RNA–Protein interactions for RNA: ENST00000578441.5

CTC1-204, Transcript of CST telomere replication complex component 1, humanhuman

TSL 5

Gene CTC1, Length 781 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-204ENST00000578441 CNKSR1Q969H4 720 aa13.49□□□□□ -0.25
CTC1-204ENST00000578441 TBC1D2BQ9UPU7 963 aa13.49□□□□□ -0.25
CTC1-204ENST00000578441 ZNF652Q9Y2D9 606 aa13.49□□□□□ -0.25
CTC1-204ENST00000578441 SNRPA1P09661 255 aaKnown RBP13.48□□□□□ -0.25
CTC1-204ENST00000578441 DZIP3Q86Y13 1208 aaKnown RBP13.48□□□□□ -0.25
CTC1-204ENST00000578441 PRDM10Q9NQV6 1147 aa13.48□□□□□ -0.25
CTC1-204ENST00000578441 CREBZFQ9NS37 354 aa13.48□□□□□ -0.25
CTC1-204ENST00000578441 ZNF330Q9Y3S2 320 aaPredicted RBP13.48□□□□□ -0.25
CTC1-204ENST00000578441 NPHP1O15259 732 aa13.47□□□□□ -0.25
CTC1-204ENST00000578441 A1BGP04217 495 aa13.47□□□□□ -0.25
CTC1-204ENST00000578441 SRGNP10124 158 aa13.47□□□□□ -0.25
CTC1-204ENST00000578441 ZNF622Q969S3 477 aaKnown RBP eCLIP13.47□□□□□ -0.25
CTC1-204ENST00000578441 LAMB4A4D0S4 1761 aa13.47□□□□□ -0.25
CTC1-204ENST00000578441 U2AF1L5P0DN76 240 aaPredicted RBP13.46□□□□□ -0.25
CTC1-204ENST00000578441 PPP2R1AP30153 589 aa13.46□□□□□ -0.25
CTC1-204ENST00000578441 U2AF1Q01081 240 aaKnown RBP eCLIP13.46□□□□□ -0.25
CTC1-204ENST00000578441 MASTLQ96GX5 879 aa13.46□□□□□ -0.25
CTC1-204ENST00000578441 TAOK3Q9H2K8 898 aa13.46□□□□□ -0.25
CTC1-204ENST00000578441 USP16Q9Y5T5 823 aa13.46□□□□□ -0.25
CTC1-204ENST00000578441 CACNA1SQ13698 1873 aa13.45□□□□□ -0.26
CTC1-204ENST00000578441 POTECB2RU33 542 aa13.45□□□□□ -0.26
CTC1-204ENST00000578441 C21orf2O43822 256 aa13.45□□□□□ -0.26
CTC1-204ENST00000578441 ERFEQ4G0M1 354 aa13.45□□□□□ -0.26
CTC1-204ENST00000578441 SLX4Q8IY92 1834 aa13.45□□□□□ -0.26
CTC1-204ENST00000578441 KLRG2A4D1S0 409 aaPredicted RBP13.44□□□□□ -0.26
CTC1-204ENST00000578441 KCNQ3O43525 872 aa13.44□□□□□ -0.26
CTC1-204ENST00000578441 NEFMP07197 916 aa13.44□□□□□ -0.26
CTC1-204ENST00000578441 CNGB1Q14028 1251 aaPredicted RBP13.44□□□□□ -0.26
CTC1-204ENST00000578441 PRPF40BQ6NWY9 871 aaKnown RBP13.44□□□□□ -0.26
CTC1-204ENST00000578441 NBPF5PQ86XG9 351 aaPredicted RBP13.44□□□□□ -0.26
CTC1-204ENST00000578441 NPR1P16066 1061 aa13.43□□□□□ -0.26
CTC1-204ENST00000578441 TAF7Q15545 349 aaPredicted RBP13.43□□□□□ -0.26
CTC1-204ENST00000578441 TPTE2Q6XPS3 522 aa13.43□□□□□ -0.26
CTC1-204ENST00000578441 MCM10Q7L590 875 aa13.43□□□□□ -0.26
CTC1-204ENST00000578441 PNISRQ8TF01 805 aaKnown RBP13.43□□□□□ -0.26
CTC1-204ENST00000578441 SCN4AP35499 1836 aa13.43□□□□□ -0.26
CTC1-204ENST00000578441 PCDH10Q9P2E7 1040 aa13.42□□□□□ -0.26
CTC1-204ENST00000578441 KDM3BQ7LBC6 1761 aa13.42□□□□□ -0.26
CTC1-204ENST00000578441 DLG5Q8TDM6 1919 aa13.41□□□□□ -0.26
CTC1-204ENST00000578441 IQCA1LA6NCM1 817 aa13.41□□□□□ -0.26
CTC1-204ENST00000578441 CCDC93Q567U6 631 aa13.41□□□□□ -0.26
CTC1-204ENST00000578441 CHADLQ6NUI6 762 aa13.41□□□□□ -0.26
CTC1-204ENST00000578441 C7orf43Q8WVR3 580 aa13.41□□□□□ -0.26
CTC1-204ENST00000578441 CNTNAP1P78357 1384 aa13.41□□□□□ -0.26
CTC1-204ENST00000578441 NBPF26B4DH59 902 aa13.4□□□□□ -0.26
CTC1-204ENST00000578441 ALDH1B1P30837 517 aa13.4□□□□□ -0.26
CTC1-204ENST00000578441 CTCFP49711 727 aaPredicted RBP13.4□□□□□ -0.26
CTC1-204ENST00000578441 NBPF10Q6P3W6 841 aaKnown RBP13.4□□□□□ -0.26
CTC1-204ENST00000578441 CCDC24Q8N4L8 307 aa13.4□□□□□ -0.26
CTC1-204ENST00000578441 NBPF15Q8N660 670 aa13.4□□□□□ -0.26
CTC1-204ENST00000578441 L3MBTL3Q96JM7 780 aaPredicted RBP13.4□□□□□ -0.26
CTC1-204ENST00000578441 PNNQ9H307 717 aaKnown RBP13.4□□□□□ -0.26
CTC1-204ENST00000578441 NIP7Q9Y221 180 aaKnown RBP eCLIP13.4□□□□□ -0.26
CTC1-204ENST00000578441 RIC1Q4ADV7 1423 aa13.39□□□□□ -0.27
CTC1-204ENST00000578441 PRAMEF22A3QJZ6 481 aa13.39□□□□□ -0.27
CTC1-204ENST00000578441 ERVV-1B6SEH8 477 aa13.39□□□□□ -0.27
CTC1-204ENST00000578441 FOXN1O15353 648 aa13.39□□□□□ -0.27
CTC1-204ENST00000578441 RTKN2Q8IZC4 609 aa13.39□□□□□ -0.27
CTC1-204ENST00000578441 NYXQ9GZU5 481 aa13.39□□□□□ -0.27
CTC1-204ENST00000578441 ZNF219Q9P2Y4 722 aaPredicted RBP13.39□□□□□ -0.27
CTC1-204ENST00000578441 IBTKQ9P2D0 1353 aaPredicted RBP13.39□□□□□ -0.27
CTC1-204ENST00000578441 PASKQ96RG2 1323 aa13.39□□□□□ -0.27
CTC1-204ENST00000578441 PIP4K2AP48426 406 aaPredicted RBP13.38□□□□□ -0.27
CTC1-204ENST00000578441 FKBP4Q02790 459 aaKnown RBP eCLIP13.38□□□□□ -0.27
CTC1-204ENST00000578441 DCTN1Q14203 1278 aa13.38□□□□□ -0.27
CTC1-204ENST00000578441 NUP98P52948 1817 aa13.38□□□□□ -0.27
CTC1-204ENST00000578441 CRY2Q49AN0 593 aa13.37□□□□□ -0.27
CTC1-204ENST00000578441 GRIPAP1Q4V328 841 aa13.37□□□□□ -0.27
CTC1-204ENST00000578441 MKRN1Q9UHC7 482 aaKnown RBP13.37□□□□□ -0.27
CTC1-204ENST00000578441 ERBB4Q15303 1308 aa13.37□□□□□ -0.27
CTC1-204ENST00000578441 DDNO94850 711 aaPredicted RBP13.36□□□□□ -0.27
CTC1-204ENST00000578441 GTF2E1P29083 439 aaPredicted RBP13.36□□□□□ -0.27
CTC1-204ENST00000578441 CC2D2BQ6DHV5 1058 aa13.36□□□□□ -0.27
CTC1-204ENST00000578441 AIDAQ96BJ3 306 aa13.36□□□□□ -0.27
CTC1-204ENST00000578441 WBP1LQ9NX94 342 aa13.36□□□□□ -0.27
CTC1-204ENST00000578441 EIF4A1P60842 406 aaKnown RBP13.35□□□□□ -0.27
CTC1-204ENST00000578441 NFE2L2Q16236 605 aa13.35□□□□□ -0.27
CTC1-204ENST00000578441 HLFQ16534 295 aa13.35□□□□□ -0.27
CTC1-204ENST00000578441 KIF6Q6ZMV9 814 aa13.35□□□□□ -0.27
CTC1-204ENST00000578441 LDHDQ86WU2 507 aa13.35□□□□□ -0.27
CTC1-204ENST00000578441 PLEKHF1Q96S99 279 aa13.35□□□□□ -0.27
CTC1-204ENST00000578441 PSMD1Q99460 953 aa13.35□□□□□ -0.27
CTC1-204ENST00000578441 MAP3K15Q6ZN16 1313 aa13.35□□□□□ -0.27
CTC1-204ENST00000578441 PNMA8AQ86V59 439 aaPredicted RBP13.34□□□□□ -0.27
CTC1-204ENST00000578441 TAF1DQ9H5J8 278 aaPredicted RBP13.34□□□□□ -0.27
CTC1-204ENST00000578441 ADAMTSL1Q8N6G6 1762 aa13.34□□□□□ -0.27
CTC1-204ENST00000578441 MAPK8IP3Q9UPT6 1336 aa13.34□□□□□ -0.27
CTC1-204ENST00000578441 SNED1Q8TER0 1413 aa13.33□□□□□ -0.28
CTC1-204ENST00000578441 TMEM88BA6NKF7 163 aa13.33□□□□□ -0.28
CTC1-204ENST00000578441 FZD9O00144 591 aa13.33□□□□□ -0.28
CTC1-204ENST00000578441 HOXA10P31260 410 aaPredicted RBP13.33□□□□□ -0.28
CTC1-204ENST00000578441 GPC2Q8N158 579 aa13.33□□□□□ -0.28
CTC1-204ENST00000578441 BABAM1Q9NWV8 329 aa13.33□□□□□ -0.28
CTC1-204ENST00000578441 HACL1Q9UJ83 578 aa13.33□□□□□ -0.28
CTC1-204ENST00000578441 ITGBL1O95965 494 aaPredicted RBP13.32□□□□□ -0.28
CTC1-204ENST00000578441 IARSP41252 1262 aaKnown RBP13.32□□□□□ -0.28
CTC1-204ENST00000578441 VEGFBP49765 207 aa13.32□□□□□ -0.28
CTC1-204ENST00000578441 RGS19P49795 217 aa13.32□□□□□ -0.28
CTC1-204ENST00000578441 ZNF277Q9NRM2 450 aaPredicted RBP13.32□□□□□ -0.28
CTC1-204ENST00000578441 MIS18AQ9NYP9 233 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms