RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 KCNQ3O43525 872 aa14.39□□□□□ -0.11
CDK5RAP3-204ENST00000577664 VAMP4O75379 141 aa14.39□□□□□ -0.11
CDK5RAP3-204ENST00000577664 CHMP4AQ9BY43 222 aa14.39□□□□□ -0.11
CDK5RAP3-204ENST00000577664 UBR2Q8IWV8 1755 aa14.39□□□□□ -0.11
CDK5RAP3-204ENST00000577664 POTECB2RU33 542 aa14.38□□□□□ -0.11
CDK5RAP3-204ENST00000577664 EXOSC9Q06265 439 aaKnown RBP14.38□□□□□ -0.11
CDK5RAP3-204ENST00000577664 SLC39A6Q13433 755 aa14.38□□□□□ -0.11
CDK5RAP3-204ENST00000577664 C8orf58Q8NAV2 365 aa14.38□□□□□ -0.11
CDK5RAP3-204ENST00000577664 ZNF496Q96IT1 587 aaPredicted RBP14.38□□□□□ -0.11
CDK5RAP3-204ENST00000577664 FMNL2Q96PY5 1086 aa14.38□□□□□ -0.11
CDK5RAP3-204ENST00000577664 PIM2Q9P1W9 311 aa14.38□□□□□ -0.11
CDK5RAP3-204ENST00000577664 ZNF831Q5JPB2 1677 aa14.38□□□□□ -0.11
CDK5RAP3-204ENST00000577664 TTC5Q8N0Z6 440 aa14.37□□□□□ -0.11
CDK5RAP3-204ENST00000577664 TEX13AQ9BXU3 409 aaPredicted RBP14.37□□□□□ -0.11
CDK5RAP3-204ENST00000577664 CCDC87Q9NVE4 849 aa14.37□□□□□ -0.11
CDK5RAP3-204ENST00000577664 C4AP0C0L4 1744 aa14.36□□□□□ -0.11
CDK5RAP3-204ENST00000577664 SNRPA1P09661 255 aaKnown RBP14.36□□□□□ -0.11
CDK5RAP3-204ENST00000577664 VEGFBP49765 207 aa14.36□□□□□ -0.11
CDK5RAP3-204ENST00000577664 BRPF1P55201 1214 aaPredicted RBP14.36□□□□□ -0.11
CDK5RAP3-204ENST00000577664 TSPYL6Q8N831 410 aa14.36□□□□□ -0.11
CDK5RAP3-204ENST00000577664 TWISTNBQ3B726 338 aaPredicted RBP14.35□□□□□ -0.11
CDK5RAP3-204ENST00000577664 DALRD3Q5D0E6 543 aaKnown RBP14.35□□□□□ -0.11
CDK5RAP3-204ENST00000577664 NLGN1Q8N2Q7 840 aa14.35□□□□□ -0.11
CDK5RAP3-204ENST00000577664 SLC4A9Q96Q91 983 aa14.35□□□□□ -0.11
CDK5RAP3-204ENST00000577664 LOC102724428A0A0B4J2F2 783 aa14.34□□□□□ -0.11
CDK5RAP3-204ENST00000577664 SIK1P57059 783 aa14.34□□□□□ -0.11
CDK5RAP3-204ENST00000577664 ALDH1L2Q3SY69 923 aa14.34□□□□□ -0.11
CDK5RAP3-204ENST00000577664 PASKQ96RG2 1323 aa14.34□□□□□ -0.11
CDK5RAP3-204ENST00000577664 KRT24Q2M2I5 525 aa14.33□□□□□ -0.12
CDK5RAP3-204ENST00000577664 CHADLQ6NUI6 762 aa14.33□□□□□ -0.12
CDK5RAP3-204ENST00000577664 LINC00116Q8NCU8 138 aa14.33□□□□□ -0.12
CDK5RAP3-204ENST00000577664 LMNB1P20700 586 aa14.32□□□□□ -0.12
CDK5RAP3-204ENST00000577664 RARSP54136 660 aaKnown RBP14.32□□□□□ -0.12
CDK5RAP3-204ENST00000577664 USP16Q9Y5T5 823 aa14.32□□□□□ -0.12
CDK5RAP3-204ENST00000577664 ERBB4Q15303 1308 aa14.32□□□□□ -0.12
CDK5RAP3-204ENST00000577664 PTCD1O75127 700 aaKnown RBP14.31□□□□□ -0.12
CDK5RAP3-204ENST00000577664 CCDC30Q5VVM6 783 aa14.31□□□□□ -0.12
CDK5RAP3-204ENST00000577664 TIAM2Q8IVF5 1701 aa14.3□□□□□ -0.12
CDK5RAP3-204ENST00000577664 GNPATO15228 680 aa14.3□□□□□ -0.12
CDK5RAP3-204ENST00000577664 CENPBP07199 599 aaPredicted RBP14.3□□□□□ -0.12
CDK5RAP3-204ENST00000577664 CYP19A1P11511 503 aaPredicted RBP14.3□□□□□ -0.12
CDK5RAP3-204ENST00000577664 MAP2K1Q02750 393 aaPredicted RBP14.3□□□□□ -0.12
CDK5RAP3-204ENST00000577664 RC3H1Q5TC82 1133 aaKnown RBP14.3□□□□□ -0.12
CDK5RAP3-204ENST00000577664 PRAMEF22A3QJZ6 481 aa14.29□□□□□ -0.12
CDK5RAP3-204ENST00000577664 ELL2O00472 640 aaPredicted RBP14.29□□□□□ -0.12
CDK5RAP3-204ENST00000577664 STARD3NLO95772 234 aa14.29□□□□□ -0.12
CDK5RAP3-204ENST00000577664 ATP6V1AP38606 617 aa14.29□□□□□ -0.12
CDK5RAP3-204ENST00000577664 PDIA6Q15084 440 aa14.29□□□□□ -0.12
CDK5RAP3-204ENST00000577664 RBM42Q9BTD8 480 aaKnown RBP14.29□□□□□ -0.12
CDK5RAP3-204ENST00000577664 RCAN3Q9UKA8 241 aa14.29□□□□□ -0.12
CDK5RAP3-204ENST00000577664 CACNA1FO60840 1977 aa14.29□□□□□ -0.12
CDK5RAP3-204ENST00000577664 RASSF10A6NK89 507 aa14.28□□□□□ -0.12
CDK5RAP3-204ENST00000577664 RASSF7Q02833 373 aa14.28□□□□□ -0.12
CDK5RAP3-204ENST00000577664 ITPK1Q13572 414 aa14.28□□□□□ -0.12
CDK5RAP3-204ENST00000577664 HDGFL1Q5TGJ6 251 aa14.28□□□□□ -0.12
CDK5RAP3-204ENST00000577664 PRPF38BQ5VTL8 546 aaKnown RBP14.28□□□□□ -0.12
CDK5RAP3-204ENST00000577664 RNF123Q5XPI4 1314 aa14.28□□□□□ -0.12
CDK5RAP3-204ENST00000577664 LRP10Q7Z4F1 713 aa14.28□□□□□ -0.12
CDK5RAP3-204ENST00000577664 SSH1Q8WYL5 1049 aa14.28□□□□□ -0.12
CDK5RAP3-204ENST00000577664 DDX21Q9NR30 783 aaKnown RBP eCLIP14.28□□□□□ -0.12
CDK5RAP3-204ENST00000577664 DBF4Q9UBU7 674 aaPredicted RBP14.28□□□□□ -0.12
CDK5RAP3-204ENST00000577664 GYS1P13807 737 aa14.27□□□□□ -0.13
CDK5RAP3-204ENST00000577664 DNAJC10Q8IXB1 793 aa14.27□□□□□ -0.13
CDK5RAP3-204ENST00000577664 MRPL50Q8N5N7 158 aaKnown RBP14.27□□□□□ -0.13
CDK5RAP3-204ENST00000577664 ARHGAP45Q92619 1136 aa14.27□□□□□ -0.13
CDK5RAP3-204ENST00000577664 PARP3Q9Y6F1 533 aa14.27□□□□□ -0.13
CDK5RAP3-204ENST00000577664 THSD7BQ9C0I4 1608 aa14.26□□□□□ -0.13
CDK5RAP3-204ENST00000577664 CNTNAP4Q9C0A0 1308 aa14.26□□□□□ -0.13
CDK5RAP3-204ENST00000577664 TMEM88BA6NKF7 163 aa14.26□□□□□ -0.13
CDK5RAP3-204ENST00000577664 DPY19L2Q6NUT2 758 aa14.26□□□□□ -0.13
CDK5RAP3-204ENST00000577664 INTS5Q6P9B9 1019 aaKnown RBP14.26□□□□□ -0.13
CDK5RAP3-204ENST00000577664 TJP1Q07157 1748 aa14.26□□□□□ -0.13
CDK5RAP3-204ENST00000577664 LAMB4A4D0S4 1761 aa14.25□□□□□ -0.13
CDK5RAP3-204ENST00000577664 SLC4A2P04920 1241 aa14.25□□□□□ -0.13
CDK5RAP3-204ENST00000577664 POTEIP0CG38 1075 aa14.25□□□□□ -0.13
CDK5RAP3-204ENST00000577664 POTEJP0CG39 1038 aa14.25□□□□□ -0.13
CDK5RAP3-204ENST00000577664 ADRA2BP18089 450 aa14.25□□□□□ -0.13
CDK5RAP3-204ENST00000577664 TRAPPC3LQ5T215 181 aa14.25□□□□□ -0.13
CDK5RAP3-204ENST00000577664 HYPKQ9NX55 129 aa14.25□□□□□ -0.13
CDK5RAP3-204ENST00000577664 COL5A3P25940 1745 aaPredicted RBP14.24□□□□□ -0.13
CDK5RAP3-204ENST00000577664 NBPF26B4DH59 902 aa14.24□□□□□ -0.13
CDK5RAP3-204ENST00000577664 EIF2S2P20042 333 aaKnown RBP14.24□□□□□ -0.13
CDK5RAP3-204ENST00000577664 IL6STP40189 918 aaPredicted RBP14.24□□□□□ -0.13
CDK5RAP3-204ENST00000577664 NBPF10Q6P3W6 841 aaKnown RBP14.24□□□□□ -0.13
CDK5RAP3-204ENST00000577664 NBPF15Q8N660 670 aa14.24□□□□□ -0.13
CDK5RAP3-204ENST00000577664 STK31Q9BXU1 1019 aa14.24□□□□□ -0.13
CDK5RAP3-204ENST00000577664 CCDC88AQ3V6T2 1871 aa14.24□□□□□ -0.13
CDK5RAP3-204ENST00000577664 BCAR3O75815 825 aa14.23□□□□□ -0.13
CDK5RAP3-204ENST00000577664 ITGBL1O95965 494 aaPredicted RBP14.23□□□□□ -0.13
CDK5RAP3-204ENST00000577664 A1BGP04217 495 aa14.23□□□□□ -0.13
CDK5RAP3-204ENST00000577664 CHRNA5P30532 468 aa14.23□□□□□ -0.13
CDK5RAP3-204ENST00000577664 EIF5P55010 431 aaKnown RBP14.23□□□□□ -0.13
CDK5RAP3-204ENST00000577664 CHPF2Q9P2E5 772 aa14.23□□□□□ -0.13
CDK5RAP3-204ENST00000577664 RTCBQ9Y3I0 505 aaKnown RBP14.23□□□□□ -0.13
CDK5RAP3-204ENST00000577664 PTPRCP08575 1304 aa14.22□□□□□ -0.13
CDK5RAP3-204ENST00000577664 WDR33Q9C0J8 1336 aaKnown RBP14.22□□□□□ -0.13
CDK5RAP3-204ENST00000577664 RGL2O15211 777 aa14.22□□□□□ -0.13
CDK5RAP3-204ENST00000577664 CRKLP46109 303 aaKnown RBP14.22□□□□□ -0.13
CDK5RAP3-204ENST00000577664 DEFB115Q30KQ5 88 aa14.22□□□□□ -0.13
CDK5RAP3-204ENST00000577664 ARHGEF1Q92888 912 aaKnown RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms