RNA–Protein interactions for RNA: ENST00000576616.5

SLC12A4-219, Transcript of solute carrier family 12 member 4, humanhuman

TSL 2 BASIC

Gene SLC12A4, Length 3,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-219ENST00000576616 LINS1Q8NG48 757 aa13.6□□□□□ -0.23
SLC12A4-219ENST00000576616 DDX21Q9NR30 783 aaKnown RBP eCLIP13.6□□□□□ -0.23
SLC12A4-219ENST00000576616 USP16Q9Y5T5 823 aa13.6□□□□□ -0.23
SLC12A4-219ENST00000576616 GLRX3O76003 335 aaKnown RBP13.59□□□□□ -0.23
SLC12A4-219ENST00000576616 CWC22Q9HCG8 908 aaKnown RBP13.59□□□□□ -0.23
SLC12A4-219ENST00000576616 CEMIPQ8WUJ3 1361 aa13.59□□□□□ -0.23
SLC12A4-219ENST00000576616 PTMSP20962 102 aa13.59□□□□□ -0.23
SLC12A4-219ENST00000576616 SUCLG2Q96I99 432 aa13.59□□□□□ -0.23
SLC12A4-219ENST00000576616 GRPEL1Q9HAV7 217 aa13.59□□□□□ -0.23
SLC12A4-219ENST00000576616 MRE11P49959 708 aa13.59□□□□□ -0.23
SLC12A4-219ENST00000576616 RUFY2Q8WXA3 655 aa13.59□□□□□ -0.23
SLC12A4-219ENST00000576616 ALDH1L1O75891 902 aa13.58□□□□□ -0.23
SLC12A4-219ENST00000576616 ANKRD13DQ6ZTN6 518 aa13.58□□□□□ -0.23
SLC12A4-219ENST00000576616 UBE3BQ7Z3V4 1068 aa13.58□□□□□ -0.23
SLC12A4-219ENST00000576616 FSD1Q9BTV5 496 aa13.58□□□□□ -0.23
SLC12A4-219ENST00000576616 SLC52A2Q9HAB3 445 aa13.58□□□□□ -0.23
SLC12A4-219ENST00000576616 ECHDC1Q9NTX5 307 aa13.58□□□□□ -0.23
SLC12A4-219ENST00000576616 NPHP3Q7Z494 1330 aa13.58□□□□□ -0.24
SLC12A4-219ENST00000576616 CPA1P15085 419 aa13.58□□□□□ -0.24
SLC12A4-219ENST00000576616 ERC1Q8IUD2 1116 aa13.58□□□□□ -0.24
SLC12A4-219ENST00000576616 STAP2Q9UGK3 403 aa13.57□□□□□ -0.24
SLC12A4-219ENST00000576616 PHKG2P15735 406 aa13.57□□□□□ -0.24
SLC12A4-219ENST00000576616 SNRPA1P09661 255 aaKnown RBP13.57□□□□□ -0.24
SLC12A4-219ENST00000576616 PRPF40BQ6NWY9 871 aaKnown RBP13.57□□□□□ -0.24
SLC12A4-219ENST00000576616 IL25Q9H293 177 aa13.57□□□□□ -0.24
SLC12A4-219ENST00000576616 ADCY9O60503 1353 aa13.57□□□□□ -0.24
SLC12A4-219ENST00000576616 KAT6BQ8WYB5 2073 aa13.56□□□□□ -0.24
SLC12A4-219ENST00000576616 MCM2P49736 904 aa13.56□□□□□ -0.24
SLC12A4-219ENST00000576616 POLA2Q14181 598 aa13.56□□□□□ -0.24
SLC12A4-219ENST00000576616 NEUROD6Q96NK8 337 aa13.56□□□□□ -0.24
SLC12A4-219ENST00000576616 FMNL2Q96PY5 1086 aa13.56□□□□□ -0.24
SLC12A4-219ENST00000576616 A0A087WZG4 1122 aa13.56□□□□□ -0.24
SLC12A4-219ENST00000576616 CASTP20810 708 aaKnown RBP13.56□□□□□ -0.24
SLC12A4-219ENST00000576616 DHX37Q8IY37 1157 aaKnown RBP13.56□□□□□ -0.24
SLC12A4-219ENST00000576616 DNAJC2Q99543 621 aaKnown RBP13.56□□□□□ -0.24
SLC12A4-219ENST00000576616 DDIT3P35638 169 aa13.55□□□□□ -0.24
SLC12A4-219ENST00000576616 GDPD2Q9HCC8 539 aa13.55□□□□□ -0.24
SLC12A4-219ENST00000576616 JAKMIP1Q96N16 626 aaKnown RBP13.55□□□□□ -0.24
SLC12A4-219ENST00000576616 ZKSCAN1P17029 563 aaPredicted RBP13.55□□□□□ -0.24
SLC12A4-219ENST00000576616 PXDNQ92626 1479 aa13.55□□□□□ -0.24
SLC12A4-219ENST00000576616 PI4K2BQ8TCG2 481 aa13.54□□□□□ -0.24
SLC12A4-219ENST00000576616 CCDC85AQ96PX6 553 aaPredicted RBP13.54□□□□□ -0.24
SLC12A4-219ENST00000576616 ZBTB3Q9H5J0 574 aa13.54□□□□□ -0.24
SLC12A4-219ENST00000576616 NALCNQ8IZF0 1738 aa13.54□□□□□ -0.24
SLC12A4-219ENST00000576616 ADAMTS2O95450 1211 aa13.54□□□□□ -0.24
SLC12A4-219ENST00000576616 DCAF5Q96JK2 942 aa13.54□□□□□ -0.24
SLC12A4-219ENST00000576616 RBM27Q9P2N5 1060 aaKnown RBP13.54□□□□□ -0.24
SLC12A4-219ENST00000576616 XRN1Q8IZH2 1706 aaKnown RBP13.54□□□□□ -0.24
SLC12A4-219ENST00000576616 C1orf167Q5SNV9 1468 aa13.54□□□□□ -0.24
SLC12A4-219ENST00000576616 SGSM2O43147 1006 aa13.54□□□□□ -0.24
SLC12A4-219ENST00000576616 NDUFB9Q9Y6M9 179 aa13.54□□□□□ -0.24
SLC12A4-219ENST00000576616 RGPD1P0DJD0 1748 aa13.54□□□□□ -0.24
SLC12A4-219ENST00000576616 FMN2Q9NZ56 1722 aa13.54□□□□□ -0.24
SLC12A4-219ENST00000576616 CYP27B1O15528 508 aa13.53□□□□□ -0.24
SLC12A4-219ENST00000576616 EAF2Q96CJ1 260 aaPredicted RBP13.53□□□□□ -0.24
SLC12A4-219ENST00000576616 NAP1L2Q9ULW6 460 aaPredicted RBP13.53□□□□□ -0.24
SLC12A4-219ENST00000576616 GAS2L3Q86XJ1 694 aa13.53□□□□□ -0.24
SLC12A4-219ENST00000576616 BBXQ8WY36 941 aaPredicted RBP13.53□□□□□ -0.24
SLC12A4-219ENST00000576616 SYTL4Q96C24 671 aaPredicted RBP13.53□□□□□ -0.24
SLC12A4-219ENST00000576616 TCEANC2Q96MN5 208 aa13.53□□□□□ -0.24
SLC12A4-219ENST00000576616 SMC3Q9UQE7 1217 aa13.53□□□□□ -0.24
SLC12A4-219ENST00000576616 SALL3Q9BXA9 1300 aa13.53□□□□□ -0.24
SLC12A4-219ENST00000576616 GCKRQ14397 625 aa13.52□□□□□ -0.24
SLC12A4-219ENST00000576616 EDC3Q96F86 508 aaKnown RBP13.52□□□□□ -0.24
SLC12A4-219ENST00000576616 IGKV5-2P06315 115 aa13.52□□□□□ -0.25
SLC12A4-219ENST00000576616 ANAPC15P60006 121 aa13.52□□□□□ -0.25
SLC12A4-219ENST00000576616 MEX3CQ5U5Q3 659 aaKnown RBP13.52□□□□□ -0.25
SLC12A4-219ENST00000576616 RASEFQ8IZ41 740 aa13.52□□□□□ -0.25
SLC12A4-219ENST00000576616 TLR7Q9NYK1 1049 aaKnown RBP13.52□□□□□ -0.25
SLC12A4-219ENST00000576616 AK9Q5TCS8 1911 aa13.52□□□□□ -0.25
SLC12A4-219ENST00000576616 LMTK3Q96Q04 1460 aa13.52□□□□□ -0.25
SLC12A4-219ENST00000576616 NEURL1BA8MQ27 555 aa13.52□□□□□ -0.25
SLC12A4-219ENST00000576616 FAM227BQ96M60 508 aa13.52□□□□□ -0.25
SLC12A4-219ENST00000576616 NWD1Q149M9 1564 aa13.51□□□□□ -0.25
SLC12A4-219ENST00000576616 CDK11BP21127 795 aaKnown RBP13.51□□□□□ -0.25
SLC12A4-219ENST00000576616 ZCRB1Q8TBF4 217 aaKnown RBP13.51□□□□□ -0.25
SLC12A4-219ENST00000576616 NCOA3Q9Y6Q9 1424 aa13.51□□□□□ -0.25
SLC12A4-219ENST00000576616 NASPP49321 788 aaPredicted RBP13.51□□□□□ -0.25
SLC12A4-219ENST00000576616 KLHL40Q2TBA0 621 aa13.51□□□□□ -0.25
SLC12A4-219ENST00000576616 CCDC83Q8IWF9 413 aa13.51□□□□□ -0.25
SLC12A4-219ENST00000576616 RNF214Q8ND24 703 aa13.51□□□□□ -0.25
SLC12A4-219ENST00000576616 EVI5LQ96CN4 794 aa13.51□□□□□ -0.25
SLC12A4-219ENST00000576616 METTL22Q9BUU2 404 aaPredicted RBP13.51□□□□□ -0.25
SLC12A4-219ENST00000576616 TAOK2Q9UL54 1235 aa13.51□□□□□ -0.25
SLC12A4-219ENST00000576616 SNX14Q9Y5W7 946 aa13.51□□□□□ -0.25
SLC12A4-219ENST00000576616 TTC41PQ6P2S7 1318 aa13.51□□□□□ -0.25
SLC12A4-219ENST00000576616 VPS37CA5D8V6 355 aaPredicted RBP13.51□□□□□ -0.25
SLC12A4-219ENST00000576616 A1BGP04217 495 aa13.51□□□□□ -0.25
SLC12A4-219ENST00000576616 HSPA4P34932 840 aa13.51□□□□□ -0.25
SLC12A4-219ENST00000576616 PTH1RQ03431 593 aa13.51□□□□□ -0.25
SLC12A4-219ENST00000576616 EPHA10Q5JZY3 1008 aa13.51□□□□□ -0.25
SLC12A4-219ENST00000576616 LMBR1LQ6UX01 489 aa13.5□□□□□ -0.25
SLC12A4-219ENST00000576616 PDRG1Q9NUG6 133 aa13.5□□□□□ -0.25
SLC12A4-219ENST00000576616 CYP46A1Q9Y6A2 500 aa13.5□□□□□ -0.25
SLC12A4-219ENST00000576616 AOX1Q06278 1338 aa13.5□□□□□ -0.25
SLC12A4-219ENST00000576616 SASH1O94885 1247 aa13.5□□□□□ -0.25
SLC12A4-219ENST00000576616 AK2P54819 239 aa13.5□□□□□ -0.25
SLC12A4-219ENST00000576616 GORABQ5T7V8 394 aa13.5□□□□□ -0.25
SLC12A4-219ENST00000576616 NMIQ13287 307 aaPredicted RBP13.5□□□□□ -0.25
SLC12A4-219ENST00000576616 PDIA6Q15084 440 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms