RNA–Protein interactions for RNA: ENST00000577052.5

ABR-236, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4

Gene ABR, Length 617 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-236ENST00000577052 PRKAR2BP31323 418 aa22.91■■□□□ 1.26
ABR-236ENST00000577052 COL13A1Q5TAT6 717 aaPredicted RBP22.91■■□□□ 1.26
ABR-236ENST00000577052 FMNL2Q96PY5 1086 aa22.91■■□□□ 1.26
ABR-236ENST00000577052 MRS2Q9HD23 443 aa22.91■■□□□ 1.26
ABR-236ENST00000577052 CACNA1SQ13698 1873 aa22.91■■□□□ 1.26
ABR-236ENST00000577052 PDE6BP35913 854 aa22.89■■□□□ 1.25
ABR-236ENST00000577052 BTBD11A6QL63 1104 aa22.88■■□□□ 1.25
ABR-236ENST00000577052 ARFGEF2Q9Y6D5 1785 aa22.88■■□□□ 1.25
ABR-236ENST00000577052 SRGNP10124 158 aa22.86■■□□□ 1.25
ABR-236ENST00000577052 DZIP3Q86Y13 1208 aaKnown RBP22.86■■□□□ 1.25
ABR-236ENST00000577052 SETDB2Q96T68 719 aa22.86■■□□□ 1.25
ABR-236ENST00000577052 ERFEQ4G0M1 354 aa22.85■■□□□ 1.25
ABR-236ENST00000577052 MCM10Q7L590 875 aa22.85■■□□□ 1.25
ABR-236ENST00000577052 CNBD1Q8NA66 436 aa22.85■■□□□ 1.25
ABR-236ENST00000577052 PDZRN3Q9UPQ7 1066 aa22.85■■□□□ 1.25
ABR-236ENST00000577052 LTBP3Q9NS15 1303 aa22.84■■□□□ 1.25
ABR-236ENST00000577052 NBPF26B4DH59 902 aa22.84■■□□□ 1.25
ABR-236ENST00000577052 POTEIP0CG38 1075 aa22.84■■□□□ 1.25
ABR-236ENST00000577052 POTEJP0CG39 1038 aa22.84■■□□□ 1.25
ABR-236ENST00000577052 STYK1Q6J9G0 422 aa22.84■■□□□ 1.25
ABR-236ENST00000577052 PRPF40BQ6NWY9 871 aaKnown RBP22.84■■□□□ 1.25
ABR-236ENST00000577052 NBPF10Q6P3W6 841 aaKnown RBP22.84■■□□□ 1.25
ABR-236ENST00000577052 NBPF15Q8N660 670 aa22.84■■□□□ 1.25
ABR-236ENST00000577052 C7orf43Q8WVR3 580 aa22.84■■□□□ 1.25
ABR-236ENST00000577052 DCTN1Q14203 1278 aa22.83■■□□□ 1.25
ABR-236ENST00000577052 DDNO94850 711 aaPredicted RBP22.82■■□□□ 1.24
ABR-236ENST00000577052 TAOK3Q9H2K8 898 aa22.82■■□□□ 1.24
ABR-236ENST00000577052 CNKSR1Q969H4 720 aa22.81■■□□□ 1.24
ABR-236ENST00000577052 MASTLQ96GX5 879 aa22.81■■□□□ 1.24
ABR-236ENST00000577052 DPY19L2Q6NUT2 758 aa22.8■■□□□ 1.24
ABR-236ENST00000577052 SNRPA1P09661 255 aaKnown RBP22.79■■□□□ 1.24
ABR-236ENST00000577052 ST5P78524 1137 aa22.79■■□□□ 1.24
ABR-236ENST00000577052 OLFM4Q6UX06 510 aa22.79■■□□□ 1.24
ABR-236ENST00000577052 KLRG2A4D1S0 409 aaPredicted RBP22.78■■□□□ 1.24
ABR-236ENST00000577052 U2AF1L5P0DN76 240 aaPredicted RBP22.78■■□□□ 1.24
ABR-236ENST00000577052 U2AF1Q01081 240 aaKnown RBP eCLIP22.78■■□□□ 1.24
ABR-236ENST00000577052 CLEC4GQ6UXB4 293 aa22.78■■□□□ 1.24
ABR-236ENST00000577052 PNISRQ8TF01 805 aaKnown RBP22.78■■□□□ 1.24
ABR-236ENST00000577052 CFAP53Q96M91 514 aa22.78■■□□□ 1.24
ABR-236ENST00000577052 HSPA1AP0DMV8 641 aaKnown RBP22.77■■□□□ 1.24
ABR-236ENST00000577052 HSPA1BP0DMV9 641 aaKnown RBP22.77■■□□□ 1.24
ABR-236ENST00000577052 NBPF5PQ86XG9 351 aaPredicted RBP22.77■■□□□ 1.24
ABR-236ENST00000577052 HLFQ16534 295 aa22.76■■□□□ 1.23
ABR-236ENST00000577052 MIS18AQ9NYP9 233 aa22.76■■□□□ 1.23
ABR-236ENST00000577052 NPM2Q86SE8 214 aaKnown RBP22.75■■□□□ 1.23
ABR-236ENST00000577052 NPHP1O15259 732 aa22.74■■□□□ 1.23
ABR-236ENST00000577052 CHADLQ6NUI6 762 aa22.74■■□□□ 1.23
ABR-236ENST00000577052 NIP7Q9Y221 180 aaKnown RBP eCLIP22.74■■□□□ 1.23
ABR-236ENST00000577052 NUDCQ9Y266 331 aa22.74■■□□□ 1.23
ABR-236ENST00000577052 DLG5Q8TDM6 1919 aa22.74■■□□□ 1.23
ABR-236ENST00000577052 NPR1P16066 1061 aa22.73■■□□□ 1.23
ABR-236ENST00000577052 FAM9BQ8IZU0 186 aa22.73■■□□□ 1.23
ABR-236ENST00000577052 RTF1Q92541 710 aaKnown RBP22.73■■□□□ 1.23
ABR-236ENST00000577052 ZNF541Q9H0D2 1346 aa22.73■■□□□ 1.23
ABR-236ENST00000577052 LAMB4A4D0S4 1761 aa22.73■■□□□ 1.23
ABR-236ENST00000577052 SNED1Q8TER0 1413 aa22.73■■□□□ 1.23
ABR-236ENST00000577052 FAM177BA6PVY3 158 aa22.72■■□□□ 1.23
ABR-236ENST00000577052 L3MBTL3Q96JM7 780 aaPredicted RBP22.72■■□□□ 1.23
ABR-236ENST00000577052 ZNF277Q9NRM2 450 aaPredicted RBP22.72■■□□□ 1.23
ABR-236ENST00000577052 KDM3BQ7LBC6 1761 aa22.71■■□□□ 1.23
ABR-236ENST00000577052 HTATSF1O43719 755 aaKnown RBP22.71■■□□□ 1.23
ABR-236ENST00000577052 CCDC93Q567U6 631 aa22.71■■□□□ 1.23
ABR-236ENST00000577052 SOGA3Q5TF21 947 aa22.71■■□□□ 1.23
ABR-236ENST00000577052 YTHDC1Q96MU7 727 aaKnown RBP22.71■■□□□ 1.23
ABR-236ENST00000577052 ZNF652Q9Y2D9 606 aa22.71■■□□□ 1.23
ABR-236ENST00000577052 PASKQ96RG2 1323 aa22.71■■□□□ 1.23
ABR-236ENST00000577052 SCN4AP35499 1836 aa22.71■■□□□ 1.23
ABR-236ENST00000577052 RGL2O15211 777 aa22.7■■□□□ 1.22
ABR-236ENST00000577052 FKBP4Q02790 459 aaKnown RBP eCLIP22.7■■□□□ 1.22
ABR-236ENST00000577052 TAF7Q15545 349 aaPredicted RBP22.7■■□□□ 1.22
ABR-236ENST00000577052 SLC51AQ86UW1 340 aa22.7■■□□□ 1.22
ABR-236ENST00000577052 TNS4Q8IZW8 715 aa22.7■■□□□ 1.22
ABR-236ENST00000577052 TAF1DQ9H5J8 278 aaPredicted RBP22.7■■□□□ 1.22
ABR-236ENST00000577052 CREBZFQ9NS37 354 aa22.7■■□□□ 1.22
ABR-236ENST00000577052 ABCC12Q96J65 1359 aa22.7■■□□□ 1.22
ABR-236ENST00000577052 ADAMTSL1Q8N6G6 1762 aa22.69■■□□□ 1.22
ABR-236ENST00000577052 CAPN15O75808 1086 aa22.69■■□□□ 1.22
ABR-236ENST00000577052 TPTE2Q6XPS3 522 aa22.69■■□□□ 1.22
ABR-236ENST00000577052 MKRN1Q9UHC7 482 aaKnown RBP22.69■■□□□ 1.22
ABR-236ENST00000577052 NUP98P52948 1817 aa22.68■■□□□ 1.22
ABR-236ENST00000577052 COL4A5P29400 1685 aa22.68■■□□□ 1.22
ABR-236ENST00000577052 ITGBL1O95965 494 aaPredicted RBP22.66■■□□□ 1.22
ABR-236ENST00000577052 NUTM1Q86Y26 1132 aa22.66■■□□□ 1.22
ABR-236ENST00000577052 PLEKHF1Q96S99 279 aa22.66■■□□□ 1.22
ABR-236ENST00000577052 THUMPD2Q9BTF0 503 aaKnown RBP22.66■■□□□ 1.22
ABR-236ENST00000577052 CRY2Q49AN0 593 aa22.65■■□□□ 1.22
ABR-236ENST00000577052 TTLL7Q6ZT98 887 aa22.65■■□□□ 1.22
ABR-236ENST00000577052 LDHDQ86WU2 507 aa22.65■■□□□ 1.22
ABR-236ENST00000577052 NGEFQ8N5V2 710 aa22.65■■□□□ 1.22
ABR-236ENST00000577052 FZD9O00144 591 aa22.64■■□□□ 1.21
ABR-236ENST00000577052 EIF4A1P60842 406 aaKnown RBP22.64■■□□□ 1.21
ABR-236ENST00000577052 SYNE4Q8N205 404 aa22.64■■□□□ 1.21
ABR-236ENST00000577052 CNTNAP1P78357 1384 aa22.63■■□□□ 1.21
ABR-236ENST00000577052 UBN2Q6ZU65 1347 aa22.63■■□□□ 1.21
ABR-236ENST00000577052 IQCA1LA6NCM1 817 aa22.63■■□□□ 1.21
ABR-236ENST00000577052 IARSP41252 1262 aaKnown RBP22.63■■□□□ 1.21
ABR-236ENST00000577052 WDR43Q15061 677 aaKnown RBP eCLIP22.63■■□□□ 1.21
ABR-236ENST00000577052 LTBP1Q14766 1721 aa22.62■■□□□ 1.21
ABR-236ENST00000577052 MAP3K15Q6ZN16 1313 aa22.62■■□□□ 1.21
ABR-236ENST00000577052 RTKN2Q8IZC4 609 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms