RNA–Protein interactions for RNA: ENST00000578018.5

CDK5RAP3-206, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 567 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-206ENST00000578018 ZNF622Q969S3 477 aaKnown RBP eCLIP22.04■■□□□ 1.129e-13■■□□□ 12.1
CDK5RAP3-206ENST00000578018 ZNF652Q9Y2D9 606 aa22.04■■□□□ 1.12
CDK5RAP3-206ENST00000578018 SLX4Q8IY92 1834 aa22.03■■□□□ 1.12
CDK5RAP3-206ENST00000578018 RGL2O15211 777 aa22.03■■□□□ 1.12
CDK5RAP3-206ENST00000578018 ST5P78524 1137 aa22.03■■□□□ 1.12
CDK5RAP3-206ENST00000578018 PNISRQ8TF01 805 aaKnown RBP22.03■■□□□ 1.12
CDK5RAP3-206ENST00000578018 MAPK8IP3Q9UPT6 1336 aa22.03■■□□□ 1.12
CDK5RAP3-206ENST00000578018 DICER1Q9UPY3 1922 aaKnown RBP22.02■■□□□ 1.12
CDK5RAP3-206ENST00000578018 NPHP1O15259 732 aa22.02■■□□□ 1.12
CDK5RAP3-206ENST00000578018 THUMPD2Q9BTF0 503 aaKnown RBP22.02■■□□□ 1.12
CDK5RAP3-206ENST00000578018 RALBP1Q15311 655 aa22.01■■□□□ 1.11
CDK5RAP3-206ENST00000578018 NBPF5PQ86XG9 351 aaPredicted RBP22.01■■□□□ 1.11
CDK5RAP3-206ENST00000578018 RBM46Q8TBY0 533 aaKnown RBP22.01■■□□□ 1.11
CDK5RAP3-206ENST00000578018 PNNQ9H307 717 aaKnown RBP22.01■■□□□ 1.11
CDK5RAP3-206ENST00000578018 SRGNP10124 158 aa22■■□□□ 1.11
CDK5RAP3-206ENST00000578018 STYK1Q6J9G0 422 aa22■■□□□ 1.11
CDK5RAP3-206ENST00000578018 NUP98P52948 1817 aa21.99■■□□□ 1.11
CDK5RAP3-206ENST00000578018 C21orf2O43822 256 aa21.99■■□□□ 1.11
CDK5RAP3-206ENST00000578018 EIF4A1P60842 406 aaKnown RBP21.99■■□□□ 1.11
CDK5RAP3-206ENST00000578018 WDR90Q96KV7 1748 aa21.98■■□□□ 1.11
CDK5RAP3-206ENST00000578018 C16orf71Q8IYS4 520 aaPredicted RBP21.98■■□□□ 1.11
CDK5RAP3-206ENST00000578018 CNKSR1Q969H4 720 aa21.98■■□□□ 1.11
CDK5RAP3-206ENST00000578018 RRAGCQ9HB90 399 aa21.98■■□□□ 1.11
CDK5RAP3-206ENST00000578018 ZNF219Q9P2Y4 722 aaPredicted RBP21.98■■□□□ 1.11
CDK5RAP3-206ENST00000578018 NIP7Q9Y221 180 aaKnown RBP eCLIP21.98■■□□□ 1.11
CDK5RAP3-206ENST00000578018 APLP1P51693 650 aa21.97■■□□□ 1.11
CDK5RAP3-206ENST00000578018 HLFQ16534 295 aa21.97■■□□□ 1.11
CDK5RAP3-206ENST00000578018 PRPF40BQ6NWY9 871 aaKnown RBP21.97■■□□□ 1.11
CDK5RAP3-206ENST00000578018 MASTLQ96GX5 879 aa21.97■■□□□ 1.11
CDK5RAP3-206ENST00000578018 LTBP3Q9NS15 1303 aa21.96■■□□□ 1.11
CDK5RAP3-206ENST00000578018 GLTPD2A6NH11 291 aa21.95■■□□□ 1.1
CDK5RAP3-206ENST00000578018 KLRG2A4D1S0 409 aaPredicted RBP21.94■■□□□ 1.1
CDK5RAP3-206ENST00000578018 FSTL1Q12841 308 aa21.94■■□□□ 1.1
CDK5RAP3-206ENST00000578018 DDX10Q13206 875 aaKnown RBP21.94■■□□□ 1.1
CDK5RAP3-206ENST00000578018 TPTE2Q6XPS3 522 aa21.94■■□□□ 1.1
CDK5RAP3-206ENST00000578018 TAOK3Q9H2K8 898 aa21.94■■□□□ 1.1
CDK5RAP3-206ENST00000578018 MYBBP1AQ9BQG0 1328 aaKnown RBP21.94■■□□□ 1.1
CDK5RAP3-206ENST00000578018 MAP3K15Q6ZN16 1313 aa21.93■■□□□ 1.1
CDK5RAP3-206ENST00000578018 NGEFQ8N5V2 710 aa21.93■■□□□ 1.1
CDK5RAP3-206ENST00000578018 ERVV-1B6SEH8 477 aa21.92■■□□□ 1.1
CDK5RAP3-206ENST00000578018 NPR1P16066 1061 aa21.92■■□□□ 1.1
CDK5RAP3-206ENST00000578018 RIPK4P57078 832 aa21.92■■□□□ 1.1
CDK5RAP3-206ENST00000578018 SOGA3Q5TF21 947 aa21.92■■□□□ 1.1
CDK5RAP3-206ENST00000578018 RRP7AQ9Y3A4 280 aaKnown RBP21.92■■□□□ 1.1
CDK5RAP3-206ENST00000578018 ABCC12Q96J65 1359 aa21.91■■□□□ 1.1
CDK5RAP3-206ENST00000578018 ERBB4Q15303 1308 aa21.91■■□□□ 1.1
CDK5RAP3-206ENST00000578018 FAM177BA6PVY3 158 aa21.91■■□□□ 1.1
CDK5RAP3-206ENST00000578018 TTLL7Q6ZT98 887 aa21.91■■□□□ 1.1
CDK5RAP3-206ENST00000578018 C7orf43Q8WVR3 580 aa21.91■■□□□ 1.1
CDK5RAP3-206ENST00000578018 TSPYL4Q9UJ04 414 aa21.91■■□□□ 1.1
CDK5RAP3-206ENST00000578018 MYL6BP14649 208 aa21.9■■□□□ 1.1
CDK5RAP3-206ENST00000578018 TMPOP42166 694 aaKnown RBP21.9■■□□□ 1.1
CDK5RAP3-206ENST00000578018 ERFEQ4G0M1 354 aa21.9■■□□□ 1.1
CDK5RAP3-206ENST00000578018 KIF6Q6ZMV9 814 aa21.9■■□□□ 1.1
CDK5RAP3-206ENST00000578018 IBTKQ9P2D0 1353 aaPredicted RBP21.89■■□□□ 1.1
CDK5RAP3-206ENST00000578018 VEGFAP15692 232 aaPredicted RBP21.89■■□□□ 1.09
CDK5RAP3-206ENST00000578018 LMOD3Q0VAK6 560 aa21.88■■□□□ 1.09
CDK5RAP3-206ENST00000578018 DNAJC5GQ8N7S2 189 aa21.88■■□□□ 1.09
CDK5RAP3-206ENST00000578018 SMC1BQ8NDV3 1235 aa21.88■■□□□ 1.09
CDK5RAP3-206ENST00000578018 ZBTB3Q9H5J0 574 aa21.88■■□□□ 1.09
CDK5RAP3-206ENST00000578018 BABAM1Q9NWV8 329 aa21.88■■□□□ 1.09
CDK5RAP3-206ENST00000578018 RIC1Q4ADV7 1423 aa21.88■■□□□ 1.09
CDK5RAP3-206ENST00000578018 UBN2Q6ZU65 1347 aa21.87■■□□□ 1.09
CDK5RAP3-206ENST00000578018 CCDC93Q567U6 631 aa21.87■■□□□ 1.09
CDK5RAP3-206ENST00000578018 NYXQ9GZU5 481 aa21.87■■□□□ 1.09
CDK5RAP3-206ENST00000578018 POTECB2RU33 542 aa21.86■■□□□ 1.09
CDK5RAP3-206ENST00000578018 GTF2E1P29083 439 aaPredicted RBP21.86■■□□□ 1.09
CDK5RAP3-206ENST00000578018 CRY2Q49AN0 593 aa21.86■■□□□ 1.09
CDK5RAP3-206ENST00000578018 DPY19L2Q6NUT2 758 aa21.86■■□□□ 1.09
CDK5RAP3-206ENST00000578018 LRP10Q7Z4F1 713 aa21.86■■□□□ 1.09
CDK5RAP3-206ENST00000578018 NUTM1Q86Y26 1132 aa21.86■■□□□ 1.09
CDK5RAP3-206ENST00000578018 CCDC146Q8IYE0 955 aa21.86■■□□□ 1.09
CDK5RAP3-206ENST00000578018 GPTP24298 496 aa21.85■■□□□ 1.09
CDK5RAP3-206ENST00000578018 PDIA6Q15084 440 aa21.85■■□□□ 1.09
CDK5RAP3-206ENST00000578018 ANKRD36CQ5JPF3 1778 aa21.84■■□□□ 1.09
CDK5RAP3-206ENST00000578018 SNED1Q8TER0 1413 aa21.84■■□□□ 1.09
CDK5RAP3-206ENST00000578018 HTRA3P83110 453 aa21.84■■□□□ 1.09
CDK5RAP3-206ENST00000578018 OLFM4Q6UX06 510 aa21.84■■□□□ 1.09
CDK5RAP3-206ENST00000578018 GIGYF2Q6Y7W6 1299 aaKnown RBP21.84■■□□□ 1.09
CDK5RAP3-206ENST00000578018 ZEB1P37275 1124 aaPredicted RBP21.83■■□□□ 1.09
CDK5RAP3-206ENST00000578018 FKBP4Q02790 459 aaKnown RBP eCLIP21.83■■□□□ 1.09
CDK5RAP3-206ENST00000578018 ZNF34Q8IZ26 560 aa21.83■■□□□ 1.09
CDK5RAP3-206ENST00000578018 EIF2S2P20042 333 aaKnown RBP21.82■■□□□ 1.08
CDK5RAP3-206ENST00000578018 ALDH1B1P30837 517 aa21.82■■□□□ 1.08
CDK5RAP3-206ENST00000578018 WDR43Q15061 677 aaKnown RBP eCLIP21.82■■□□□ 1.08
CDK5RAP3-206ENST00000578018 PROSER3Q2NL68 480 aa21.82■■□□□ 1.08
CDK5RAP3-206ENST00000578018 SUSD4Q5VX71 490 aa21.82■■□□□ 1.08
CDK5RAP3-206ENST00000578018 NTSR2O95665 410 aa21.81■■□□□ 1.08
CDK5RAP3-206ENST00000578018 NEUROD2Q15784 382 aa21.81■■□□□ 1.08
CDK5RAP3-206ENST00000578018 RUNDC1Q96C34 613 aa21.81■■□□□ 1.08
CDK5RAP3-206ENST00000578018 DDNO94850 711 aaPredicted RBP21.8■■□□□ 1.08
CDK5RAP3-206ENST00000578018 ANXA1P04083 346 aa21.8■■□□□ 1.08
CDK5RAP3-206ENST00000578018 RTKN2Q8IZC4 609 aa21.8■■□□□ 1.08
CDK5RAP3-206ENST00000578018 ZNF277Q9NRM2 450 aaPredicted RBP21.8■■□□□ 1.08
CDK5RAP3-206ENST00000578018 TRIM35Q9UPQ4 493 aa21.8■■□□□ 1.08
CDK5RAP3-206ENST00000578018 SCN4AP35499 1836 aa21.8■■□□□ 1.08
CDK5RAP3-206ENST00000578018 CHL1O00533 1208 aa21.79■■□□□ 1.08
CDK5RAP3-206ENST00000578018 HOXA10P31260 410 aaPredicted RBP21.79■■□□□ 1.08
CDK5RAP3-206ENST00000578018 KLRG1Q96E93 195 aa21.79■■□□□ 1.08
CDK5RAP3-206ENST00000578018 PARP10Q53GL7 1025 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 181.8 ms