RNA–Protein interactions for RNA: ENST00000580972.1

RNU4ATAC-201, Transcript of RNA, U4atac small nuclear (U12-dependent splicing), humanhuman

BASIC

Gene RNU4ATAC, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC-201ENST00000580972 GNAI2P04899 355 aa7.73□□□□□ -1.17
RNU4ATAC-201ENST00000580972 UBTFL1P0CB47 393 aaPredicted RBP7.73□□□□□ -1.17
RNU4ATAC-201ENST00000580972 RTL5Q5HYW3 569 aaPredicted RBP7.73□□□□□ -1.17
RNU4ATAC-201ENST00000580972 LINS1Q8NG48 757 aa7.73□□□□□ -1.17
RNU4ATAC-201ENST00000580972 PLBD2Q8NHP8 589 aa7.73□□□□□ -1.17
RNU4ATAC-201ENST00000580972 SMARCC1Q92922 1105 aaPredicted RBP7.73□□□□□ -1.17
RNU4ATAC-201ENST00000580972 KAZALD1Q96I82 304 aa7.73□□□□□ -1.17
RNU4ATAC-201ENST00000580972 RWDD1Q9H446 243 aaPredicted RBP7.73□□□□□ -1.17
RNU4ATAC-201ENST00000580972 LRRC4BQ9NT99 713 aa7.73□□□□□ -1.17
RNU4ATAC-201ENST00000580972 TBC1D2BQ9UPU7 963 aa7.73□□□□□ -1.17
RNU4ATAC-201ENST00000580972 PXDNLA1KZ92 1463 aa7.73□□□□□ -1.17
RNU4ATAC-201ENST00000580972 DOT1LQ8TEK3 1739 aa7.72□□□□□ -1.17
RNU4ATAC-201ENST00000580972 ALDH1L1O75891 902 aa7.72□□□□□ -1.17
RNU4ATAC-201ENST00000580972 GNAI3P08754 354 aa7.72□□□□□ -1.17
RNU4ATAC-201ENST00000580972 GPTP24298 496 aa7.72□□□□□ -1.17
RNU4ATAC-201ENST00000580972 RXRBP28702 533 aa7.72□□□□□ -1.17
RNU4ATAC-201ENST00000580972 AAMPQ13685 434 aa7.72□□□□□ -1.17
RNU4ATAC-201ENST00000580972 GCKRQ14397 625 aa7.72□□□□□ -1.17
RNU4ATAC-201ENST00000580972 SMC5Q8IY18 1101 aa7.72□□□□□ -1.17
RNU4ATAC-201ENST00000580972 SYNE4Q8N205 404 aa7.72□□□□□ -1.17
RNU4ATAC-201ENST00000580972 OTUD7AQ8TE49 926 aaPredicted RBP7.72□□□□□ -1.17
RNU4ATAC-201ENST00000580972 TEX13AQ9BXU3 409 aaPredicted RBP7.72□□□□□ -1.17
RNU4ATAC-201ENST00000580972 TSHZ2Q9NRE2 1034 aa7.72□□□□□ -1.17
RNU4ATAC-201ENST00000580972 CCNL1Q9UK58 526 aaPredicted RBP7.72□□□□□ -1.17
RNU4ATAC-201ENST00000580972 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.72□□□□□ -1.17
RNU4ATAC-201ENST00000580972 GRM8O00222 908 aa7.71□□□□□ -1.18
RNU4ATAC-201ENST00000580972 EIF5P55010 431 aaKnown RBP7.71□□□□□ -1.18
RNU4ATAC-201ENST00000580972 CASP7P55210 303 aa7.71□□□□□ -1.18
RNU4ATAC-201ENST00000580972 UBE3BQ7Z3V4 1068 aa7.71□□□□□ -1.18
RNU4ATAC-201ENST00000580972 PPP1R42Q7Z4L9 355 aa7.71□□□□□ -1.18
RNU4ATAC-201ENST00000580972 DZIP3Q86Y13 1208 aaKnown RBP7.71□□□□□ -1.18
RNU4ATAC-201ENST00000580972 C16orf71Q8IYS4 520 aaPredicted RBP7.71□□□□□ -1.18
RNU4ATAC-201ENST00000580972 CHMP4AQ9BY43 222 aa7.71□□□□□ -1.18
RNU4ATAC-201ENST00000580972 LNPKQ9C0E8 428 aa7.71□□□□□ -1.18
RNU4ATAC-201ENST00000580972 BCL11BQ9C0K0 894 aaPredicted RBP7.71□□□□□ -1.18
RNU4ATAC-201ENST00000580972 BICC1Q9H694 974 aaKnown RBP7.71□□□□□ -1.18
RNU4ATAC-201ENST00000580972 C9orf78Q9NZ63 289 aaPredicted RBP7.71□□□□□ -1.18
RNU4ATAC-201ENST00000580972 SRP68Q9UHB9 627 aaKnown RBP7.71□□□□□ -1.18
RNU4ATAC-201ENST00000580972 PA2G4Q9UQ80 394 aaKnown RBP7.71□□□□□ -1.18
RNU4ATAC-201ENST00000580972 MAP3K15Q6ZN16 1313 aa7.71□□□□□ -1.18
RNU4ATAC-201ENST00000580972 A0A087WZG4 1122 aa7.7□□□□□ -1.18
RNU4ATAC-201ENST00000580972 CAMTA2O94983 1202 aa7.7□□□□□ -1.18
RNU4ATAC-201ENST00000580972 ATP8B2P98198 1209 aa7.7□□□□□ -1.18
RNU4ATAC-201ENST00000580972 NUCB1Q02818 461 aa7.7□□□□□ -1.18
RNU4ATAC-201ENST00000580972 ANKRD45Q5TZF3 282 aa7.7□□□□□ -1.18
RNU4ATAC-201ENST00000580972 KIF6Q6ZMV9 814 aa7.7□□□□□ -1.18
RNU4ATAC-201ENST00000580972 FAM196AQ6ZSG2 479 aa7.7□□□□□ -1.18
RNU4ATAC-201ENST00000580972 ISCA1Q9BUE6 129 aa7.7□□□□□ -1.18
RNU4ATAC-201ENST00000580972 EXOC6BQ9Y2D4 811 aa7.7□□□□□ -1.18
RNU4ATAC-201ENST00000580972 UBN2Q6ZU65 1347 aa7.7□□□□□ -1.18
RNU4ATAC-201ENST00000580972 UBR2Q8IWV8 1755 aa7.69□□□□□ -1.18
RNU4ATAC-201ENST00000580972 FAM177BA6PVY3 158 aa7.69□□□□□ -1.18
RNU4ATAC-201ENST00000580972 GNPATO15228 680 aa7.69□□□□□ -1.18
RNU4ATAC-201ENST00000580972 PHF14O94880 888 aa7.69□□□□□ -1.18
RNU4ATAC-201ENST00000580972 IL6STP40189 918 aaPredicted RBP7.69□□□□□ -1.18
RNU4ATAC-201ENST00000580972 NEXNQ0ZGT2 675 aa7.69□□□□□ -1.18
RNU4ATAC-201ENST00000580972 TCIRG1Q13488 830 aa7.69□□□□□ -1.18
RNU4ATAC-201ENST00000580972 POLA2Q14181 598 aa7.69□□□□□ -1.18
RNU4ATAC-201ENST00000580972 RPAP2Q8IXW5 612 aaPredicted RBP7.69□□□□□ -1.18
RNU4ATAC-201ENST00000580972 PROM2Q8N271 834 aa7.69□□□□□ -1.18
RNU4ATAC-201ENST00000580972 KLHDC4Q8TBB5 520 aa7.69□□□□□ -1.18
RNU4ATAC-201ENST00000580972 CHMP4BQ9H444 224 aaKnown RBP7.69□□□□□ -1.18
RNU4ATAC-201ENST00000580972 DCTPP1Q9H773 170 aa7.69□□□□□ -1.18
RNU4ATAC-201ENST00000580972 CWC25Q9NXE8 425 aaPredicted RBP7.69□□□□□ -1.18
RNU4ATAC-201ENST00000580972 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.69□□□□□ -1.18
RNU4ATAC-201ENST00000580972 UTYO14607 1347 aa7.69□□□□□ -1.18
RNU4ATAC-201ENST00000580972 H7C1W4 665 aa7.68□□□□□ -1.18
RNU4ATAC-201ENST00000580972 SRGAP3O43295 1099 aa7.68□□□□□ -1.18
RNU4ATAC-201ENST00000580972 TSHZ3Q63HK5 1081 aa7.68□□□□□ -1.18
RNU4ATAC-201ENST00000580972 GIGYF2Q6Y7W6 1299 aaKnown RBP7.68□□□□□ -1.18
RNU4ATAC-201ENST00000580972 NLRP10Q86W26 655 aa7.68□□□□□ -1.18
RNU4ATAC-201ENST00000580972 CHD1LQ86WJ1 897 aa7.68□□□□□ -1.18
RNU4ATAC-201ENST00000580972 SSH3Q8TE77 659 aa7.68□□□□□ -1.18
RNU4ATAC-201ENST00000580972 FAM89AQ96GI7 184 aa7.68□□□□□ -1.18
RNU4ATAC-201ENST00000580972 CCDC85AQ96PX6 553 aaPredicted RBP7.68□□□□□ -1.18
RNU4ATAC-201ENST00000580972 BCL2L12Q9HB09 334 aa7.68□□□□□ -1.18
RNU4ATAC-201ENST00000580972 TJP1Q07157 1748 aa7.68□□□□□ -1.18
RNU4ATAC-201ENST00000580972 CNTNAP4Q9C0A0 1308 aa7.68□□□□□ -1.18
RNU4ATAC-201ENST00000580972 COL15A1P39059 1388 aa7.68□□□□□ -1.18
RNU4ATAC-201ENST00000580972 RFX5P48382 616 aaPredicted RBP7.67□□□□□ -1.18
RNU4ATAC-201ENST00000580972 FOXO4P98177 505 aa7.67□□□□□ -1.18
RNU4ATAC-201ENST00000580972 ZNF827Q17R98 1081 aa7.67□□□□□ -1.18
RNU4ATAC-201ENST00000580972 SUSD4Q5VX71 490 aa7.67□□□□□ -1.18
RNU4ATAC-201ENST00000580972 BICDL1Q6ZP65 573 aa7.67□□□□□ -1.18
RNU4ATAC-201ENST00000580972 ILDR1Q86SU0 546 aaPredicted RBP7.67□□□□□ -1.18
RNU4ATAC-201ENST00000580972 CCDC24Q8N4L8 307 aa7.67□□□□□ -1.18
RNU4ATAC-201ENST00000580972 IL1RAPL2Q9NP60 686 aa7.67□□□□□ -1.18
RNU4ATAC-201ENST00000580972 HMMRO75330 724 aa7.66□□□□□ -1.18
RNU4ATAC-201ENST00000580972 RPS6KA4O75676 772 aa7.66□□□□□ -1.18
RNU4ATAC-201ENST00000580972 SURF6O75683 361 aaKnown RBP7.66□□□□□ -1.18
RNU4ATAC-201ENST00000580972 APBA3O96018 575 aa7.66□□□□□ -1.18
RNU4ATAC-201ENST00000580972 MTX1Q13505 466 aa7.66□□□□□ -1.18
RNU4ATAC-201ENST00000580972 TXNRD1Q16881 649 aa7.66□□□□□ -1.18
RNU4ATAC-201ENST00000580972 USPL1Q5W0Q7 1092 aa7.66□□□□□ -1.18
RNU4ATAC-201ENST00000580972 LMBR1LQ6UX01 489 aa7.66□□□□□ -1.18
RNU4ATAC-201ENST00000580972 C3orf67Q6ZVT6 689 aa7.66□□□□□ -1.18
RNU4ATAC-201ENST00000580972 ZNF34Q8IZ26 560 aa7.66□□□□□ -1.18
RNU4ATAC-201ENST00000580972 CCDC191Q8NCU4 936 aa7.66□□□□□ -1.18
RNU4ATAC-201ENST00000580972 ARHGEF1Q92888 912 aaKnown RBP7.66□□□□□ -1.18
RNU4ATAC-201ENST00000580972 GCC1Q96CN9 775 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms