RNA–Protein interactions for RNA: ENST00000579880.5

NDEL1-206, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-206ENST00000579880 KIF3CO14782 793 aa22.71■■□□□ 1.23
NDEL1-206ENST00000579880 NBPF5PQ86XG9 351 aaPredicted RBP22.71■■□□□ 1.23
NDEL1-206ENST00000579880 PRKRIP1Q9H875 184 aaPredicted RBP22.71■■□□□ 1.23
NDEL1-206ENST00000579880 RASSF7Q02833 373 aa22.7■■□□□ 1.22
NDEL1-206ENST00000579880 NGEFQ8N5V2 710 aa22.7■■□□□ 1.22
NDEL1-206ENST00000579880 NIP7Q9Y221 180 aaKnown RBP eCLIP22.7■■□□□ 1.22
NDEL1-206ENST00000579880 RRP7AQ9Y3A4 280 aaKnown RBP22.7■■□□□ 1.22
NDEL1-206ENST00000579880 RUNDC1Q96C34 613 aa22.69■■□□□ 1.22
NDEL1-206ENST00000579880 BABAM1Q9NWV8 329 aa22.69■■□□□ 1.22
NDEL1-206ENST00000579880 COL11A2P13942 1736 aaPredicted RBP22.68■■□□□ 1.22
NDEL1-206ENST00000579880 NEUROD2Q15784 382 aa22.68■■□□□ 1.22
NDEL1-206ENST00000579880 HLFQ16534 295 aa22.68■■□□□ 1.22
NDEL1-206ENST00000579880 MYL6BP14649 208 aa22.67■■□□□ 1.22
NDEL1-206ENST00000579880 TPTE2Q6XPS3 522 aa22.67■■□□□ 1.22
NDEL1-206ENST00000579880 ERBB4Q15303 1308 aa22.66■■□□□ 1.22
NDEL1-206ENST00000579880 MAP3K15Q6ZN16 1313 aa22.66■■□□□ 1.22
NDEL1-206ENST00000579880 ERVV-1B6SEH8 477 aa22.66■■□□□ 1.22
NDEL1-206ENST00000579880 SRGNP10124 158 aa22.66■■□□□ 1.22
NDEL1-206ENST00000579880 STYK1Q6J9G0 422 aa22.66■■□□□ 1.22
NDEL1-206ENST00000579880 KIF6Q6ZMV9 814 aa22.66■■□□□ 1.22
NDEL1-206ENST00000579880 CNKSR1Q969H4 720 aa22.66■■□□□ 1.22
NDEL1-206ENST00000579880 NMRK2Q9NPI5 230 aa22.66■■□□□ 1.22
NDEL1-206ENST00000579880 ADAMTS8Q9UP79 889 aa22.66■■□□□ 1.22
NDEL1-206ENST00000579880 FAM177BA6PVY3 158 aa22.65■■□□□ 1.22
NDEL1-206ENST00000579880 LMNB1P20700 586 aa22.65■■□□□ 1.22
NDEL1-206ENST00000579880 TTLL7Q6ZT98 887 aa22.65■■□□□ 1.22
NDEL1-206ENST00000579880 MASTLQ96GX5 879 aa22.65■■□□□ 1.22
NDEL1-206ENST00000579880 ZNF219Q9P2Y4 722 aaPredicted RBP22.65■■□□□ 1.22
NDEL1-206ENST00000579880 KDM2BQ8NHM5 1336 aa22.64■■□□□ 1.22
NDEL1-206ENST00000579880 NFKBIEO00221 500 aa22.64■■□□□ 1.21
NDEL1-206ENST00000579880 C21orf2O43822 256 aa22.64■■□□□ 1.21
NDEL1-206ENST00000579880 ZC3H4Q9UPT8 1303 aaKnown RBP22.63■■□□□ 1.21
NDEL1-206ENST00000579880 SBF1O95248 1867 aa22.63■■□□□ 1.21
NDEL1-206ENST00000579880 ZEB1P37275 1124 aaPredicted RBP22.63■■□□□ 1.21
NDEL1-206ENST00000579880 EIF2S2P20042 333 aaKnown RBP22.62■■□□□ 1.21
NDEL1-206ENST00000579880 GTF2E1P29083 439 aaPredicted RBP22.62■■□□□ 1.21
NDEL1-206ENST00000579880 PRELPP51888 382 aa22.62■■□□□ 1.21
NDEL1-206ENST00000579880 PRPF40BQ6NWY9 871 aaKnown RBP22.62■■□□□ 1.21
NDEL1-206ENST00000579880 ZBTB3Q9H5J0 574 aa22.62■■□□□ 1.21
NDEL1-206ENST00000579880 TRIM35Q9UPQ4 493 aa22.62■■□□□ 1.21
NDEL1-206ENST00000579880 TOMM70O94826 608 aa22.61■■□□□ 1.21
NDEL1-206ENST00000579880 NPR1P16066 1061 aa22.6■■□□□ 1.21
NDEL1-206ENST00000579880 HSPA6P17066 643 aa22.6■■□□□ 1.21
NDEL1-206ENST00000579880 NYXQ9GZU5 481 aa22.6■■□□□ 1.21
NDEL1-206ENST00000579880 LAS1LQ9Y4W2 734 aaKnown RBP22.6■■□□□ 1.21
NDEL1-206ENST00000579880 KLRG2A4D1S0 409 aaPredicted RBP22.59■■□□□ 1.21
NDEL1-206ENST00000579880 CHL1O00533 1208 aa22.59■■□□□ 1.21
NDEL1-206ENST00000579880 PDIA6Q15084 440 aa22.59■■□□□ 1.21
NDEL1-206ENST00000579880 SOGA3Q5TF21 947 aa22.59■■□□□ 1.21
NDEL1-206ENST00000579880 GPTP24298 496 aa22.58■■□□□ 1.21
NDEL1-206ENST00000579880 LRP10Q7Z4F1 713 aa22.58■■□□□ 1.21
NDEL1-206ENST00000579880 SLX4Q8IY92 1834 aa22.57■■□□□ 1.2
NDEL1-206ENST00000579880 GIGYF2Q6Y7W6 1299 aaKnown RBP22.57■■□□□ 1.2
NDEL1-206ENST00000579880 C16orf71Q8IYS4 520 aaPredicted RBP22.57■■□□□ 1.2
NDEL1-206ENST00000579880 TAOK3Q9H2K8 898 aa22.57■■□□□ 1.2
NDEL1-206ENST00000579880 ARFGEF2Q9Y6D5 1785 aa22.57■■□□□ 1.2
NDEL1-206ENST00000579880 UBN2Q6ZU65 1347 aa22.57■■□□□ 1.2
NDEL1-206ENST00000579880 LTBP3Q9NS15 1303 aa22.57■■□□□ 1.2
NDEL1-206ENST00000579880 ABCC12Q96J65 1359 aa22.56■■□□□ 1.2
NDEL1-206ENST00000579880 IBTKQ9P2D0 1353 aaPredicted RBP22.56■■□□□ 1.2
NDEL1-206ENST00000579880 ANXA1P04083 346 aa22.56■■□□□ 1.2
NDEL1-206ENST00000579880 PROSER3Q2NL68 480 aa22.56■■□□□ 1.2
NDEL1-206ENST00000579880 NUTM1Q86Y26 1132 aa22.56■■□□□ 1.2
NDEL1-206ENST00000579880 NECTIN2Q92692 538 aa22.56■■□□□ 1.2
NDEL1-206ENST00000579880 RRAGCQ9HB90 399 aa22.56■■□□□ 1.2
NDEL1-206ENST00000579880 NUP98P52948 1817 aa22.56■■□□□ 1.2
NDEL1-206ENST00000579880 TIAM2Q8IVF5 1701 aa22.55■■□□□ 1.2
NDEL1-206ENST00000579880 KRT24Q2M2I5 525 aa22.55■■□□□ 1.2
NDEL1-206ENST00000579880 ERFEQ4G0M1 354 aa22.55■■□□□ 1.2
NDEL1-206ENST00000579880 ZNF34Q8IZ26 560 aa22.55■■□□□ 1.2
NDEL1-206ENST00000579880 CACNA1SQ13698 1873 aa22.55■■□□□ 1.2
NDEL1-206ENST00000579880 FER1L6Q2WGJ9 1857 aa22.54■■□□□ 1.2
NDEL1-206ENST00000579880 GLTPD2A6NH11 291 aa22.54■■□□□ 1.2
NDEL1-206ENST00000579880 CCDC93Q567U6 631 aa22.54■■□□□ 1.2
NDEL1-206ENST00000579880 SUSD4Q5VX71 490 aa22.54■■□□□ 1.2
NDEL1-206ENST00000579880 C7orf43Q8WVR3 580 aa22.54■■□□□ 1.2
NDEL1-206ENST00000579880 TNRC6CQ9HCJ0 1690 aaKnown RBP22.54■■□□□ 1.2
NDEL1-206ENST00000579880 APAF1O14727 1248 aa22.53■■□□□ 1.2
NDEL1-206ENST00000579880 RBM46Q8TBY0 533 aaKnown RBP22.53■■□□□ 1.2
NDEL1-206ENST00000579880 RIC1Q4ADV7 1423 aa22.52■■□□□ 1.2
NDEL1-206ENST00000579880 ALDH1B1P30837 517 aa22.52■■□□□ 1.2
NDEL1-206ENST00000579880 CRY2Q49AN0 593 aa22.52■■□□□ 1.2
NDEL1-206ENST00000579880 PARP10Q53GL7 1025 aa22.52■■□□□ 1.2
NDEL1-206ENST00000579880 CFAP44Q96MT7 982 aa22.52■■□□□ 1.2
NDEL1-206ENST00000579880 DDX21Q9NR30 783 aaKnown RBP eCLIP22.52■■□□□ 1.2
NDEL1-206ENST00000579880 NTSR2O95665 410 aa22.51■■□□□ 1.19
NDEL1-206ENST00000579880 COPS6Q7L5N1 327 aa22.51■■□□□ 1.19
NDEL1-206ENST00000579880 PPP1R42Q7Z4L9 355 aa22.51■■□□□ 1.19
NDEL1-206ENST00000579880 XAGE3Q8WTP9 111 aa22.51■■□□□ 1.19
NDEL1-206ENST00000579880 CCDC88AQ3V6T2 1871 aa22.51■■□□□ 1.19
NDEL1-206ENST00000579880 HOXB7P09629 217 aa22.5■■□□□ 1.19
NDEL1-206ENST00000579880 AIMP1Q12904 312 aaKnown RBP22.5■■□□□ 1.19
NDEL1-206ENST00000579880 HDGFL1Q5TGJ6 251 aa22.5■■□□□ 1.19
NDEL1-206ENST00000579880 DPY19L2Q6NUT2 758 aa22.5■■□□□ 1.19
NDEL1-206ENST00000579880 HSP90AB3PQ58FF7 597 aa22.49■■□□□ 1.19
NDEL1-206ENST00000579880 RPGRQ92834 1020 aaKnown RBP22.49■■□□□ 1.19
NDEL1-206ENST00000579880 CHPF2Q9P2E5 772 aa22.49■■□□□ 1.19
NDEL1-206ENST00000579880 VEGFAP15692 232 aaPredicted RBP22.48■■□□□ 1.19
NDEL1-206ENST00000579880 FKBP4Q02790 459 aaKnown RBP eCLIP22.48■■□□□ 1.19
NDEL1-206ENST00000579880 CALD1Q05682 793 aaKnown RBP22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms