RNA–Protein interactions for RNA: ENST00000582844.5

CSNK1D-221, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 957 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-221ENST00000582844 PRKRIP1Q9H875 184 aaPredicted RBP28.01■■■□□ 2.07
CSNK1D-221ENST00000582844 TSPYL4Q9UJ04 414 aa28.01■■■□□ 2.07
CSNK1D-221ENST00000582844 PDZRN3Q9UPQ7 1066 aa28.01■■■□□ 2.07
CSNK1D-221ENST00000582844 ST5P78524 1137 aa28■■■□□ 2.07
CSNK1D-221ENST00000582844 RASSF7Q02833 373 aa28■■■□□ 2.07
CSNK1D-221ENST00000582844 WDR43Q15061 677 aaKnown RBP eCLIP28■■■□□ 2.07
CSNK1D-221ENST00000582844 NEUROD2Q15784 382 aa28■■■□□ 2.07
CSNK1D-221ENST00000582844 NBPF5PQ86XG9 351 aaPredicted RBP28■■■□□ 2.07
CSNK1D-221ENST00000582844 NIP7Q9Y221 180 aaKnown RBP eCLIP28■■■□□ 2.07
CSNK1D-221ENST00000582844 CCDC88AQ3V6T2 1871 aa27.98■■■□□ 2.07
CSNK1D-221ENST00000582844 RGL2O15211 777 aa27.98■■■□□ 2.07
CSNK1D-221ENST00000582844 MYL6BP14649 208 aa27.98■■■□□ 2.07
CSNK1D-221ENST00000582844 LMOD3Q0VAK6 560 aa27.98■■■□□ 2.07
CSNK1D-221ENST00000582844 ADAMTS8Q9UP79 889 aa27.98■■■□□ 2.07
CSNK1D-221ENST00000582844 RUNDC1Q96C34 613 aa27.97■■■□□ 2.07
CSNK1D-221ENST00000582844 ZNF219Q9P2Y4 722 aaPredicted RBP27.97■■■□□ 2.07
CSNK1D-221ENST00000582844 NUP98P52948 1817 aa27.97■■■□□ 2.07
CSNK1D-221ENST00000582844 FAM177BA6PVY3 158 aa27.96■■■□□ 2.07
CSNK1D-221ENST00000582844 PRELPP51888 382 aa27.96■■■□□ 2.07
CSNK1D-221ENST00000582844 NMRK2Q9NPI5 230 aa27.96■■■□□ 2.07
CSNK1D-221ENST00000582844 CACNA1SQ13698 1873 aa27.95■■■□□ 2.07
CSNK1D-221ENST00000582844 SRGNP10124 158 aa27.95■■■□□ 2.06
CSNK1D-221ENST00000582844 TPTE2Q6XPS3 522 aa27.95■■■□□ 2.06
CSNK1D-221ENST00000582844 TTLL7Q6ZT98 887 aa27.95■■■□□ 2.06
CSNK1D-221ENST00000582844 SLX4Q8IY92 1834 aa27.95■■■□□ 2.06
CSNK1D-221ENST00000582844 C21orf2O43822 256 aa27.94■■■□□ 2.06
CSNK1D-221ENST00000582844 BABAM1Q9NWV8 329 aa27.94■■■□□ 2.06
CSNK1D-221ENST00000582844 ERVV-1B6SEH8 477 aa27.93■■■□□ 2.06
CSNK1D-221ENST00000582844 NFKBIEO00221 500 aa27.93■■■□□ 2.06
CSNK1D-221ENST00000582844 LMNB1P20700 586 aa27.93■■■□□ 2.06
CSNK1D-221ENST00000582844 STYK1Q6J9G0 422 aa27.93■■■□□ 2.06
CSNK1D-221ENST00000582844 TRIM35Q9UPQ4 493 aa27.93■■■□□ 2.06
CSNK1D-221ENST00000582844 MAP3K15Q6ZN16 1313 aa27.92■■■□□ 2.06
CSNK1D-221ENST00000582844 EIF2S2P20042 333 aaKnown RBP27.92■■■□□ 2.06
CSNK1D-221ENST00000582844 CNKSR1Q969H4 720 aa27.92■■■□□ 2.06
CSNK1D-221ENST00000582844 MASTLQ96GX5 879 aa27.92■■■□□ 2.06
CSNK1D-221ENST00000582844 KIF6Q6ZMV9 814 aa27.91■■■□□ 2.06
CSNK1D-221ENST00000582844 FER1L6Q2WGJ9 1857 aa27.9■■■□□ 2.06
CSNK1D-221ENST00000582844 ZBTB3Q9H5J0 574 aa27.9■■■□□ 2.06
CSNK1D-221ENST00000582844 ERBB4Q15303 1308 aa27.9■■■□□ 2.06
CSNK1D-221ENST00000582844 CEP350Q5VT06 3117 aa27.9■■■□□ 2.06
CSNK1D-221ENST00000582844 PDIA6Q15084 440 aa27.89■■■□□ 2.06
CSNK1D-221ENST00000582844 KDM2BQ8NHM5 1336 aa27.89■■■□□ 2.05
CSNK1D-221ENST00000582844 KLRG2A4D1S0 409 aaPredicted RBP27.88■■■□□ 2.05
CSNK1D-221ENST00000582844 CHL1O00533 1208 aa27.88■■■□□ 2.05
CSNK1D-221ENST00000582844 GTF2E1P29083 439 aaPredicted RBP27.88■■■□□ 2.05
CSNK1D-221ENST00000582844 PRPF40BQ6NWY9 871 aaKnown RBP27.88■■■□□ 2.05
CSNK1D-221ENST00000582844 LAS1LQ9Y4W2 734 aaKnown RBP27.88■■■□□ 2.05
CSNK1D-221ENST00000582844 ARFGEF2Q9Y6D5 1785 aa27.88■■■□□ 2.05
CSNK1D-221ENST00000582844 TOMM70O94826 608 aa27.87■■■□□ 2.05
CSNK1D-221ENST00000582844 ANXA1P04083 346 aa27.86■■■□□ 2.05
CSNK1D-221ENST00000582844 NPR1P16066 1061 aa27.86■■■□□ 2.05
CSNK1D-221ENST00000582844 HSPA6P17066 643 aa27.86■■■□□ 2.05
CSNK1D-221ENST00000582844 GPTP24298 496 aa27.86■■■□□ 2.05
CSNK1D-221ENST00000582844 LRP10Q7Z4F1 713 aa27.86■■■□□ 2.05
CSNK1D-221ENST00000582844 RRAGCQ9HB90 399 aa27.86■■■□□ 2.05
CSNK1D-221ENST00000582844 KRT24Q2M2I5 525 aa27.85■■■□□ 2.05
CSNK1D-221ENST00000582844 PROSER3Q2NL68 480 aa27.85■■■□□ 2.05
CSNK1D-221ENST00000582844 NECTIN2Q92692 538 aa27.85■■■□□ 2.05
CSNK1D-221ENST00000582844 ZC3H4Q9UPT8 1303 aaKnown RBP27.85■■■□□ 2.05
CSNK1D-221ENST00000582844 TIAM2Q8IVF5 1701 aa27.84■■■□□ 2.05
CSNK1D-221ENST00000582844 ZEB1P37275 1124 aaPredicted RBP27.84■■■□□ 2.05
CSNK1D-221ENST00000582844 NUTM1Q86Y26 1132 aa27.84■■■□□ 2.05
CSNK1D-221ENST00000582844 NYXQ9GZU5 481 aa27.84■■■□□ 2.05
CSNK1D-221ENST00000582844 DICER1Q9UPY3 1922 aaKnown RBP27.83■■■□□ 2.05
CSNK1D-221ENST00000582844 GIGYF2Q6Y7W6 1299 aaKnown RBP27.83■■■□□ 2.05
CSNK1D-221ENST00000582844 ZNF34Q8IZ26 560 aa27.83■■■□□ 2.05
CSNK1D-221ENST00000582844 C7orf43Q8WVR3 580 aa27.83■■■□□ 2.05
CSNK1D-221ENST00000582844 UBN2Q6ZU65 1347 aa27.83■■■□□ 2.05
CSNK1D-221ENST00000582844 ERFEQ4G0M1 354 aa27.82■■■□□ 2.04
CSNK1D-221ENST00000582844 SUSD4Q5VX71 490 aa27.82■■■□□ 2.04
CSNK1D-221ENST00000582844 TNRC6CQ9HCJ0 1690 aaKnown RBP27.81■■■□□ 2.04
CSNK1D-221ENST00000582844 GLTPD2A6NH11 291 aa27.81■■■□□ 2.04
CSNK1D-221ENST00000582844 TAOK3Q9H2K8 898 aa27.81■■■□□ 2.04
CSNK1D-221ENST00000582844 ABCC12Q96J65 1359 aa27.81■■■□□ 2.04
CSNK1D-221ENST00000582844 APAF1O14727 1248 aa27.8■■■□□ 2.04
CSNK1D-221ENST00000582844 SOGA3Q5TF21 947 aa27.8■■■□□ 2.04
CSNK1D-221ENST00000582844 C16orf71Q8IYS4 520 aaPredicted RBP27.8■■■□□ 2.04
CSNK1D-221ENST00000582844 LTBP3Q9NS15 1303 aa27.8■■■□□ 2.04
CSNK1D-221ENST00000582844 AIMP1Q12904 312 aaKnown RBP27.78■■■□□ 2.04
CSNK1D-221ENST00000582844 COPS6Q7L5N1 327 aa27.78■■■□□ 2.04
CSNK1D-221ENST00000582844 ALDH1B1P30837 517 aa27.77■■■□□ 2.04
CSNK1D-221ENST00000582844 CRY2Q49AN0 593 aa27.77■■■□□ 2.04
CSNK1D-221ENST00000582844 OLFM4Q6UX06 510 aa27.77■■■□□ 2.04
CSNK1D-221ENST00000582844 RBM46Q8TBY0 533 aaKnown RBP27.77■■■□□ 2.04
CSNK1D-221ENST00000582844 CFAP44Q96MT7 982 aa27.77■■■□□ 2.04
CSNK1D-221ENST00000582844 IBTKQ9P2D0 1353 aaPredicted RBP27.76■■■□□ 2.03
CSNK1D-221ENST00000582844 CCDC184Q52MB2 194 aa27.76■■■□□ 2.03
CSNK1D-221ENST00000582844 CCDC93Q567U6 631 aa27.76■■■□□ 2.03
CSNK1D-221ENST00000582844 XAGE3Q8WTP9 111 aa27.76■■■□□ 2.03
CSNK1D-221ENST00000582844 DDX21Q9NR30 783 aaKnown RBP eCLIP27.76■■■□□ 2.036e-8■■□□□ 13.9
CSNK1D-221ENST00000582844 NTSR2O95665 410 aa27.75■■■□□ 2.03
CSNK1D-221ENST00000582844 PARP10Q53GL7 1025 aa27.74■■■□□ 2.03
CSNK1D-221ENST00000582844 DPY19L2Q6NUT2 758 aa27.74■■■□□ 2.03
CSNK1D-221ENST00000582844 PPP1R42Q7Z4L9 355 aa27.74■■■□□ 2.03
CSNK1D-221ENST00000582844 MBIPQ9NS73 344 aa27.74■■■□□ 2.03
CSNK1D-221ENST00000582844 HDGFL1Q5TGJ6 251 aa27.73■■■□□ 2.03
CSNK1D-221ENST00000582844 CHPF2Q9P2E5 772 aa27.73■■■□□ 2.03
CSNK1D-221ENST00000582844 ZNF853P0CG23 659 aa27.72■■■□□ 2.03
CSNK1D-221ENST00000582844 VEGFAP15692 232 aaPredicted RBP27.72■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms