RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 BICDL1Q6ZP65 573 aa10.44□□□□□ -0.74
CCDC47-205ENST00000582331 SLC52A2Q9HAB3 445 aa10.44□□□□□ -0.74
CCDC47-205ENST00000582331 ZBTB1Q9Y2K1 713 aa10.44□□□□□ -0.74
CCDC47-205ENST00000582331 CARMIL3Q8ND23 1372 aa10.43□□□□□ -0.74
CCDC47-205ENST00000582331 IQCA1LA6NCM1 817 aa10.43□□□□□ -0.74
CCDC47-205ENST00000582331 TMEM88BA6NKF7 163 aa10.43□□□□□ -0.74
CCDC47-205ENST00000582331 LBX1P52954 281 aa10.43□□□□□ -0.74
CCDC47-205ENST00000582331 SLC39A6Q13433 755 aa10.43□□□□□ -0.74
CCDC47-205ENST00000582331 AKAP4Q5JQC9 854 aa10.43□□□□□ -0.74
CCDC47-205ENST00000582331 LDHDQ86WU2 507 aa10.43□□□□□ -0.74
CCDC47-205ENST00000582331 POLR3GLQ9BT43 218 aa10.43□□□□□ -0.74
CCDC47-205ENST00000582331 BRIP1Q9BX63 1249 aa10.43□□□□□ -0.74
CCDC47-205ENST00000582331 TAOK3Q9H2K8 898 aa10.43□□□□□ -0.74
CCDC47-205ENST00000582331 PASKQ96RG2 1323 aa10.42□□□□□ -0.74
CCDC47-205ENST00000582331 LTBP3Q9NS15 1303 aa10.42□□□□□ -0.74
CCDC47-205ENST00000582331 CANXP27824 592 aaKnown RBP10.42□□□□□ -0.74
CCDC47-205ENST00000582331 LHX8Q68G74 356 aa10.42□□□□□ -0.74
CCDC47-205ENST00000582331 KIF12Q96FN5 646 aa10.42□□□□□ -0.74
CCDC47-205ENST00000582331 MS4A3Q96HJ5 214 aa10.42□□□□□ -0.74
CCDC47-205ENST00000582331 LGR6Q9HBX8 967 aa10.42□□□□□ -0.74
CCDC47-205ENST00000582331 WBP1LQ9NX94 342 aa10.42□□□□□ -0.74
CCDC47-205ENST00000582331 DICER1Q9UPY3 1922 aaKnown RBP10.41□□□□□ -0.74
CCDC47-205ENST00000582331 A0A087WZG4 1122 aa10.41□□□□□ -0.74
CCDC47-205ENST00000582331 STARD3NLO95772 234 aa10.41□□□□□ -0.74
CCDC47-205ENST00000582331 ITGBL1O95965 494 aaPredicted RBP10.41□□□□□ -0.74
CCDC47-205ENST00000582331 VASPP50552 380 aaPredicted RBP10.41□□□□□ -0.74
CCDC47-205ENST00000582331 FAM161AQ3B820 660 aa10.41□□□□□ -0.74
CCDC47-205ENST00000582331 TBC1D9BQ66K14 1250 aa10.41□□□□□ -0.74
CCDC47-205ENST00000582331 VSIG10Q8N0Z9 540 aa10.41□□□□□ -0.74
CCDC47-205ENST00000582331 ABHD8Q96I13 439 aa10.41□□□□□ -0.74
CCDC47-205ENST00000582331 TAF1DQ9H5J8 278 aaPredicted RBP10.41□□□□□ -0.74
CCDC47-205ENST00000582331 SCN11AQ9UI33 1791 aa10.41□□□□□ -0.74
CCDC47-205ENST00000582331 RNMTO43148 476 aaKnown RBP10.4□□□□□ -0.74
CCDC47-205ENST00000582331 EIF5P55010 431 aaKnown RBP10.4□□□□□ -0.74
CCDC47-205ENST00000582331 DEFB115Q30KQ5 88 aa10.4□□□□□ -0.74
CCDC47-205ENST00000582331 SOGA3Q5TF21 947 aa10.4□□□□□ -0.74
CCDC47-205ENST00000582331 PRR5LQ6MZQ0 368 aa10.4□□□□□ -0.74
CCDC47-205ENST00000582331 CCDC24Q8N4L8 307 aa10.4□□□□□ -0.74
CCDC47-205ENST00000582331 CNKSR1Q969H4 720 aa10.4□□□□□ -0.74
CCDC47-205ENST00000582331 FAM212AQ96EL1 285 aa10.4□□□□□ -0.74
CCDC47-205ENST00000582331 FER1L6Q2WGJ9 1857 aa10.4□□□□□ -0.75
CCDC47-205ENST00000582331 NPHP1O15259 732 aa10.39□□□□□ -0.75
CCDC47-205ENST00000582331 HSPA8P11142 646 aaKnown RBP10.39□□□□□ -0.75
CCDC47-205ENST00000582331 EAPPQ56P03 285 aaPredicted RBP10.39□□□□□ -0.75
CCDC47-205ENST00000582331 STYK1Q6J9G0 422 aa10.39□□□□□ -0.75
CCDC47-205ENST00000582331 L3MBTL3Q96JM7 780 aaPredicted RBP10.39□□□□□ -0.75
CCDC47-205ENST00000582331 PCDH10Q9P2E7 1040 aa10.39□□□□□ -0.75
CCDC47-205ENST00000582331 RASSF10A6NK89 507 aa10.38□□□□□ -0.75
CCDC47-205ENST00000582331 IL13P35225 146 aa10.38□□□□□ -0.75
CCDC47-205ENST00000582331 MAP2K1Q02750 393 aaPredicted RBP10.38□□□□□ -0.75
CCDC47-205ENST00000582331 PRPF40BQ6NWY9 871 aaKnown RBP10.38□□□□□ -0.75
CCDC47-205ENST00000582331 MORC1Q86VD1 984 aa10.38□□□□□ -0.75
CCDC47-205ENST00000582331 PANK3Q9H999 370 aa10.38□□□□□ -0.75
CCDC47-205ENST00000582331 TBC1D2BQ9UPU7 963 aa10.38□□□□□ -0.75
CCDC47-205ENST00000582331 ANKRD31Q8N7Z5 1873 aa10.38□□□□□ -0.75
CCDC47-205ENST00000582331 CCDC85CA6NKD9 419 aa10.37□□□□□ -0.75
CCDC47-205ENST00000582331 SRGNP10124 158 aa10.37□□□□□ -0.75
CCDC47-205ENST00000582331 ST5P78524 1137 aa10.37□□□□□ -0.75
CCDC47-205ENST00000582331 MLLT1Q03111 559 aaPredicted RBP10.37□□□□□ -0.75
CCDC47-205ENST00000582331 TTC5Q8N0Z6 440 aa10.37□□□□□ -0.75
CCDC47-205ENST00000582331 CNBD1Q8NA66 436 aa10.37□□□□□ -0.75
CCDC47-205ENST00000582331 MASTLQ96GX5 879 aa10.37□□□□□ -0.75
CCDC47-205ENST00000582331 SETDB2Q96T68 719 aa10.37□□□□□ -0.75
CCDC47-205ENST00000582331 HACL1Q9UJ83 578 aa10.37□□□□□ -0.75
CCDC47-205ENST00000582331 SCN4AP35499 1836 aa10.37□□□□□ -0.75
CCDC47-205ENST00000582331 VIRMAQ69YN4 1812 aaKnown RBP10.37□□□□□ -0.75
CCDC47-205ENST00000582331 WDR33Q9C0J8 1336 aaKnown RBP10.36□□□□□ -0.75
CCDC47-205ENST00000582331 MAP3K13O43283 966 aa10.36□□□□□ -0.75
CCDC47-205ENST00000582331 EPHX2P34913 555 aa10.36□□□□□ -0.75
CCDC47-205ENST00000582331 CCDC93Q567U6 631 aa10.36□□□□□ -0.75
CCDC47-205ENST00000582331 ASTLQ6HA08 431 aaPredicted RBP10.36□□□□□ -0.75
CCDC47-205ENST00000582331 NPM2Q86SE8 214 aaKnown RBP10.36□□□□□ -0.75
CCDC47-205ENST00000582331 PNMA8AQ86V59 439 aaPredicted RBP10.36□□□□□ -0.75
CCDC47-205ENST00000582331 CNTROBQ8N137 903 aa10.36□□□□□ -0.75
CCDC47-205ENST00000582331 TEX13AQ9BXU3 409 aaPredicted RBP10.36□□□□□ -0.75
CCDC47-205ENST00000582331 ZNF330Q9Y3S2 320 aaPredicted RBP10.36□□□□□ -0.75
CCDC47-205ENST00000582331 MRC1P22897 1456 aa10.36□□□□□ -0.75
CCDC47-205ENST00000582331 COL11A2P13942 1736 aaPredicted RBP10.36□□□□□ -0.75
CCDC47-205ENST00000582331 SLX4Q8IY92 1834 aa10.35□□□□□ -0.75
CCDC47-205ENST00000582331 IL6STP40189 918 aaPredicted RBP10.35□□□□□ -0.75
CCDC47-205ENST00000582331 RGS19P49795 217 aa10.35□□□□□ -0.75
CCDC47-205ENST00000582331 MTHFSDQ2M296 383 aaKnown RBP10.35□□□□□ -0.75
CCDC47-205ENST00000582331 MAP1SQ66K74 1059 aaPredicted RBP10.35□□□□□ -0.75
CCDC47-205ENST00000582331 C7orf43Q8WVR3 580 aa10.35□□□□□ -0.75
CCDC47-205ENST00000582331 ABT1Q9ULW3 272 aaKnown RBP10.35□□□□□ -0.75
CCDC47-205ENST00000582331 ZNF541Q9H0D2 1346 aa10.34□□□□□ -0.75
CCDC47-205ENST00000582331 HMOX1P09601 288 aa10.34□□□□□ -0.75
CCDC47-205ENST00000582331 FKBP4Q02790 459 aaKnown RBP eCLIP10.34□□□□□ -0.75
CCDC47-205ENST00000582331 BEGAINQ9BUH8 593 aa10.34□□□□□ -0.75
CCDC47-205ENST00000582331 ZNF277Q9NRM2 450 aaPredicted RBP10.34□□□□□ -0.75
CCDC47-205ENST00000582331 ATMINO43313 823 aaPredicted RBP10.33□□□□□ -0.76
CCDC47-205ENST00000582331 CAMTA2O94983 1202 aa10.33□□□□□ -0.76
CCDC47-205ENST00000582331 NPR1P16066 1061 aa10.33□□□□□ -0.76
CCDC47-205ENST00000582331 RTKN2Q8IZC4 609 aa10.33□□□□□ -0.76
CCDC47-205ENST00000582331 ZNF496Q96IT1 587 aaPredicted RBP10.33□□□□□ -0.76
CCDC47-205ENST00000582331 HEG1Q9ULI3 1381 aa10.33□□□□□ -0.76
CCDC47-205ENST00000582331 CACNA1SQ13698 1873 aa10.32□□□□□ -0.76
CCDC47-205ENST00000582331 A1BGP04217 495 aa10.32□□□□□ -0.76
CCDC47-205ENST00000582331 ECE1P42892 770 aa10.32□□□□□ -0.76
CCDC47-205ENST00000582331 TEFQ10587 303 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 608.5 ms