RNA–Protein interactions for RNA: ENST00000581204.1

SUPT4H1-206, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2

Gene SUPT4H1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-206ENST00000581204 ZNF710Q8N1W2 664 aa11.28□□□□□ -0.6
SUPT4H1-206ENST00000581204 ZNF454Q8N9F8 522 aa11.28□□□□□ -0.6
SUPT4H1-206ENST00000581204 KIF20BQ96Q89 1820 aa11.28□□□□□ -0.6
SUPT4H1-206ENST00000581204 EDC4Q6P2E9 1401 aaKnown RBP11.27□□□□□ -0.6
SUPT4H1-206ENST00000581204 C5P01031 1676 aa11.27□□□□□ -0.6
SUPT4H1-206ENST00000581204 MON2Q7Z3U7 1717 aa11.27□□□□□ -0.61
SUPT4H1-206ENST00000581204 OATP04181 439 aa11.27□□□□□ -0.61
SUPT4H1-206ENST00000581204 CSB-PGBD3P0DP91 1061 aa11.27□□□□□ -0.61
SUPT4H1-206ENST00000581204 PPP2R1AP30153 589 aa11.27□□□□□ -0.61
SUPT4H1-206ENST00000581204 TSR1Q2NL82 804 aaKnown RBP11.27□□□□□ -0.61
SUPT4H1-206ENST00000581204 FAM9BQ8IZU0 186 aa11.27□□□□□ -0.61
SUPT4H1-206ENST00000581204 FAM117AQ9C073 453 aa11.27□□□□□ -0.61
SUPT4H1-206ENST00000581204 HOXB3P14651 431 aaPredicted RBP11.26□□□□□ -0.61
SUPT4H1-206ENST00000581204 TNNT2P45379 298 aaPredicted RBP11.26□□□□□ -0.61
SUPT4H1-206ENST00000581204 FAM161AQ3B820 660 aa11.26□□□□□ -0.61
SUPT4H1-206ENST00000581204 C6orf132Q5T0Z8 1188 aa11.26□□□□□ -0.61
SUPT4H1-206ENST00000581204 GGNBP2Q9H3C7 697 aa11.26□□□□□ -0.61
SUPT4H1-206ENST00000581204 GOPCQ9HD26 462 aa11.26□□□□□ -0.61
SUPT4H1-206ENST00000581204 PKD1L3Q7Z443 1732 aa11.26□□□□□ -0.61
SUPT4H1-206ENST00000581204 PXDNLA1KZ92 1463 aa11.25□□□□□ -0.61
SUPT4H1-206ENST00000581204 SNPHO15079 494 aa11.25□□□□□ -0.61
SUPT4H1-206ENST00000581204 FYB1O15117 783 aa11.25□□□□□ -0.61
SUPT4H1-206ENST00000581204 NUDT7P0C024 238 aa11.25□□□□□ -0.61
SUPT4H1-206ENST00000581204 GIGYF2Q6Y7W6 1299 aaKnown RBP11.25□□□□□ -0.61
SUPT4H1-206ENST00000581204 ANKRD26Q9UPS8 1709 aa11.25□□□□□ -0.61
SUPT4H1-206ENST00000581204 KIF13BQ9NQT8 1826 aa11.25□□□□□ -0.61
SUPT4H1-206ENST00000581204 KCPQ6ZWJ8 1503 aa11.25□□□□□ -0.61
SUPT4H1-206ENST00000581204 CENPBP07199 599 aaPredicted RBP11.24□□□□□ -0.61
SUPT4H1-206ENST00000581204 IL2RBP14784 551 aa11.24□□□□□ -0.61
SUPT4H1-206ENST00000581204 ARSIQ5FYB1 569 aa11.24□□□□□ -0.61
SUPT4H1-206ENST00000581204 AMIGO3Q86WK7 504 aa11.24□□□□□ -0.61
SUPT4H1-206ENST00000581204 ERBB3P21860 1342 aa11.24□□□□□ -0.61
SUPT4H1-206ENST00000581204 TNRC6CQ9HCJ0 1690 aaKnown RBP11.24□□□□□ -0.61
SUPT4H1-206ENST00000581204 TAF1LQ8IZX4 1826 aa11.23□□□□□ -0.61
SUPT4H1-206ENST00000581204 PPP4R3BQ5MIZ7 849 aa11.23□□□□□ -0.61
SUPT4H1-206ENST00000581204 GPR153Q6NV75 609 aa11.23□□□□□ -0.61
SUPT4H1-206ENST00000581204 NME9Q86XW9 330 aa11.23□□□□□ -0.61
SUPT4H1-206ENST00000581204 COG3Q96JB2 828 aa11.23□□□□□ -0.61
SUPT4H1-206ENST00000581204 GPCPD1Q9NPB8 672 aa11.23□□□□□ -0.61
SUPT4H1-206ENST00000581204 CCNL1Q9UK58 526 aaPredicted RBP11.23□□□□□ -0.61
SUPT4H1-206ENST00000581204 TTC21BQ7Z4L5 1316 aa11.22□□□□□ -0.61
SUPT4H1-206ENST00000581204 PNISRQ8TF01 805 aaKnown RBP11.22□□□□□ -0.61
SUPT4H1-206ENST00000581204 BRCA1P38398 1863 aaKnown RBP11.21□□□□□ -0.61
SUPT4H1-206ENST00000581204 N4BP2Q86UW6 1770 aaPredicted RBP11.21□□□□□ -0.61
SUPT4H1-206ENST00000581204 TTC21AQ8NDW8 1320 aa11.21□□□□□ -0.61
SUPT4H1-206ENST00000581204 CFAP53Q96M91 514 aa11.21□□□□□ -0.61
SUPT4H1-206ENST00000581204 KAT6BQ8WYB5 2073 aa11.2□□□□□ -0.62
SUPT4H1-206ENST00000581204 PLEKHG2Q9H7P9 1386 aa11.2□□□□□ -0.62
SUPT4H1-206ENST00000581204 POTEJP0CG39 1038 aa11.2□□□□□ -0.62
SUPT4H1-206ENST00000581204 WDR43Q15061 677 aaKnown RBP eCLIP11.2□□□□□ -0.62
SUPT4H1-206ENST00000581204 C16orf71Q8IYS4 520 aaPredicted RBP11.2□□□□□ -0.62
SUPT4H1-206ENST00000581204 KCNH5Q8NCM2 988 aa11.2□□□□□ -0.62
SUPT4H1-206ENST00000581204 UBR3Q6ZT12 1888 aa11.2□□□□□ -0.62
SUPT4H1-206ENST00000581204 C4BP0C0L5 1744 aa11.2□□□□□ -0.62
SUPT4H1-206ENST00000581204 MTHFSP49914 203 aa11.19□□□□□ -0.62
SUPT4H1-206ENST00000581204 HNRNPUQ00839 825 aaKnown RBP eCLIP11.19□□□□□ -0.62
SUPT4H1-206ENST00000581204 PADI6Q6TGC4 694 aa11.19□□□□□ -0.62
SUPT4H1-206ENST00000581204 METTL3Q86U44 580 aaKnown RBP11.19□□□□□ -0.62
SUPT4H1-206ENST00000581204 TMUB1Q9BVT8 246 aa11.19□□□□□ -0.62
SUPT4H1-206ENST00000581204 ADAM33Q9BZ11 813 aa11.19□□□□□ -0.62
SUPT4H1-206ENST00000581204 FOXN1O15353 648 aa11.18□□□□□ -0.62
SUPT4H1-206ENST00000581204 MDM2Q00987 491 aaPredicted RBP11.18□□□□□ -0.62
SUPT4H1-206ENST00000581204 TTC13Q8NBP0 860 aa11.18□□□□□ -0.62
SUPT4H1-206ENST00000581204 SMC1BQ8NDV3 1235 aa11.18□□□□□ -0.62
SUPT4H1-206ENST00000581204 NLRP2Q9NX02 1062 aa11.18□□□□□ -0.62
SUPT4H1-206ENST00000581204 LTN1O94822 1766 aa11.18□□□□□ -0.62
SUPT4H1-206ENST00000581204 FAM208AQ9UK61 1670 aaKnown RBP11.17□□□□□ -0.62
SUPT4H1-206ENST00000581204 MAP2P11137 1827 aaKnown RBP11.17□□□□□ -0.62
SUPT4H1-206ENST00000581204 PPM1GO15355 546 aaPredicted RBP11.17□□□□□ -0.62
SUPT4H1-206ENST00000581204 PRSS12P56730 875 aa11.17□□□□□ -0.62
SUPT4H1-206ENST00000581204 C9orf131Q5VYM1 1079 aa11.17□□□□□ -0.62
SUPT4H1-206ENST00000581204 SMIM5Q71RC9 77 aa11.17□□□□□ -0.62
SUPT4H1-206ENST00000581204 DDX54Q8TDD1 881 aaKnown RBP11.17□□□□□ -0.62
SUPT4H1-206ENST00000581204 SYTL4Q96C24 671 aaPredicted RBP11.17□□□□□ -0.62
SUPT4H1-206ENST00000581204 RRAGCQ9HB90 399 aa11.17□□□□□ -0.62
SUPT4H1-206ENST00000581204 PRDM10Q9NQV6 1147 aa11.17□□□□□ -0.62
SUPT4H1-206ENST00000581204 ADGRG1Q9Y653 693 aa11.17□□□□□ -0.62
SUPT4H1-206ENST00000581204 POTEB2H3BUK9 544 aa11.16□□□□□ -0.62
SUPT4H1-206ENST00000581204 FLAD1Q8NFF5 587 aa11.16□□□□□ -0.62
SUPT4H1-206ENST00000581204 PXYLP1Q8TE99 480 aa11.16□□□□□ -0.62
SUPT4H1-206ENST00000581204 KHSRPQ92945 711 aaKnown RBP eCLIP11.16□□□□□ -0.62
SUPT4H1-206ENST00000581204 RSPH6AQ9H0K4 717 aa11.16□□□□□ -0.62
SUPT4H1-206ENST00000581204 BCL2L12Q9HB09 334 aa11.16□□□□□ -0.62
SUPT4H1-206ENST00000581204 ARFGEF1Q9Y6D6 1849 aa11.16□□□□□ -0.62
SUPT4H1-206ENST00000581204 MS4A1P11836 297 aa11.15□□□□□ -0.62
SUPT4H1-206ENST00000581204 LHX6Q9UPM6 363 aa11.15□□□□□ -0.62
SUPT4H1-206ENST00000581204 BCS1LQ9Y276 419 aa11.15□□□□□ -0.62
SUPT4H1-206ENST00000581204 KDM2BQ8NHM5 1336 aa11.14□□□□□ -0.63
SUPT4H1-206ENST00000581204 PTPREP23469 700 aa11.14□□□□□ -0.63
SUPT4H1-206ENST00000581204 ARHGAP27Q6ZUM4 889 aa11.14□□□□□ -0.63
SUPT4H1-206ENST00000581204 ANKRD24Q8TF21 1146 aa11.14□□□□□ -0.63
SUPT4H1-206ENST00000581204 CDCA7LQ96GN5 454 aa11.14□□□□□ -0.63
SUPT4H1-206ENST00000581204 PCMTD1Q96MG8 357 aaPredicted RBP11.14□□□□□ -0.63
SUPT4H1-206ENST00000581204 ADAMTS8Q9UP79 889 aa11.14□□□□□ -0.63
SUPT4H1-206ENST00000581204 NUDCQ9Y266 331 aa11.14□□□□□ -0.63
SUPT4H1-206ENST00000581204 TNRC18O15417 2968 aaPredicted RBP11.14□□□□□ -0.63
SUPT4H1-206ENST00000581204 USP31Q70CQ4 1352 aa11.14□□□□□ -0.63
SUPT4H1-206ENST00000581204 PPP1R3GB7ZBB8 358 aa11.13□□□□□ -0.63
SUPT4H1-206ENST00000581204 FBLN1P23142 703 aa11.13□□□□□ -0.63
SUPT4H1-206ENST00000581204 SSTR3P32745 418 aaPredicted RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms