677 aa12.48□□□□□ -0.41
RNF43-207ENST00000583753 MYOM2P54296 1465 aa12.48□□□□□ -0.41
RNF43-207ENST00000583753 TERF1P54274 439 aa12.48□□□□□ -0.41
RNF43-207ENST00000583753 TPM4P67936 248 aa12.48□□□□□ -0.41
RNF43-207ENST00000583753 TTC6Q86TZ1 520 aa12.48□□□□□ -0.41
RNF43-207ENST00000583753 ZFP91Q96JP5 570 aaPredicted RBP12.48□□□□□ -0.41
RNF43-207ENST00000583753 USP16Q9Y5T5 823 aa12.48□□□□□ -0.41
RNF43-207ENST00000583753 POLR3GO15318 223 aaPredicted RBP12.47□□□□□ -0.41
RNF43-207ENST00000583753 KCNQ3O43525 872 aa12.47□□□□□ -0.41
RNF43-207ENST00000583753 TNNT3P45378 269 aaPredicted RBP12.47□□□□□ -0.41
RNF43-207ENST00000583753 BRPF1P55201 1214 aaPredicted RBP12.47□□□□□ -0.41
RNF43-207ENST00000583753 STK38Q15208 465 aa12.47□□□□□ -0.41
RNF43-207ENST00000583753 CBX8Q9HC52 389 aa12.47□□□□□ -0.41
RNF43-207ENST00000583753 SH2B1Q9NRF2 756 aaPredicted RBP12.47□□□□□ -0.41
RNF43-207ENST00000583753 POGZQ7Z3K3 1410 aa12.47□□□□□ -0.41
RNF43-207ENST00000583753 APPP05067 770 aa12.47□□□□□ -0.41
RNF43-207ENST00000583753 CUL4AQ13619 759 aa12.47□□□□□ -0.41
RNF43-207ENST00000583753 CEP135Q66GS9 1140 aa12.47□□□□□ -0.41
RNF43-207ENST00000583753 CREB3L3Q68CJ9 461 aa12.47□□□□□ -0.41
RNF43-207ENST00000583753 CCDC129Q6ZRS4 1044 aa12.47□□□□□ -0.41
RNF43-207ENST00000583753 DDX46Q7L014 1031 aaKnown RBP12.47□□□□□ -0.41
RNF43-207ENST00000583753 SCAND2PQ9GZW5 306 aaPredicted RBP12.47□□□□□ -0.41
RNF43-207ENST00000583753 ZFYVE9O95405 1425 aa12.47□□□□□ -0.41
RNF43-207ENST00000583753 IQGAP1P46940 1657 aa12.47□□□□□ -0.41
RNF43-207ENST00000583753 POLR3DP05423 398 aaPredicted RBP12.46□□□□□ -0.41
RNF43-207ENST00000583753 SKILP12757 684 aa12.46□□□□□ -0.41
RNF43-207ENST00000583753 CLEC17AQ6ZS10 378 aa12.46□□□□□ -0.41
RNF43-207ENST00000583753 MTMR6Q9Y217 621 aa12.46□□□□□ -0.41
RNF43-207ENST00000583753 LAMC1P11047 1609 aa12.46□□□□□ -0.41
RNF43-207ENST00000583753 RAD50Q92878 1312 aa12.46□□□□□ -0.41
RNF43-207ENST00000583753 PTCH1Q13635 1447 aa12.46□□□□□ -0.42
RNF43-207ENST00000583753 FAM135BQ49AJ0 1406 aa12.46□□□□□ -0.42
RNF43-207ENST00000583753 DDX58O95786 925 aaKnown RBP12.46□□□□□ -0.42
RNF43-207ENST00000583753 TAF7LQ5H9L4 462 aa12.46□□□□□ -0.42
RNF43-207ENST00000583753 LGR6Q9HBX8 967 aa12.46□□□□□ -0.42
RNF43-207ENST00000583753 SPHKAPQ2M3C7 1700 aa12.46□□□□□ -0.42
RNF43-207ENST00000583753 CCAR1Q8IX12 1150 aaKnown RBP12.45□□□□□ -0.42
RNF43-207ENST00000583753 SYNE3Q6ZMZ3 975 aa12.45□□□□□ -0.42
RNF43-207ENST00000583753 FSIP1Q8NA03 581 aa12.45□□□□□ -0.42
RNF43-207ENST00000583753 LRRC59Q96AG4 307 aaKnown RBP12.45□□□□□ -0.42
RNF43-207ENST00000583753 HDAC5Q9UQL6 1122 aa12.45□□□□□ -0.42
RNF43-207ENST00000583753 PLXNC1O60486 1568 aa12.45□□□□□ -0.42
RNF43-207ENST00000583753 PIK3R4Q99570 1358 aa12.45□□□□□ -0.42
RNF43-207ENST00000583753 CEP152O94986 1710 aa12.45□□□□□ -0.42
RNF43-207ENST00000583753 ATP5J2-PTCD1G3V325 749 aa12.45□□□□□ -0.42
RNF43-207ENST00000583753 PTCD1O75127 700 aaKnown RBP12.45□□□□□ -0.42
RNF43-207ENST00000583753 HAND2P61296 217 aa12.45□□□□□ -0.42
RNF43-207ENST00000583753 TPCN1Q9ULQ1 816 aa12.45□□□□□ -0.42
RNF43-207ENST00000583753 SLC39A6Q13433 755 aa12.44□□□□□ -0.42
RNF43-207ENST00000583753 ARID5BQ14865 1188 aa12.44□□□□□ -0.42
RNF43-207ENST00000583753 ZFYVE16Q7Z3T8 1539 aa12.44□□□□□ -0.42
RNF43-207ENST00000583753 KIF1BO60333 1816 aa12.44□□□□□ -0.42
RNF43-207ENST00000583753 LRRC7Q96NW7 1537 aa12.44□□□□□ -0.42
RNF43-207ENST00000583753 NR1I2O75469 434 aa12.44□□□□□ -0.42
RNF43-207ENST00000583753 FKBP4Q02790 459 aaKnown RBP eCLIP12.44□□□□□ -0.42
RNF43-207ENST00000583753 TMC6Q7Z403 805 aa12.44□□□□□ -0.42
RNF43-207ENST00000583753 NLRP2Q9NX02 1062 aa12.44□□□□□ -0.42
RNF43-207ENST00000583753 AOPEPQ8N6M6 819 aa12.44□□□□□ -0.42
RNF43-207ENST00000583753 EVI5LQ96CN4 794 aa12.44□□□□□ -0.42
RNF43-207ENST00000583753 ANKRD1Q15327 319 aa12.43□□□□□ -0.42
RNF43-207ENST00000583753 ESCO1Q5FWF5 840 aa12.43□□□□□ -0.42
RNF43-207ENST00000583753 OTUD7BQ6GQQ9 843 aa12.43□□□□□ -0.42
RNF43-207ENST00000583753 Q6ZUG5 572 aa12.43□□□□□ -0.42
RNF43-207ENST00000583753 MYD88Q99836 296 aa12.43□□□□□ -0.42
RNF43-207ENST00000583753 FTOQ9C0B1 505 aaKnown RBP eCLIP12.43□□□□□ -0.42
RNF43-207ENST00000583753 ZSWIM4Q9H7M6 989 aa12.43□□□□□ -0.42
RNF43-207ENST00000583753 SNRKQ9NRH2 765 aa12.43□□□□□ -0.42
RNF43-207ENST00000583753 SERPINC1P01008 464 aa12.43□□□□□ -0.42
RNF43-207ENST00000583753 PDE4CQ08493 712 aa12.43□□□□□ -0.42
RNF43-207ENST00000583753 ERC1Q8IUD2 1116 aa12.43□□□□□ -0.42
RNF43-207ENST00000583753 CEP57L1Q8IYX8 460 aa12.43□□□□□ -0.42
RNF43-207ENST00000583753 IL17REQ8NFR9 667 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms