RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 NBPF15Q8N660 670 aa12.83□□□□□ -0.36
GGA3-209ENST00000580646 MBIPQ9NS73 344 aa12.83□□□□□ -0.36
GGA3-209ENST00000580646 SETDB2Q96T68 719 aa12.82□□□□□ -0.36
GGA3-209ENST00000580646 CLEC4GQ6UXB4 293 aa12.81□□□□□ -0.36
GGA3-209ENST00000580646 LAS1LQ9Y4W2 734 aaKnown RBP12.81□□□□□ -0.36
GGA3-209ENST00000580646 KIAA1551Q9HCM1 1747 aa12.81□□□□□ -0.36
GGA3-209ENST00000580646 ERBB4Q15303 1308 aa12.81□□□□□ -0.36
GGA3-209ENST00000580646 N4BP2Q86UW6 1770 aaPredicted RBP12.81□□□□□ -0.36
GGA3-209ENST00000580646 BCORQ6W2J9 1755 aa12.8□□□□□ -0.36
GGA3-209ENST00000580646 GOLGA2Q08379 1002 aa12.8□□□□□ -0.36
GGA3-209ENST00000580646 PRR5LQ6MZQ0 368 aa12.8□□□□□ -0.36
GGA3-209ENST00000580646 CHMP4AQ9BY43 222 aa12.8□□□□□ -0.36
GGA3-209ENST00000580646 MYH16Q9H6N6 1097 aa12.8□□□□□ -0.36
GGA3-209ENST00000580646 SALL2Q9Y467 1007 aaPredicted RBP12.8□□□□□ -0.36
GGA3-209ENST00000580646 CARMIL3Q8ND23 1372 aa12.8□□□□□ -0.36
GGA3-209ENST00000580646 SCN7AQ01118 1682 aa12.8□□□□□ -0.36
GGA3-209ENST00000580646 ATP10DQ9P241 1426 aa12.79□□□□□ -0.36
GGA3-209ENST00000580646 H0YIN7 160 aa12.79□□□□□ -0.36
GGA3-209ENST00000580646 RGL2O15211 777 aa12.79□□□□□ -0.36
GGA3-209ENST00000580646 C2CD5Q86YS7 1000 aa12.79□□□□□ -0.36
GGA3-209ENST00000580646 CCDC24Q8N4L8 307 aa12.79□□□□□ -0.36
GGA3-209ENST00000580646 BRIP1Q9BX63 1249 aa12.79□□□□□ -0.36
GGA3-209ENST00000580646 ZNF652Q9Y2D9 606 aa12.79□□□□□ -0.36
GGA3-209ENST00000580646 FANCIQ9NVI1 1328 aa12.79□□□□□ -0.36
GGA3-209ENST00000580646 ADCY9O60503 1353 aa12.79□□□□□ -0.36
GGA3-209ENST00000580646 E9PSI1 815 aa12.78□□□□□ -0.36
GGA3-209ENST00000580646 HSPA6P17066 643 aa12.78□□□□□ -0.36
GGA3-209ENST00000580646 PDE6BP35913 854 aa12.78□□□□□ -0.36
GGA3-209ENST00000580646 TTLL6Q8N841 843 aa12.78□□□□□ -0.36
GGA3-209ENST00000580646 CNBD1Q8NA66 436 aa12.78□□□□□ -0.36
GGA3-209ENST00000580646 PDZRN3Q9UPQ7 1066 aa12.78□□□□□ -0.36
GGA3-209ENST00000580646 ZBED9Q6R2W3 1325 aa12.78□□□□□ -0.36
GGA3-209ENST00000580646 NPHP1O15259 732 aa12.77□□□□□ -0.37
GGA3-209ENST00000580646 HNRNPUQ00839 825 aaKnown RBP eCLIP12.77□□□□□ -0.37
GGA3-209ENST00000580646 TRMT2AQ8IZ69 625 aaKnown RBP12.77□□□□□ -0.37
GGA3-209ENST00000580646 GPBP1L1Q9HC44 474 aaPredicted RBP12.77□□□□□ -0.37
GGA3-209ENST00000580646 NRXN2Q9P2S2 1712 aa12.76□□□□□ -0.37
GGA3-209ENST00000580646 MYL6BP14649 208 aa12.76□□□□□ -0.37
GGA3-209ENST00000580646 EIF2S2P20042 333 aaKnown RBP12.76□□□□□ -0.37
GGA3-209ENST00000580646 ST5P78524 1137 aa12.76□□□□□ -0.37
GGA3-209ENST00000580646 SLFN5Q08AF3 891 aa12.76□□□□□ -0.37
GGA3-209ENST00000580646 HLFQ16534 295 aa12.76□□□□□ -0.37
GGA3-209ENST00000580646 DUSP27Q5VZP5 1158 aa12.76□□□□□ -0.37
GGA3-209ENST00000580646 NBPF5PQ86XG9 351 aaPredicted RBP12.76□□□□□ -0.37
GGA3-209ENST00000580646 ZNF526Q8TF50 670 aaPredicted RBP12.76□□□□□ -0.37
GGA3-209ENST00000580646 TSR2Q969E8 191 aaKnown RBP12.76□□□□□ -0.37
GGA3-209ENST00000580646 SPINK5Q9NQ38 1064 aaPredicted RBP12.76□□□□□ -0.37
GGA3-209ENST00000580646 NIP7Q9Y221 180 aaKnown RBP eCLIP12.76□□□□□ -0.37
GGA3-209ENST00000580646 NUP98P52948 1817 aa12.76□□□□□ -0.37
GGA3-209ENST00000580646 AFDNP55196 1824 aaKnown RBP12.76□□□□□ -0.37
GGA3-209ENST00000580646 ERVV-1B6SEH8 477 aa12.75□□□□□ -0.37
GGA3-209ENST00000580646 C9orf131Q5VYM1 1079 aa12.75□□□□□ -0.37
GGA3-209ENST00000580646 TPTE2Q6XPS3 522 aa12.75□□□□□ -0.37
GGA3-209ENST00000580646 TTLL7Q6ZT98 887 aa12.75□□□□□ -0.37
GGA3-209ENST00000580646 C8orf58Q8NAV2 365 aa12.75□□□□□ -0.37
GGA3-209ENST00000580646 ZNF622Q969S3 477 aaKnown RBP eCLIP12.75□□□□□ -0.37
GGA3-209ENST00000580646 MAP3K15Q6ZN16 1313 aa12.74□□□□□ -0.37
GGA3-209ENST00000580646 KRT24Q2M2I5 525 aa12.74□□□□□ -0.37
GGA3-209ENST00000580646 KIF6Q6ZMV9 814 aa12.74□□□□□ -0.37
GGA3-209ENST00000580646 BRCA1P38398 1863 aaKnown RBP12.74□□□□□ -0.37
GGA3-209ENST00000580646 ANKRD36CQ5JPF3 1778 aa12.74□□□□□ -0.37
GGA3-209ENST00000580646 FAM177BA6PVY3 158 aa12.73□□□□□ -0.37
GGA3-209ENST00000580646 CT47B1P0C2W7 299 aaPredicted RBP12.73□□□□□ -0.37
GGA3-209ENST00000580646 PDIA6Q15084 440 aa12.73□□□□□ -0.37
GGA3-209ENST00000580646 TWISTNBQ3B726 338 aaPredicted RBP12.73□□□□□ -0.37
GGA3-209ENST00000580646 HDGFL1Q5TGJ6 251 aa12.73□□□□□ -0.37
GGA3-209ENST00000580646 DDX21Q9NR30 783 aaKnown RBP eCLIP12.73□□□□□ -0.37
GGA3-209ENST00000580646 DBF4Q9UBU7 674 aaPredicted RBP12.73□□□□□ -0.37
GGA3-209ENST00000580646 CAPN15O75808 1086 aa12.72□□□□□ -0.37
GGA3-209ENST00000580646 SRGNP10124 158 aa12.72□□□□□ -0.37
GGA3-209ENST00000580646 EXOSC9Q06265 439 aaKnown RBP12.72□□□□□ -0.37
GGA3-209ENST00000580646 COL13A1Q5TAT6 717 aaPredicted RBP12.72□□□□□ -0.37
GGA3-209ENST00000580646 STYK1Q6J9G0 422 aa12.72□□□□□ -0.37
GGA3-209ENST00000580646 LRP10Q7Z4F1 713 aa12.72□□□□□ -0.37
GGA3-209ENST00000580646 TSPYL6Q8N831 410 aa12.72□□□□□ -0.37
GGA3-209ENST00000580646 CNKSR1Q969H4 720 aa12.72□□□□□ -0.37
GGA3-209ENST00000580646 ZNF428Q96B54 188 aa12.72□□□□□ -0.37
GGA3-209ENST00000580646 MASTLQ96GX5 879 aa12.72□□□□□ -0.37
GGA3-209ENST00000580646 ZBTB3Q9H5J0 574 aa12.72□□□□□ -0.37
GGA3-209ENST00000580646 RNF181Q9P0P0 153 aa12.72□□□□□ -0.37
GGA3-209ENST00000580646 ARFGEF2Q9Y6D5 1785 aa12.71□□□□□ -0.37
GGA3-209ENST00000580646 KLRG2A4D1S0 409 aaPredicted RBP12.71□□□□□ -0.37
GGA3-209ENST00000580646 VAMP4O75379 141 aa12.71□□□□□ -0.37
GGA3-209ENST00000580646 ANXA1P04083 346 aa12.71□□□□□ -0.37
GGA3-209ENST00000580646 GTF2E1P29083 439 aaPredicted RBP12.71□□□□□ -0.37
GGA3-209ENST00000580646 RASSF7Q02833 373 aa12.71□□□□□ -0.37
GGA3-209ENST00000580646 PROSER3Q2NL68 480 aa12.71□□□□□ -0.37
GGA3-209ENST00000580646 CCDC30Q5VVM6 783 aa12.71□□□□□ -0.37
GGA3-209ENST00000580646 NECTIN2Q92692 538 aa12.71□□□□□ -0.37
GGA3-209ENST00000580646 CDCA7LQ96GN5 454 aa12.71□□□□□ -0.37
GGA3-209ENST00000580646 ZNF219Q9P2Y4 722 aaPredicted RBP12.71□□□□□ -0.37
GGA3-209ENST00000580646 ARFGEF1Q9Y6D6 1849 aa12.71□□□□□ -0.38
GGA3-209ENST00000580646 C21orf2O43822 256 aa12.7□□□□□ -0.38
GGA3-209ENST00000580646 LMNB1P20700 586 aa12.7□□□□□ -0.38
GGA3-209ENST00000580646 GPTP24298 496 aa12.7□□□□□ -0.38
GGA3-209ENST00000580646 GIGYF2Q6Y7W6 1299 aaKnown RBP12.7□□□□□ -0.38
GGA3-209ENST00000580646 ZNF34Q8IZ26 560 aa12.7□□□□□ -0.38
GGA3-209ENST00000580646 DNAJC5GQ8N7S2 189 aa12.7□□□□□ -0.38
GGA3-209ENST00000580646 NYXQ9GZU5 481 aa12.7□□□□□ -0.38
GGA3-209ENST00000580646 HYPKQ9NX55 129 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms