RNA–Protein interactions for RNA: ENST00000583182.5

CDK5RAP3-226, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 709 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-226ENST00000583182 SRGNP10124 158 aa19.88■□□□□ 0.77
CDK5RAP3-226ENST00000583182 PIP4K2AP48426 406 aaPredicted RBP19.88■□□□□ 0.77
CDK5RAP3-226ENST00000583182 CNKSR1Q969H4 720 aa19.88■□□□□ 0.77
CDK5RAP3-226ENST00000583182 BTBD11A6QL63 1104 aa19.87■□□□□ 0.77
CDK5RAP3-226ENST00000583182 DDNO94850 711 aaPredicted RBP19.87■□□□□ 0.77
CDK5RAP3-226ENST00000583182 STYK1Q6J9G0 422 aa19.87■□□□□ 0.77
CDK5RAP3-226ENST00000583182 PRPF40BQ6NWY9 871 aaKnown RBP19.87■□□□□ 0.77
CDK5RAP3-226ENST00000583182 NPM2Q86SE8 214 aaKnown RBP19.87■□□□□ 0.77
CDK5RAP3-226ENST00000583182 DZIP3Q86Y13 1208 aaKnown RBP19.87■□□□□ 0.77
CDK5RAP3-226ENST00000583182 USP16Q9Y5T5 823 aa19.87■□□□□ 0.77
CDK5RAP3-226ENST00000583182 PRAMEF22A3QJZ6 481 aa19.86■□□□□ 0.77
CDK5RAP3-226ENST00000583182 NPHP1O15259 732 aa19.86■□□□□ 0.77
CDK5RAP3-226ENST00000583182 POTEIP0CG38 1075 aa19.86■□□□□ 0.77
CDK5RAP3-226ENST00000583182 POTEJP0CG39 1038 aa19.86■□□□□ 0.77
CDK5RAP3-226ENST00000583182 PRKAR2BP31323 418 aa19.86■□□□□ 0.77
CDK5RAP3-226ENST00000583182 ST5P78524 1137 aa19.86■□□□□ 0.77
CDK5RAP3-226ENST00000583182 RSPH6AQ9H0K4 717 aa19.86■□□□□ 0.77
CDK5RAP3-226ENST00000583182 MASTLQ96GX5 879 aa19.85■□□□□ 0.77
CDK5RAP3-226ENST00000583182 CHADLQ6NUI6 762 aa19.84■□□□□ 0.77
CDK5RAP3-226ENST00000583182 SOGA3Q5TF21 947 aa19.82■□□□□ 0.76
CDK5RAP3-226ENST00000583182 C7orf43Q8WVR3 580 aa19.82■□□□□ 0.76
CDK5RAP3-226ENST00000583182 CREBZFQ9NS37 354 aa19.82■□□□□ 0.76
CDK5RAP3-226ENST00000583182 CLEC4GQ6UXB4 293 aa19.81■□□□□ 0.76
CDK5RAP3-226ENST00000583182 NBPF5PQ86XG9 351 aaPredicted RBP19.81■□□□□ 0.76
CDK5RAP3-226ENST00000583182 MKRN1Q9UHC7 482 aaKnown RBP19.81■□□□□ 0.76
CDK5RAP3-226ENST00000583182 SCN4AP35499 1836 aa19.81■□□□□ 0.76
CDK5RAP3-226ENST00000583182 SNRPA1P09661 255 aaKnown RBP19.8■□□□□ 0.76
CDK5RAP3-226ENST00000583182 MCM10Q7L590 875 aa19.8■□□□□ 0.76
CDK5RAP3-226ENST00000583182 NBPF26B4DH59 902 aa19.79■□□□□ 0.76
CDK5RAP3-226ENST00000583182 CCDC93Q567U6 631 aa19.79■□□□□ 0.76
CDK5RAP3-226ENST00000583182 NBPF10Q6P3W6 841 aaKnown RBP19.79■□□□□ 0.76
CDK5RAP3-226ENST00000583182 NBPF15Q8N660 670 aa19.79■□□□□ 0.76
CDK5RAP3-226ENST00000583182 CFAP53Q96M91 514 aa19.79■□□□□ 0.76
CDK5RAP3-226ENST00000583182 KLRG2A4D1S0 409 aaPredicted RBP19.78■□□□□ 0.76
CDK5RAP3-226ENST00000583182 NPR1P16066 1061 aa19.78■□□□□ 0.76
CDK5RAP3-226ENST00000583182 OLFM4Q6UX06 510 aa19.78■□□□□ 0.76
CDK5RAP3-226ENST00000583182 L3MBTL3Q96JM7 780 aaPredicted RBP19.78■□□□□ 0.76
CDK5RAP3-226ENST00000583182 ZNF652Q9Y2D9 606 aa19.78■□□□□ 0.76
CDK5RAP3-226ENST00000583182 IQCA1LA6NCM1 817 aa19.77■□□□□ 0.76
CDK5RAP3-226ENST00000583182 DCTN1Q14203 1278 aa19.77■□□□□ 0.76
CDK5RAP3-226ENST00000583182 TAF1DQ9H5J8 278 aaPredicted RBP19.77■□□□□ 0.76
CDK5RAP3-226ENST00000583182 NIP7Q9Y221 180 aaKnown RBP eCLIP19.77■□□□□ 0.76
CDK5RAP3-226ENST00000583182 PASKQ96RG2 1323 aa19.76■□□□□ 0.75
CDK5RAP3-226ENST00000583182 ZNF541Q9H0D2 1346 aa19.76■□□□□ 0.75
CDK5RAP3-226ENST00000583182 U2AF1L5P0DN76 240 aaPredicted RBP19.76■□□□□ 0.75
CDK5RAP3-226ENST00000583182 U2AF1Q01081 240 aaKnown RBP eCLIP19.76■□□□□ 0.75
CDK5RAP3-226ENST00000583182 FKBP4Q02790 459 aaKnown RBP eCLIP19.76■□□□□ 0.75
CDK5RAP3-226ENST00000583182 TPTE2Q6XPS3 522 aa19.76■□□□□ 0.75
CDK5RAP3-226ENST00000583182 LDHDQ86WU2 507 aa19.76■□□□□ 0.75
CDK5RAP3-226ENST00000583182 RTF1Q92541 710 aaKnown RBP19.76■□□□□ 0.75
CDK5RAP3-226ENST00000583182 ZNF277Q9NRM2 450 aaPredicted RBP19.76■□□□□ 0.75
CDK5RAP3-226ENST00000583182 NUDCQ9Y266 331 aa19.76■□□□□ 0.75
CDK5RAP3-226ENST00000583182 CNTNAP1P78357 1384 aa19.75■□□□□ 0.75
CDK5RAP3-226ENST00000583182 FAM177BA6PVY3 158 aa19.75■□□□□ 0.75
CDK5RAP3-226ENST00000583182 RGL2O15211 777 aa19.74■□□□□ 0.75
CDK5RAP3-226ENST00000583182 HLFQ16534 295 aa19.74■□□□□ 0.75
CDK5RAP3-226ENST00000583182 LAMB4A4D0S4 1761 aa19.74■□□□□ 0.75
CDK5RAP3-226ENST00000583182 ADAMTSL1Q8N6G6 1762 aa19.74■□□□□ 0.75
CDK5RAP3-226ENST00000583182 ITGBL1O95965 494 aaPredicted RBP19.73■□□□□ 0.75
CDK5RAP3-226ENST00000583182 PPP2R1AP30153 589 aa19.73■□□□□ 0.75
CDK5RAP3-226ENST00000583182 SNED1Q8TER0 1413 aa19.71■□□□□ 0.75
CDK5RAP3-226ENST00000583182 FOXN1O15353 648 aa19.71■□□□□ 0.75
CDK5RAP3-226ENST00000583182 HTATSF1O43719 755 aaKnown RBP19.71■□□□□ 0.75
CDK5RAP3-226ENST00000583182 EAPPQ56P03 285 aaPredicted RBP19.71■□□□□ 0.75
CDK5RAP3-226ENST00000583182 RTKN2Q8IZC4 609 aa19.71■□□□□ 0.75
CDK5RAP3-226ENST00000583182 MIS18AQ9NYP9 233 aa19.71■□□□□ 0.75
CDK5RAP3-226ENST00000583182 NUP98P52948 1817 aa19.7■□□□□ 0.74
CDK5RAP3-226ENST00000583182 IARSP41252 1262 aaKnown RBP19.7■□□□□ 0.74
CDK5RAP3-226ENST00000583182 TAF7Q15545 349 aaPredicted RBP19.7■□□□□ 0.74
CDK5RAP3-226ENST00000583182 SYNE4Q8N205 404 aa19.7■□□□□ 0.74
CDK5RAP3-226ENST00000583182 HACL1Q9UJ83 578 aa19.7■□□□□ 0.74
CDK5RAP3-226ENST00000583182 DLG5Q8TDM6 1919 aa19.7■□□□□ 0.74
CDK5RAP3-226ENST00000583182 ABCC12Q96J65 1359 aa19.7■□□□□ 0.74
CDK5RAP3-226ENST00000583182 TMEM88BA6NKF7 163 aa19.69■□□□□ 0.74
CDK5RAP3-226ENST00000583182 FZD9O00144 591 aa19.69■□□□□ 0.74
CDK5RAP3-226ENST00000583182 ALDH1B1P30837 517 aa19.69■□□□□ 0.74
CDK5RAP3-226ENST00000583182 EPHX2P34913 555 aa19.69■□□□□ 0.74
CDK5RAP3-226ENST00000583182 KDM3BQ7LBC6 1761 aa19.69■□□□□ 0.74
CDK5RAP3-226ENST00000583182 RNF123Q5XPI4 1314 aa19.69■□□□□ 0.74
CDK5RAP3-226ENST00000583182 VEGFBP49765 207 aa19.68■□□□□ 0.74
CDK5RAP3-226ENST00000583182 CLEC11AQ9Y240 323 aa19.68■□□□□ 0.74
CDK5RAP3-226ENST00000583182 COL4A5P29400 1685 aa19.68■□□□□ 0.74
CDK5RAP3-226ENST00000583182 GTF2E1P29083 439 aaPredicted RBP19.67■□□□□ 0.74
CDK5RAP3-226ENST00000583182 CRY2Q49AN0 593 aa19.67■□□□□ 0.74
CDK5RAP3-226ENST00000583182 NUTM1Q86Y26 1132 aa19.67■□□□□ 0.74
CDK5RAP3-226ENST00000583182 NGEFQ8N5V2 710 aa19.67■□□□□ 0.74
CDK5RAP3-226ENST00000583182 PSMD1Q99460 953 aa19.66■□□□□ 0.74
CDK5RAP3-226ENST00000583182 ERVV-1B6SEH8 477 aa19.65■□□□□ 0.74
CDK5RAP3-226ENST00000583182 MAP1SQ66K74 1059 aaPredicted RBP19.65■□□□□ 0.74
CDK5RAP3-226ENST00000583182 TTLL7Q6ZT98 887 aa19.65■□□□□ 0.74
CDK5RAP3-226ENST00000583182 CNTROBQ8N137 903 aa19.65■□□□□ 0.74
CDK5RAP3-226ENST00000583182 GPC2Q8N158 579 aa19.65■□□□□ 0.74
CDK5RAP3-226ENST00000583182 PRDM10Q9NQV6 1147 aa19.65■□□□□ 0.74
CDK5RAP3-226ENST00000583182 LTBP1Q14766 1721 aa19.65■□□□□ 0.74
CDK5RAP3-226ENST00000583182 SLC51AQ86UW1 340 aa19.64■□□□□ 0.73
CDK5RAP3-226ENST00000583182 PNMA8AQ86V59 439 aaPredicted RBP19.64■□□□□ 0.73
CDK5RAP3-226ENST00000583182 NYXQ9GZU5 481 aa19.64■□□□□ 0.73
CDK5RAP3-226ENST00000583182 MAP3K15Q6ZN16 1313 aa19.64■□□□□ 0.73
CDK5RAP3-226ENST00000583182 UBN2Q6ZU65 1347 aa19.63■□□□□ 0.73
CDK5RAP3-226ENST00000583182 JDP2Q8WYK2 163 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 238.3 ms